Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02372 and MPMX19_02373 are separated by 186 nucleotides MPMX19_02373 and MPMX19_02374 are separated by 115 nucleotides
MPMX19_02372: MPMX19_02372 - hypothetical protein, at 2,495,665 to 2,497,377
_02372
MPMX19_02373: MPMX19_02373 - DNA protection during starvation protein 2, at 2,497,564 to 2,498,031
_02373
MPMX19_02374: MPMX19_02374 - hypothetical protein, at 2,498,147 to 2,499,838
_02374
Position (kb)
2497
2498
2499 Strain fitness (log2 ratio)
-2
-1
0
1 at 2497.343 kb on + strand at 2497.343 kb on + strand at 2497.343 kb on + strand at 2497.343 kb on + strand at 2497.343 kb on + strand at 2497.344 kb on - strand at 2497.344 kb on - strand at 2497.344 kb on - strand at 2497.344 kb on - strand at 2497.344 kb on - strand at 2497.411 kb on - strand at 2497.521 kb on - strand at 2497.521 kb on - strand at 2497.531 kb on + strand at 2497.531 kb on + strand at 2497.531 kb on + strand at 2497.531 kb on + strand at 2497.531 kb on + strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.532 kb on - strand at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.651 kb on + strand, within MPMX19_02373 at 2497.652 kb on - strand, within MPMX19_02373 at 2497.652 kb on - strand, within MPMX19_02373 at 2497.652 kb on - strand, within MPMX19_02373 at 2497.652 kb on - strand, within MPMX19_02373 at 2497.652 kb on - strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.729 kb on + strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.730 kb on - strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.731 kb on + strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.732 kb on - strand, within MPMX19_02373 at 2497.770 kb on + strand, within MPMX19_02373 at 2497.770 kb on + strand, within MPMX19_02373 at 2497.771 kb on - strand, within MPMX19_02373 at 2498.012 kb on + strand at 2498.012 kb on + strand at 2498.012 kb on + strand at 2498.012 kb on + strand at 2498.012 kb on + strand at 2498.013 kb on - strand at 2498.013 kb on - strand at 2498.013 kb on - strand at 2498.013 kb on - strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.029 kb on + strand at 2498.030 kb on - strand at 2498.030 kb on - strand at 2498.030 kb on - strand at 2498.030 kb on - strand at 2498.030 kb on - strand at 2498.129 kb on - strand at 2498.133 kb on - strand at 2498.133 kb on - strand at 2498.133 kb on - strand at 2498.148 kb on + strand at 2498.148 kb on + strand at 2498.148 kb on + strand at 2498.149 kb on - strand at 2498.149 kb on - strand at 2498.149 kb on - strand at 2498.149 kb on - strand at 2498.272 kb on + strand at 2498.272 kb on + strand at 2498.273 kb on - strand at 2498.273 kb on - strand at 2498.273 kb on - strand at 2498.273 kb on - strand at 2498.273 kb on - strand at 2498.273 kb on - strand at 2498.874 kb on + strand, within MPMX19_02374 at 2498.874 kb on + strand, within MPMX19_02374 at 2498.874 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.982 kb on + strand, within MPMX19_02374 at 2498.983 kb on - strand, within MPMX19_02374 at 2498.983 kb on - strand, within MPMX19_02374 at 2498.983 kb on - strand, within MPMX19_02374
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,497,343 + -0.7 2,497,343 + +0.6 2,497,343 + -0.1 2,497,343 + -1.1 2,497,343 + -1.2 2,497,344 - -0.5 2,497,344 - -1.4 2,497,344 - -0.4 2,497,344 - +0.1 2,497,344 - +0.9 2,497,411 - -1.0 2,497,521 - -1.1 2,497,521 - -0.7 2,497,531 + -0.2 2,497,531 + -0.8 2,497,531 + -0.1 2,497,531 + -1.7 2,497,531 + +0.0 2,497,532 - -0.6 2,497,532 - +0.4 2,497,532 - -0.2 2,497,532 - +0.6 2,497,532 - +0.5 2,497,532 - +0.0 2,497,532 - -1.9 2,497,532 - -0.9 2,497,651 + MPMX19_02373 0.19 +1.3 2,497,651 + MPMX19_02373 0.19 -2.5 2,497,651 + MPMX19_02373 0.19 -1.1 2,497,651 + MPMX19_02373 0.19 -0.0 2,497,651 + MPMX19_02373 0.19 -2.2 2,497,651 + MPMX19_02373 0.19 +1.0 2,497,651 + MPMX19_02373 0.19 +0.3 2,497,651 + MPMX19_02373 0.19 -0.3 2,497,651 + MPMX19_02373 0.19 +0.1 2,497,651 + MPMX19_02373 0.19 +1.4 2,497,651 + MPMX19_02373 0.19 -0.7 2,497,652 - MPMX19_02373 0.19 +1.6 2,497,652 - MPMX19_02373 0.19 -0.5 2,497,652 - MPMX19_02373 0.19 +0.0 2,497,652 - MPMX19_02373 0.19 -2.0 2,497,652 - MPMX19_02373 0.19 -0.3 2,497,729 + MPMX19_02373 0.35 -0.3 2,497,729 + MPMX19_02373 0.35 +0.0 2,497,729 + MPMX19_02373 0.35 -1.4 2,497,729 + MPMX19_02373 0.35 -0.7 2,497,729 + MPMX19_02373 0.35 -0.4 2,497,729 + MPMX19_02373 0.35 +1.4 2,497,729 + MPMX19_02373 0.35 -1.1 2,497,730 - MPMX19_02373 0.35 -0.9 2,497,730 - MPMX19_02373 0.35 -0.3 2,497,730 - MPMX19_02373 0.35 -0.9 2,497,730 - MPMX19_02373 0.35 +0.9 2,497,730 - MPMX19_02373 0.35 -0.4 2,497,730 - MPMX19_02373 0.35 -0.5 2,497,730 - MPMX19_02373 0.35 -0.1 2,497,730 - MPMX19_02373 0.35 -0.6 2,497,731 + MPMX19_02373 0.36 -1.6 2,497,731 + MPMX19_02373 0.36 +0.6 2,497,731 + MPMX19_02373 0.36 -0.1 2,497,731 + MPMX19_02373 0.36 -0.8 2,497,731 + MPMX19_02373 0.36 +0.7 2,497,731 + MPMX19_02373 0.36 -1.3 2,497,731 + MPMX19_02373 0.36 -1.8 2,497,731 + MPMX19_02373 0.36 -0.4 2,497,731 + MPMX19_02373 0.36 -1.2 2,497,731 + MPMX19_02373 0.36 +0.9 2,497,731 + MPMX19_02373 0.36 -0.2 2,497,731 + MPMX19_02373 0.36 -0.2 2,497,732 - MPMX19_02373 0.36 -0.7 2,497,732 - MPMX19_02373 0.36 +1.3 2,497,732 - MPMX19_02373 0.36 -0.3 2,497,732 - MPMX19_02373 0.36 -0.8 2,497,732 - MPMX19_02373 0.36 -0.0 2,497,732 - MPMX19_02373 0.36 -1.3 2,497,732 - MPMX19_02373 0.36 +1.2 2,497,732 - MPMX19_02373 0.36 +0.3 2,497,732 - MPMX19_02373 0.36 +1.1 2,497,732 - MPMX19_02373 0.36 +0.3 2,497,732 - MPMX19_02373 0.36 +0.6 2,497,732 - MPMX19_02373 0.36 -0.1 2,497,732 - MPMX19_02373 0.36 -0.1 2,497,732 - MPMX19_02373 0.36 -0.8 2,497,732 - MPMX19_02373 0.36 +0.8 2,497,732 - MPMX19_02373 0.36 +0.4 2,497,732 - MPMX19_02373 0.36 -2.5 2,497,732 - MPMX19_02373 0.36 +0.7 2,497,770 + MPMX19_02373 0.44 -1.9 2,497,770 + MPMX19_02373 0.44 -0.2 2,497,771 - MPMX19_02373 0.44 +0.2 2,498,012 + -0.1 2,498,012 + -0.3 2,498,012 + -1.0 2,498,012 + +0.1 2,498,012 + -1.6 2,498,013 - -0.8 2,498,013 - +0.1 2,498,013 - +0.5 2,498,013 - -0.6 2,498,029 + -0.8 2,498,029 + -0.2 2,498,029 + +0.8 2,498,029 + -2.2 2,498,029 + -0.7 2,498,029 + -0.3 2,498,029 + +0.1 2,498,029 + -0.7 2,498,029 + -0.1 2,498,029 + +0.7 2,498,029 + +0.5 2,498,029 + +0.4 2,498,030 - -1.6 2,498,030 - +0.7 2,498,030 - +0.2 2,498,030 - +0.4 2,498,030 - -0.4 2,498,129 - -0.1 2,498,133 - -0.3 2,498,133 - -1.1 2,498,133 - -2.6 2,498,148 + -0.4 2,498,148 + -0.1 2,498,148 + -0.3 2,498,149 - -1.9 2,498,149 - +0.1 2,498,149 - -0.1 2,498,149 - -1.0 2,498,272 + +0.7 2,498,272 + -0.2 2,498,273 - -0.6 2,498,273 - -0.1 2,498,273 - -0.4 2,498,273 - -0.1 2,498,273 - +0.9 2,498,273 - -0.8 2,498,874 + MPMX19_02374 0.43 +0.3 2,498,874 + MPMX19_02374 0.43 +0.2 2,498,874 + MPMX19_02374 0.43 -1.3 2,498,982 + MPMX19_02374 0.49 -2.1 2,498,982 + MPMX19_02374 0.49 -0.7 2,498,982 + MPMX19_02374 0.49 -0.5 2,498,982 + MPMX19_02374 0.49 -0.5 2,498,982 + MPMX19_02374 0.49 -0.4 2,498,982 + MPMX19_02374 0.49 -0.6 2,498,982 + MPMX19_02374 0.49 -1.4 2,498,982 + MPMX19_02374 0.49 -0.9 2,498,982 + MPMX19_02374 0.49 -0.4 2,498,983 - MPMX19_02374 0.49 +1.0 2,498,983 - MPMX19_02374 0.49 +1.1 2,498,983 - MPMX19_02374 0.49 +1.1
Or see this region's nucleotide sequence