Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02732 and MPMX19_02733 are separated by 221 nucleotides MPMX19_02733 and MPMX19_02734 are separated by 338 nucleotides MPMX19_02734 and MPMX19_02735 are separated by 30 nucleotides
MPMX19_02732: MPMX19_02732 - Coenzyme A biosynthesis bifunctional protein CoaBC, at 2,875,882 to 2,877,117
_02732
MPMX19_02733: MPMX19_02733 - Regulatory protein LuxO, at 2,877,339 to 2,878,754
_02733
MPMX19_02734: MPMX19_02734 - Cold shock-like protein CspE, at 2,879,093 to 2,879,302
_02734
MPMX19_02735: MPMX19_02735 - Sensor histidine kinase RcsC, at 2,879,333 to 2,880,217
_02735
Position (kb)
2877
2878
2879 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.172 kb on - strand at 2877.263 kb on + strand at 2877.264 kb on - strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.284 kb on + strand at 2877.285 kb on - strand at 2877.285 kb on - strand at 2877.285 kb on - strand at 2877.285 kb on - strand at 2877.285 kb on - strand at 2877.285 kb on - strand at 2877.291 kb on + strand at 2877.292 kb on - strand at 2877.292 kb on - strand at 2877.292 kb on - strand at 2877.298 kb on + strand at 2877.298 kb on + strand at 2877.298 kb on + strand at 2877.298 kb on + strand at 2877.298 kb on + strand at 2877.299 kb on - strand at 2877.299 kb on - strand at 2877.299 kb on - strand at 2877.299 kb on - strand at 2877.299 kb on - strand at 2877.316 kb on + strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.317 kb on - strand at 2877.400 kb on - strand at 2877.400 kb on - strand at 2877.408 kb on + strand at 2877.408 kb on + strand at 2877.408 kb on + strand at 2877.408 kb on + strand at 2877.409 kb on - strand at 2877.409 kb on - strand at 2877.630 kb on + strand, within MPMX19_02733 at 2877.639 kb on + strand, within MPMX19_02733 at 2877.640 kb on - strand, within MPMX19_02733 at 2877.640 kb on - strand, within MPMX19_02733 at 2877.762 kb on + strand, within MPMX19_02733 at 2877.762 kb on + strand, within MPMX19_02733 at 2877.804 kb on + strand, within MPMX19_02733 at 2877.804 kb on + strand, within MPMX19_02733 at 2877.804 kb on + strand, within MPMX19_02733 at 2877.804 kb on + strand, within MPMX19_02733 at 2877.805 kb on - strand, within MPMX19_02733 at 2877.805 kb on - strand, within MPMX19_02733 at 2877.805 kb on - strand, within MPMX19_02733 at 2877.805 kb on - strand, within MPMX19_02733 at 2877.805 kb on - strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.245 kb on + strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.246 kb on - strand, within MPMX19_02733 at 2878.248 kb on + strand, within MPMX19_02733 at 2878.248 kb on + strand, within MPMX19_02733 at 2878.248 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.326 kb on + strand, within MPMX19_02733 at 2878.327 kb on - strand, within MPMX19_02733 at 2878.327 kb on - strand, within MPMX19_02733 at 2878.327 kb on - strand, within MPMX19_02733 at 2878.327 kb on - strand, within MPMX19_02733 at 2878.404 kb on + strand, within MPMX19_02733 at 2878.404 kb on + strand, within MPMX19_02733 at 2878.405 kb on - strand, within MPMX19_02733 at 2878.405 kb on - strand, within MPMX19_02733 at 2878.405 kb on - strand, within MPMX19_02733 at 2878.531 kb on + strand, within MPMX19_02733 at 2878.532 kb on - strand, within MPMX19_02733 at 2878.532 kb on - strand, within MPMX19_02733 at 2878.532 kb on - strand, within MPMX19_02733 at 2878.713 kb on + strand at 2878.713 kb on + strand at 2878.714 kb on - strand at 2878.714 kb on - strand at 2878.714 kb on - strand at 2878.752 kb on + strand at 2878.752 kb on + strand at 2878.752 kb on + strand at 2878.752 kb on + strand at 2878.752 kb on + strand at 2878.753 kb on - strand at 2878.753 kb on - strand at 2878.799 kb on - strand at 2878.799 kb on - strand at 2878.807 kb on - strand at 2878.860 kb on + strand at 2878.860 kb on + strand at 2878.860 kb on + strand at 2878.860 kb on + strand at 2878.861 kb on - strand at 2878.861 kb on - strand at 2878.861 kb on - strand at 2878.892 kb on + strand at 2878.919 kb on + strand at 2878.920 kb on - strand at 2878.925 kb on + strand at 2878.925 kb on + strand at 2878.925 kb on + strand at 2878.926 kb on - strand at 2878.926 kb on - strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.077 kb on + strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.078 kb on - strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.079 kb on + strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.080 kb on - strand at 2879.104 kb on + strand at 2879.105 kb on - strand at 2879.109 kb on + strand at 2879.109 kb on + strand at 2879.109 kb on + strand at 2879.109 kb on + strand at 2879.109 kb on + strand at 2879.109 kb on + strand at 2879.110 kb on - strand at 2879.110 kb on - strand at 2879.110 kb on - strand at 2879.110 kb on - strand at 2879.110 kb on - strand at 2879.110 kb on - strand at 2879.328 kb on + strand at 2879.328 kb on + strand at 2879.328 kb on + strand at 2879.328 kb on + strand at 2879.328 kb on + strand at 2879.328 kb on + strand at 2879.329 kb on - strand at 2879.329 kb on - strand at 2879.329 kb on - strand at 2879.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,877,172 - -1.1 2,877,172 - -0.7 2,877,172 - -1.9 2,877,172 - -0.2 2,877,172 - +1.2 2,877,172 - +0.9 2,877,172 - -0.4 2,877,172 - -0.3 2,877,172 - -1.1 2,877,172 - -0.9 2,877,172 - +0.7 2,877,263 + -1.6 2,877,264 - -0.1 2,877,284 + +1.3 2,877,284 + -1.8 2,877,284 + -2.0 2,877,284 + -0.7 2,877,284 + -1.4 2,877,284 + +0.9 2,877,284 + +1.3 2,877,285 - -0.1 2,877,285 - +1.2 2,877,285 - -1.4 2,877,285 - +1.3 2,877,285 - -0.7 2,877,285 - -0.3 2,877,291 + +0.3 2,877,292 - +0.0 2,877,292 - -1.7 2,877,292 - +1.1 2,877,298 + -1.5 2,877,298 + -1.3 2,877,298 + -1.0 2,877,298 + +1.3 2,877,298 + +1.3 2,877,299 - +0.5 2,877,299 - +0.3 2,877,299 - -0.4 2,877,299 - +1.1 2,877,299 - -0.3 2,877,316 + -0.4 2,877,317 - -0.2 2,877,317 - +0.3 2,877,317 - -0.6 2,877,317 - -1.5 2,877,317 - +0.6 2,877,317 - +0.3 2,877,317 - +1.4 2,877,317 - -0.3 2,877,400 - -0.2 2,877,400 - -0.3 2,877,408 + +0.9 2,877,408 + +0.3 2,877,408 + +0.6 2,877,408 + +0.5 2,877,409 - -0.2 2,877,409 - +0.5 2,877,630 + MPMX19_02733 0.21 +0.5 2,877,639 + MPMX19_02733 0.21 -0.5 2,877,640 - MPMX19_02733 0.21 +1.7 2,877,640 - MPMX19_02733 0.21 -1.9 2,877,762 + MPMX19_02733 0.30 +0.1 2,877,762 + MPMX19_02733 0.30 +1.4 2,877,804 + MPMX19_02733 0.33 -0.7 2,877,804 + MPMX19_02733 0.33 -0.3 2,877,804 + MPMX19_02733 0.33 -0.3 2,877,804 + MPMX19_02733 0.33 -2.0 2,877,805 - MPMX19_02733 0.33 -0.4 2,877,805 - MPMX19_02733 0.33 -0.5 2,877,805 - MPMX19_02733 0.33 -1.6 2,877,805 - MPMX19_02733 0.33 +0.3 2,877,805 - MPMX19_02733 0.33 -0.1 2,878,245 + MPMX19_02733 0.64 +0.6 2,878,245 + MPMX19_02733 0.64 +0.0 2,878,245 + MPMX19_02733 0.64 -0.7 2,878,245 + MPMX19_02733 0.64 -0.4 2,878,245 + MPMX19_02733 0.64 -1.4 2,878,245 + MPMX19_02733 0.64 +1.6 2,878,245 + MPMX19_02733 0.64 -0.6 2,878,245 + MPMX19_02733 0.64 +0.1 2,878,246 - MPMX19_02733 0.64 +1.1 2,878,246 - MPMX19_02733 0.64 +0.1 2,878,246 - MPMX19_02733 0.64 -1.1 2,878,246 - MPMX19_02733 0.64 -0.9 2,878,246 - MPMX19_02733 0.64 -1.1 2,878,246 - MPMX19_02733 0.64 +0.3 2,878,246 - MPMX19_02733 0.64 +0.1 2,878,246 - MPMX19_02733 0.64 -0.4 2,878,248 + MPMX19_02733 0.64 +0.9 2,878,248 + MPMX19_02733 0.64 +1.9 2,878,248 + MPMX19_02733 0.64 -1.1 2,878,326 + MPMX19_02733 0.70 -0.1 2,878,326 + MPMX19_02733 0.70 +0.9 2,878,326 + MPMX19_02733 0.70 -0.7 2,878,326 + MPMX19_02733 0.70 -0.8 2,878,326 + MPMX19_02733 0.70 +0.7 2,878,326 + MPMX19_02733 0.70 +1.5 2,878,326 + MPMX19_02733 0.70 -0.6 2,878,327 - MPMX19_02733 0.70 +0.7 2,878,327 - MPMX19_02733 0.70 +1.4 2,878,327 - MPMX19_02733 0.70 +0.3 2,878,327 - MPMX19_02733 0.70 -1.2 2,878,404 + MPMX19_02733 0.75 +0.3 2,878,404 + MPMX19_02733 0.75 +0.3 2,878,405 - MPMX19_02733 0.75 -0.3 2,878,405 - MPMX19_02733 0.75 -1.4 2,878,405 - MPMX19_02733 0.75 +0.9 2,878,531 + MPMX19_02733 0.84 -0.6 2,878,532 - MPMX19_02733 0.84 -0.4 2,878,532 - MPMX19_02733 0.84 -0.9 2,878,532 - MPMX19_02733 0.84 -0.4 2,878,713 + +0.2 2,878,713 + -1.3 2,878,714 - -0.7 2,878,714 - -0.0 2,878,714 - +0.0 2,878,752 + -0.7 2,878,752 + +0.7 2,878,752 + +1.9 2,878,752 + +0.6 2,878,752 + -0.3 2,878,753 - -2.3 2,878,753 - +1.4 2,878,799 - -0.7 2,878,799 - -1.7 2,878,807 - +1.6 2,878,860 + +0.8 2,878,860 + -2.4 2,878,860 + -0.5 2,878,860 + +0.0 2,878,861 - -1.6 2,878,861 - +0.9 2,878,861 - -0.7 2,878,892 + -1.9 2,878,919 + -0.3 2,878,920 - +1.1 2,878,925 + -1.6 2,878,925 + -0.6 2,878,925 + -0.3 2,878,926 - -1.0 2,878,926 - -0.9 2,879,077 + -0.3 2,879,077 + +1.2 2,879,077 + -0.8 2,879,077 + -0.3 2,879,077 + -0.4 2,879,077 + -0.1 2,879,077 + +0.1 2,879,077 + -2.3 2,879,077 + -0.7 2,879,077 + +0.2 2,879,077 + -1.3 2,879,077 + -0.1 2,879,077 + -0.4 2,879,077 + -2.1 2,879,077 + -0.1 2,879,077 + -2.0 2,879,077 + -0.4 2,879,077 + -1.0 2,879,077 + -0.5 2,879,078 - +1.3 2,879,078 - -0.7 2,879,078 - +1.3 2,879,078 - +1.5 2,879,078 - -0.9 2,879,078 - +0.5 2,879,078 - -1.7 2,879,078 - -0.3 2,879,078 - +1.2 2,879,078 - +0.8 2,879,078 - +0.1 2,879,078 - -2.0 2,879,078 - -0.0 2,879,078 - -0.9 2,879,078 - -0.8 2,879,079 + -0.1 2,879,079 + -0.7 2,879,079 + -0.8 2,879,079 + +1.3 2,879,079 + -0.7 2,879,079 + -0.1 2,879,079 + -0.1 2,879,079 + -0.6 2,879,079 + +0.5 2,879,079 + -1.0 2,879,079 + -0.4 2,879,079 + -1.3 2,879,079 + +0.4 2,879,079 + +0.2 2,879,079 + +0.2 2,879,080 - +0.3 2,879,080 - -0.4 2,879,080 - +1.6 2,879,080 - +0.4 2,879,080 - +0.7 2,879,080 - -0.3 2,879,080 - +0.8 2,879,080 - -0.9 2,879,080 - -0.9 2,879,080 - -1.6 2,879,080 - +1.2 2,879,080 - +0.3 2,879,104 + +0.2 2,879,105 - -0.1 2,879,109 + +0.1 2,879,109 + +0.8 2,879,109 + -1.3 2,879,109 + +1.2 2,879,109 + -0.3 2,879,109 + +0.1 2,879,110 - -0.3 2,879,110 - +0.8 2,879,110 - +0.2 2,879,110 - -0.1 2,879,110 - +1.2 2,879,110 - +0.3 2,879,328 + -0.2 2,879,328 + -0.3 2,879,328 + -0.7 2,879,328 + -0.3 2,879,328 + -1.0 2,879,328 + +0.7 2,879,329 - -0.7 2,879,329 - +0.7 2,879,329 - -1.4 2,879,359 - -1.6
Or see this region's nucleotide sequence