Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03075 and MPMX19_03076 overlap by 4 nucleotides MPMX19_03076 and MPMX19_03077 are separated by 440 nucleotides
MPMX19_03075: MPMX19_03075 - hypothetical protein, at 340,888 to 342,252
_03075
MPMX19_03076: MPMX19_03076 - hypothetical protein, at 342,249 to 343,586
_03076
MPMX19_03077: MPMX19_03077 - N-acetylglucosamine-6-O-sulfatase, at 344,027 to 346,069
_03077
Position (kb) 342
343
344 Strain fitness (log2 ratio) -2
-1
0
1
2 at 341.333 kb on + strand, within MPMX19_03075 at 341.333 kb on + strand, within MPMX19_03075 at 341.333 kb on + strand, within MPMX19_03075 at 341.333 kb on + strand, within MPMX19_03075 at 341.334 kb on - strand, within MPMX19_03075 at 341.334 kb on - strand, within MPMX19_03075 at 341.334 kb on - strand, within MPMX19_03075 at 341.334 kb on - strand, within MPMX19_03075 at 341.388 kb on + strand, within MPMX19_03075 at 341.389 kb on - strand, within MPMX19_03075 at 341.873 kb on + strand, within MPMX19_03075 at 341.873 kb on + strand, within MPMX19_03075 at 341.873 kb on + strand, within MPMX19_03075 at 341.873 kb on + strand, within MPMX19_03075 at 341.874 kb on - strand, within MPMX19_03075 at 341.874 kb on - strand, within MPMX19_03075 at 342.494 kb on + strand, within MPMX19_03076 at 342.494 kb on + strand, within MPMX19_03076 at 342.495 kb on - strand, within MPMX19_03076 at 342.495 kb on - strand, within MPMX19_03076 at 342.625 kb on + strand, within MPMX19_03076 at 342.625 kb on + strand, within MPMX19_03076 at 342.625 kb on + strand, within MPMX19_03076 at 342.626 kb on - strand, within MPMX19_03076 at 342.631 kb on + strand, within MPMX19_03076 at 342.631 kb on + strand, within MPMX19_03076 at 342.631 kb on + strand, within MPMX19_03076 at 342.631 kb on + strand, within MPMX19_03076 at 342.631 kb on + strand, within MPMX19_03076 at 342.632 kb on - strand, within MPMX19_03076 at 342.632 kb on - strand, within MPMX19_03076 at 342.632 kb on - strand, within MPMX19_03076 at 342.632 kb on - strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.688 kb on + strand, within MPMX19_03076 at 342.689 kb on - strand, within MPMX19_03076 at 342.689 kb on - strand, within MPMX19_03076 at 342.689 kb on - strand, within MPMX19_03076 at 342.689 kb on - strand, within MPMX19_03076 at 342.689 kb on - strand, within MPMX19_03076 at 343.045 kb on + strand, within MPMX19_03076 at 343.045 kb on + strand, within MPMX19_03076 at 343.045 kb on + strand, within MPMX19_03076 at 343.046 kb on - strand, within MPMX19_03076 at 343.339 kb on + strand, within MPMX19_03076 at 343.454 kb on - strand at 343.625 kb on - strand at 343.636 kb on + strand at 343.637 kb on - strand at 343.637 kb on - strand at 343.637 kb on - strand at 343.638 kb on + strand at 343.639 kb on - strand at 343.639 kb on - strand at 343.639 kb on - strand at 343.836 kb on + strand at 343.884 kb on + strand at 343.884 kb on + strand at 343.916 kb on + strand at 344.099 kb on + strand at 344.100 kb on - strand at 344.100 kb on - strand at 344.120 kb on + strand at 344.121 kb on - strand at 344.201 kb on + strand at 344.202 kb on - strand at 344.202 kb on - strand at 344.202 kb on - strand at 344.442 kb on - strand, within MPMX19_03077 at 344.453 kb on + strand, within MPMX19_03077 at 344.531 kb on + strand, within MPMX19_03077 at 344.532 kb on - strand, within MPMX19_03077 at 344.532 kb on - strand, within MPMX19_03077
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 341,333 + MPMX19_03075 0.33 +1.3 341,333 + MPMX19_03075 0.33 -0.0 341,333 + MPMX19_03075 0.33 +0.8 341,333 + MPMX19_03075 0.33 -1.0 341,334 - MPMX19_03075 0.33 +0.3 341,334 - MPMX19_03075 0.33 -1.2 341,334 - MPMX19_03075 0.33 -1.0 341,334 - MPMX19_03075 0.33 -0.4 341,388 + MPMX19_03075 0.37 +1.3 341,389 - MPMX19_03075 0.37 +0.2 341,873 + MPMX19_03075 0.72 -0.2 341,873 + MPMX19_03075 0.72 -0.5 341,873 + MPMX19_03075 0.72 -1.6 341,873 + MPMX19_03075 0.72 -2.0 341,874 - MPMX19_03075 0.72 -1.7 341,874 - MPMX19_03075 0.72 -0.4 342,494 + MPMX19_03076 0.18 +0.2 342,494 + MPMX19_03076 0.18 -0.4 342,495 - MPMX19_03076 0.18 +1.2 342,495 - MPMX19_03076 0.18 -0.8 342,625 + MPMX19_03076 0.28 -1.7 342,625 + MPMX19_03076 0.28 -0.8 342,625 + MPMX19_03076 0.28 -1.3 342,626 - MPMX19_03076 0.28 +0.4 342,631 + MPMX19_03076 0.29 -1.0 342,631 + MPMX19_03076 0.29 +0.3 342,631 + MPMX19_03076 0.29 -1.0 342,631 + MPMX19_03076 0.29 -0.6 342,631 + MPMX19_03076 0.29 +2.0 342,632 - MPMX19_03076 0.29 -0.2 342,632 - MPMX19_03076 0.29 -1.0 342,632 - MPMX19_03076 0.29 -0.2 342,632 - MPMX19_03076 0.29 -0.2 342,688 + MPMX19_03076 0.33 +1.3 342,688 + MPMX19_03076 0.33 -0.1 342,688 + MPMX19_03076 0.33 -1.6 342,688 + MPMX19_03076 0.33 +0.1 342,688 + MPMX19_03076 0.33 -0.1 342,688 + MPMX19_03076 0.33 +0.6 342,689 - MPMX19_03076 0.33 +0.6 342,689 - MPMX19_03076 0.33 -0.6 342,689 - MPMX19_03076 0.33 +0.2 342,689 - MPMX19_03076 0.33 -0.9 342,689 - MPMX19_03076 0.33 -0.9 343,045 + MPMX19_03076 0.59 +0.6 343,045 + MPMX19_03076 0.59 -0.0 343,045 + MPMX19_03076 0.59 -0.4 343,046 - MPMX19_03076 0.60 -1.2 343,339 + MPMX19_03076 0.81 -2.2 343,454 - -0.2 343,625 - -0.1 343,636 + +0.4 343,637 - -0.4 343,637 - +0.2 343,637 - +0.7 343,638 + +0.2 343,639 - +0.5 343,639 - +0.9 343,639 - -1.7 343,836 + -1.5 343,884 + +1.4 343,884 + +1.0 343,916 + -0.9 344,099 + -0.7 344,100 - +0.0 344,100 - -0.8 344,120 + -0.7 344,121 - -0.1 344,201 + -0.5 344,202 - -0.2 344,202 - -0.3 344,202 - -0.8 344,442 - MPMX19_03077 0.20 +0.5 344,453 + MPMX19_03077 0.21 +0.3 344,531 + MPMX19_03077 0.25 -0.2 344,532 - MPMX19_03077 0.25 +0.5 344,532 - MPMX19_03077 0.25 +0.2
Or see this region's nucleotide sequence