Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03089 and MPMX19_03090 overlap by 4 nucleotides MPMX19_03090 and MPMX19_03091 are separated by 33 nucleotides MPMX19_03091 and MPMX19_03092 overlap by 4 nucleotides
MPMX19_03089: MPMX19_03089 - Macrolide export protein MacA, at 360,045 to 361,253
_03089
MPMX19_03090: MPMX19_03090 - Macrolide export ATP-binding/permease protein MacB, at 361,250 to 363,181
_03090
MPMX19_03091: MPMX19_03091 - hypothetical protein, at 363,215 to 364,087
_03091
MPMX19_03092: MPMX19_03092 - High-affinity zinc uptake system membrane protein ZnuB, at 364,084 to 364,974
_03092
Position (kb)
361
362
363
364 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 360.492 kb on + strand, within MPMX19_03089 at 360.493 kb on - strand, within MPMX19_03089 at 360.493 kb on - strand, within MPMX19_03089 at 360.493 kb on - strand, within MPMX19_03089 at 360.604 kb on - strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.615 kb on + strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.616 kb on - strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.681 kb on + strand, within MPMX19_03089 at 360.682 kb on - strand, within MPMX19_03089 at 360.682 kb on - strand, within MPMX19_03089 at 360.786 kb on + strand, within MPMX19_03089 at 360.786 kb on + strand, within MPMX19_03089 at 360.786 kb on + strand, within MPMX19_03089 at 360.786 kb on + strand, within MPMX19_03089 at 360.786 kb on + strand, within MPMX19_03089 at 360.787 kb on - strand, within MPMX19_03089 at 360.787 kb on - strand, within MPMX19_03089 at 360.787 kb on - strand, within MPMX19_03089 at 360.787 kb on - strand, within MPMX19_03089 at 360.787 kb on - strand, within MPMX19_03089 at 360.933 kb on + strand, within MPMX19_03089 at 360.933 kb on + strand, within MPMX19_03089 at 360.933 kb on + strand, within MPMX19_03089 at 360.933 kb on + strand, within MPMX19_03089 at 360.934 kb on - strand, within MPMX19_03089 at 360.934 kb on - strand, within MPMX19_03089 at 360.934 kb on - strand, within MPMX19_03089 at 360.934 kb on - strand, within MPMX19_03089 at 360.934 kb on - strand, within MPMX19_03089 at 361.292 kb on + strand at 361.292 kb on + strand at 361.292 kb on + strand at 361.292 kb on + strand at 361.292 kb on + strand at 361.293 kb on - strand at 361.293 kb on - strand at 361.293 kb on - strand at 361.293 kb on - strand at 361.293 kb on - strand at 361.293 kb on - strand at 361.538 kb on + strand, within MPMX19_03090 at 361.538 kb on + strand, within MPMX19_03090 at 361.538 kb on + strand, within MPMX19_03090 at 361.538 kb on + strand, within MPMX19_03090 at 361.538 kb on + strand, within MPMX19_03090 at 361.538 kb on + strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.539 kb on - strand, within MPMX19_03090 at 361.592 kb on + strand, within MPMX19_03090 at 361.593 kb on - strand, within MPMX19_03090 at 361.946 kb on - strand, within MPMX19_03090 at 361.981 kb on + strand, within MPMX19_03090 at 362.106 kb on + strand, within MPMX19_03090 at 362.106 kb on + strand, within MPMX19_03090 at 362.107 kb on - strand, within MPMX19_03090 at 362.107 kb on - strand, within MPMX19_03090 at 362.107 kb on - strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.183 kb on + strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.184 kb on - strand, within MPMX19_03090 at 362.288 kb on + strand, within MPMX19_03090 at 362.289 kb on - strand, within MPMX19_03090 at 363.179 kb on + strand at 363.180 kb on - strand at 363.180 kb on - strand at 363.399 kb on + strand, within MPMX19_03091 at 363.399 kb on + strand, within MPMX19_03091 at 363.399 kb on + strand, within MPMX19_03091 at 363.400 kb on - strand, within MPMX19_03091 at 363.801 kb on + strand, within MPMX19_03091
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 360,492 + MPMX19_03089 0.37 -0.8 360,493 - MPMX19_03089 0.37 -0.8 360,493 - MPMX19_03089 0.37 +0.8 360,493 - MPMX19_03089 0.37 -0.5 360,604 - MPMX19_03089 0.46 -1.4 360,615 + MPMX19_03089 0.47 +0.2 360,615 + MPMX19_03089 0.47 -0.2 360,615 + MPMX19_03089 0.47 -0.2 360,615 + MPMX19_03089 0.47 -0.1 360,615 + MPMX19_03089 0.47 -0.9 360,615 + MPMX19_03089 0.47 -0.2 360,615 + MPMX19_03089 0.47 +0.2 360,615 + MPMX19_03089 0.47 -0.4 360,616 - MPMX19_03089 0.47 -0.9 360,616 - MPMX19_03089 0.47 -0.7 360,616 - MPMX19_03089 0.47 +0.3 360,616 - MPMX19_03089 0.47 +1.0 360,616 - MPMX19_03089 0.47 +0.6 360,616 - MPMX19_03089 0.47 -0.6 360,616 - MPMX19_03089 0.47 -0.6 360,616 - MPMX19_03089 0.47 +1.6 360,616 - MPMX19_03089 0.47 -0.1 360,616 - MPMX19_03089 0.47 +0.2 360,681 + MPMX19_03089 0.53 +0.3 360,681 + MPMX19_03089 0.53 +0.4 360,681 + MPMX19_03089 0.53 +0.3 360,681 + MPMX19_03089 0.53 -2.8 360,681 + MPMX19_03089 0.53 -1.2 360,681 + MPMX19_03089 0.53 -1.8 360,682 - MPMX19_03089 0.53 -0.3 360,682 - MPMX19_03089 0.53 -0.2 360,786 + MPMX19_03089 0.61 +1.2 360,786 + MPMX19_03089 0.61 -1.9 360,786 + MPMX19_03089 0.61 +0.0 360,786 + MPMX19_03089 0.61 +0.2 360,786 + MPMX19_03089 0.61 -0.2 360,787 - MPMX19_03089 0.61 +0.8 360,787 - MPMX19_03089 0.61 +1.4 360,787 - MPMX19_03089 0.61 -1.6 360,787 - MPMX19_03089 0.61 -0.4 360,787 - MPMX19_03089 0.61 +0.4 360,933 + MPMX19_03089 0.73 -0.4 360,933 + MPMX19_03089 0.73 -0.6 360,933 + MPMX19_03089 0.73 -1.1 360,933 + MPMX19_03089 0.73 -0.2 360,934 - MPMX19_03089 0.74 -0.4 360,934 - MPMX19_03089 0.74 +0.8 360,934 - MPMX19_03089 0.74 -0.4 360,934 - MPMX19_03089 0.74 -1.4 360,934 - MPMX19_03089 0.74 -0.7 361,292 + -0.2 361,292 + -0.1 361,292 + -0.1 361,292 + +0.4 361,292 + +0.4 361,293 - -2.2 361,293 - -0.2 361,293 - -0.0 361,293 - -1.8 361,293 - -0.7 361,293 - -0.8 361,538 + MPMX19_03090 0.15 -1.1 361,538 + MPMX19_03090 0.15 +0.6 361,538 + MPMX19_03090 0.15 +0.2 361,538 + MPMX19_03090 0.15 +0.9 361,538 + MPMX19_03090 0.15 -0.4 361,538 + MPMX19_03090 0.15 -0.2 361,539 - MPMX19_03090 0.15 -1.7 361,539 - MPMX19_03090 0.15 +0.3 361,539 - MPMX19_03090 0.15 +0.6 361,539 - MPMX19_03090 0.15 -1.2 361,539 - MPMX19_03090 0.15 +0.2 361,539 - MPMX19_03090 0.15 +1.2 361,539 - MPMX19_03090 0.15 +0.2 361,539 - MPMX19_03090 0.15 +0.3 361,539 - MPMX19_03090 0.15 -0.6 361,592 + MPMX19_03090 0.18 +1.0 361,593 - MPMX19_03090 0.18 +0.5 361,946 - MPMX19_03090 0.36 -0.5 361,981 + MPMX19_03090 0.38 +0.4 362,106 + MPMX19_03090 0.44 +0.4 362,106 + MPMX19_03090 0.44 +0.2 362,107 - MPMX19_03090 0.44 +0.2 362,107 - MPMX19_03090 0.44 +0.2 362,107 - MPMX19_03090 0.44 +0.4 362,183 + MPMX19_03090 0.48 -1.2 362,183 + MPMX19_03090 0.48 -0.6 362,183 + MPMX19_03090 0.48 -0.9 362,183 + MPMX19_03090 0.48 -0.1 362,183 + MPMX19_03090 0.48 +0.8 362,183 + MPMX19_03090 0.48 +0.1 362,183 + MPMX19_03090 0.48 +0.0 362,183 + MPMX19_03090 0.48 +0.2 362,183 + MPMX19_03090 0.48 +2.2 362,183 + MPMX19_03090 0.48 +0.4 362,183 + MPMX19_03090 0.48 -0.2 362,184 - MPMX19_03090 0.48 +0.9 362,184 - MPMX19_03090 0.48 +0.9 362,184 - MPMX19_03090 0.48 -1.8 362,184 - MPMX19_03090 0.48 +0.4 362,184 - MPMX19_03090 0.48 -0.2 362,184 - MPMX19_03090 0.48 -0.8 362,184 - MPMX19_03090 0.48 +0.8 362,184 - MPMX19_03090 0.48 +0.9 362,184 - MPMX19_03090 0.48 -0.7 362,288 + MPMX19_03090 0.54 +0.2 362,289 - MPMX19_03090 0.54 -0.6 363,179 + -1.1 363,180 - -0.5 363,180 - -1.9 363,399 + MPMX19_03091 0.21 -2.1 363,399 + MPMX19_03091 0.21 -0.5 363,399 + MPMX19_03091 0.21 -0.2 363,400 - MPMX19_03091 0.21 -1.6 363,801 + MPMX19_03091 0.67 -0.2
Or see this region's nucleotide sequence