Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02413 and MPMX19_02414 are separated by 78 nucleotides MPMX19_02414 and MPMX19_02415 are separated by 232 nucleotides MPMX19_02415 and MPMX19_02416 are separated by 65 nucleotides
MPMX19_02413: MPMX19_02413 - Dual-specificity RNA methyltransferase RlmN, at 2,533,026 to 2,534,195
_02413
MPMX19_02414: MPMX19_02414 - hypothetical protein, at 2,534,274 to 2,534,840
_02414
MPMX19_02415: MPMX19_02415 - Transcriptional regulatory protein WalR, at 2,535,073 to 2,535,447
_02415
MPMX19_02416: MPMX19_02416 - 3'3'-cGAMP-specific phosphodiesterase 2, at 2,535,513 to 2,537,189
_02416
Position (kb)
2535
2536 Strain fitness (log2 ratio)
-2
-1
0
1 at 2534.204 kb on + strand at 2534.204 kb on + strand at 2534.204 kb on + strand at 2534.204 kb on + strand at 2534.204 kb on + strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.205 kb on - strand at 2534.208 kb on + strand at 2534.208 kb on + strand at 2534.209 kb on - strand at 2534.209 kb on - strand at 2534.209 kb on - strand at 2534.209 kb on - strand at 2534.259 kb on - strand at 2534.259 kb on - strand at 2534.259 kb on - strand at 2534.312 kb on - strand at 2534.590 kb on + strand, within MPMX19_02414 at 2534.644 kb on + strand, within MPMX19_02414 at 2534.644 kb on + strand, within MPMX19_02414 at 2534.644 kb on + strand, within MPMX19_02414 at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.983 kb on + strand at 2534.984 kb on - strand at 2534.984 kb on - strand at 2534.984 kb on - strand at 2534.984 kb on - strand at 2534.984 kb on - strand at 2535.002 kb on + strand at 2535.002 kb on + strand at 2535.003 kb on - strand at 2535.003 kb on - strand at 2535.003 kb on - strand at 2535.036 kb on + strand at 2535.036 kb on + strand at 2535.036 kb on + strand at 2535.036 kb on + strand at 2535.037 kb on - strand at 2535.037 kb on - strand at 2535.037 kb on - strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.038 kb on + strand at 2535.039 kb on - strand at 2535.083 kb on + strand at 2535.083 kb on + strand at 2535.083 kb on + strand at 2535.083 kb on + strand at 2535.083 kb on + strand at 2535.084 kb on - strand at 2535.084 kb on - strand at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.196 kb on + strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.197 kb on - strand, within MPMX19_02415 at 2535.266 kb on - strand, within MPMX19_02415 at 2535.467 kb on + strand at 2535.468 kb on - strand at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.780 kb on + strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2535.781 kb on - strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.365 kb on + strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416 at 2536.366 kb on - strand, within MPMX19_02416
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,534,204 + -0.7 2,534,204 + -1.6 2,534,204 + +0.1 2,534,204 + +0.4 2,534,204 + -1.8 2,534,205 - -1.7 2,534,205 - -0.5 2,534,205 - +0.6 2,534,205 - -0.9 2,534,205 - -0.9 2,534,205 - -0.4 2,534,205 - +1.6 2,534,205 - +0.9 2,534,205 - -0.1 2,534,208 + -0.9 2,534,208 + +0.7 2,534,209 - -1.6 2,534,209 - -1.4 2,534,209 - -1.4 2,534,209 - -0.9 2,534,259 - +0.5 2,534,259 - -0.6 2,534,259 - -0.5 2,534,312 - +1.2 2,534,590 + MPMX19_02414 0.56 -1.5 2,534,644 + MPMX19_02414 0.65 -1.4 2,534,644 + MPMX19_02414 0.65 -0.9 2,534,644 + MPMX19_02414 0.65 -0.9 2,534,983 + -0.4 2,534,983 + -1.4 2,534,983 + -1.1 2,534,983 + +0.6 2,534,983 + +0.1 2,534,983 + -0.2 2,534,983 + -0.8 2,534,984 - +0.9 2,534,984 - -0.4 2,534,984 - +1.1 2,534,984 - -1.4 2,534,984 - -0.7 2,535,002 + +0.5 2,535,002 + -0.7 2,535,003 - -0.1 2,535,003 - -1.3 2,535,003 - +0.8 2,535,036 + +0.2 2,535,036 + -0.5 2,535,036 + -0.5 2,535,036 + -1.8 2,535,037 - -0.3 2,535,037 - +0.7 2,535,037 - +1.4 2,535,038 + +0.9 2,535,038 + +0.1 2,535,038 + +0.1 2,535,038 + +0.3 2,535,038 + +0.1 2,535,038 + -1.0 2,535,038 + -0.5 2,535,039 - -1.1 2,535,083 + -0.4 2,535,083 + +0.1 2,535,083 + -0.7 2,535,083 + -1.1 2,535,083 + -1.8 2,535,084 - +1.0 2,535,084 - -0.1 2,535,196 + MPMX19_02415 0.33 +0.3 2,535,196 + MPMX19_02415 0.33 -0.1 2,535,196 + MPMX19_02415 0.33 -0.1 2,535,196 + MPMX19_02415 0.33 -0.7 2,535,196 + MPMX19_02415 0.33 +0.0 2,535,196 + MPMX19_02415 0.33 -0.9 2,535,196 + MPMX19_02415 0.33 +1.2 2,535,196 + MPMX19_02415 0.33 +0.0 2,535,196 + MPMX19_02415 0.33 -1.8 2,535,196 + MPMX19_02415 0.33 +0.2 2,535,197 - MPMX19_02415 0.33 +0.4 2,535,197 - MPMX19_02415 0.33 -1.6 2,535,197 - MPMX19_02415 0.33 -0.9 2,535,197 - MPMX19_02415 0.33 -0.7 2,535,197 - MPMX19_02415 0.33 -1.7 2,535,197 - MPMX19_02415 0.33 -0.8 2,535,197 - MPMX19_02415 0.33 +0.6 2,535,197 - MPMX19_02415 0.33 +0.6 2,535,266 - MPMX19_02415 0.51 -1.1 2,535,467 + -0.1 2,535,468 - +0.1 2,535,780 + MPMX19_02416 0.16 -1.3 2,535,780 + MPMX19_02416 0.16 +0.5 2,535,780 + MPMX19_02416 0.16 +0.1 2,535,780 + MPMX19_02416 0.16 -1.0 2,535,780 + MPMX19_02416 0.16 -0.2 2,535,780 + MPMX19_02416 0.16 +0.1 2,535,780 + MPMX19_02416 0.16 -0.8 2,535,780 + MPMX19_02416 0.16 +0.3 2,535,780 + MPMX19_02416 0.16 +0.8 2,535,780 + MPMX19_02416 0.16 +1.0 2,535,780 + MPMX19_02416 0.16 -0.9 2,535,781 - MPMX19_02416 0.16 -0.3 2,535,781 - MPMX19_02416 0.16 +0.3 2,535,781 - MPMX19_02416 0.16 -0.6 2,535,781 - MPMX19_02416 0.16 -0.2 2,535,781 - MPMX19_02416 0.16 +0.9 2,535,781 - MPMX19_02416 0.16 -1.0 2,535,781 - MPMX19_02416 0.16 -1.3 2,535,781 - MPMX19_02416 0.16 -0.3 2,535,781 - MPMX19_02416 0.16 +0.3 2,535,781 - MPMX19_02416 0.16 -0.7 2,535,781 - MPMX19_02416 0.16 -0.2 2,536,365 + MPMX19_02416 0.51 -1.7 2,536,365 + MPMX19_02416 0.51 +0.1 2,536,365 + MPMX19_02416 0.51 -0.7 2,536,365 + MPMX19_02416 0.51 -2.5 2,536,365 + MPMX19_02416 0.51 -1.8 2,536,365 + MPMX19_02416 0.51 -0.9 2,536,365 + MPMX19_02416 0.51 -0.8 2,536,365 + MPMX19_02416 0.51 +1.7 2,536,365 + MPMX19_02416 0.51 -1.2 2,536,365 + MPMX19_02416 0.51 -1.0 2,536,365 + MPMX19_02416 0.51 -1.6 2,536,365 + MPMX19_02416 0.51 +0.3 2,536,365 + MPMX19_02416 0.51 -0.4 2,536,365 + MPMX19_02416 0.51 -1.7 2,536,365 + MPMX19_02416 0.51 -1.1 2,536,365 + MPMX19_02416 0.51 -0.9 2,536,365 + MPMX19_02416 0.51 +0.1 2,536,365 + MPMX19_02416 0.51 -1.4 2,536,365 + MPMX19_02416 0.51 -0.8 2,536,365 + MPMX19_02416 0.51 -0.4 2,536,365 + MPMX19_02416 0.51 +0.7 2,536,365 + MPMX19_02416 0.51 -0.4 2,536,365 + MPMX19_02416 0.51 -0.8 2,536,365 + MPMX19_02416 0.51 -0.5 2,536,365 + MPMX19_02416 0.51 +0.8 2,536,365 + MPMX19_02416 0.51 +0.1 2,536,365 + MPMX19_02416 0.51 -0.6 2,536,366 - MPMX19_02416 0.51 -1.1 2,536,366 - MPMX19_02416 0.51 -1.2 2,536,366 - MPMX19_02416 0.51 -1.1 2,536,366 - MPMX19_02416 0.51 -1.7 2,536,366 - MPMX19_02416 0.51 -0.9 2,536,366 - MPMX19_02416 0.51 -1.3 2,536,366 - MPMX19_02416 0.51 +0.7 2,536,366 - MPMX19_02416 0.51 -0.8 2,536,366 - MPMX19_02416 0.51 +0.9 2,536,366 - MPMX19_02416 0.51 -1.3 2,536,366 - MPMX19_02416 0.51 +0.3 2,536,366 - MPMX19_02416 0.51 -0.6 2,536,366 - MPMX19_02416 0.51 -0.1 2,536,366 - MPMX19_02416 0.51 -0.2 2,536,366 - MPMX19_02416 0.51 -1.4 2,536,366 - MPMX19_02416 0.51 -1.4 2,536,366 - MPMX19_02416 0.51 +0.1 2,536,366 - MPMX19_02416 0.51 -0.6 2,536,366 - MPMX19_02416 0.51 -0.6 2,536,366 - MPMX19_02416 0.51 +0.6 2,536,366 - MPMX19_02416 0.51 +0.0 2,536,366 - MPMX19_02416 0.51 -0.1 2,536,366 - MPMX19_02416 0.51 -1.6 2,536,366 - MPMX19_02416 0.51 -0.4 2,536,366 - MPMX19_02416 0.51 -0.0 2,536,366 - MPMX19_02416 0.51 -0.3 2,536,366 - MPMX19_02416 0.51 -0.1
Or see this region's nucleotide sequence