Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02161 and MPMX19_02162 are separated by 83 nucleotides MPMX19_02162 and MPMX19_02163 are separated by 4 nucleotides MPMX19_02163 and MPMX19_02164 are separated by 4 nucleotides
MPMX19_02161: MPMX19_02161 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,260,753 to 2,261,538
_02161
MPMX19_02162: MPMX19_02162 - Bifunctional chorismate mutase/prephenate dehydratase, at 2,261,622 to 2,262,488
_02162
MPMX19_02163: MPMX19_02163 - hypothetical protein, at 2,262,493 to 2,262,612
_02163
MPMX19_02164: MPMX19_02164 - NADH pyrophosphatase, at 2,262,617 to 2,263,552
_02164
Position (kb)
2261
2262
2263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.579 kb on + strand at 2261.580 kb on - strand at 2261.580 kb on - strand at 2261.580 kb on - strand at 2261.580 kb on - strand at 2261.580 kb on - strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.581 kb on + strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.582 kb on - strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.592 kb on + strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.593 kb on - strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.596 kb on + strand at 2261.597 kb on - strand at 2261.667 kb on + strand at 2261.667 kb on + strand at 2261.668 kb on - strand at 2261.668 kb on - strand at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.823 kb on + strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2261.824 kb on - strand, within MPMX19_02162 at 2262.090 kb on + strand, within MPMX19_02162 at 2262.090 kb on + strand, within MPMX19_02162 at 2262.090 kb on + strand, within MPMX19_02162 at 2262.090 kb on + strand, within MPMX19_02162 at 2262.090 kb on + strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.091 kb on - strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.246 kb on + strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.247 kb on - strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.303 kb on + strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.304 kb on - strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.339 kb on + strand, within MPMX19_02162 at 2262.340 kb on - strand, within MPMX19_02162 at 2262.340 kb on - strand, within MPMX19_02162 at 2262.340 kb on - strand, within MPMX19_02162 at 2262.340 kb on - strand, within MPMX19_02162 at 2262.340 kb on - strand, within MPMX19_02162 at 2262.436 kb on - strand at 2262.837 kb on + strand, within MPMX19_02164 at 2262.837 kb on + strand, within MPMX19_02164 at 2262.838 kb on - strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.158 kb on + strand, within MPMX19_02164 at 2263.159 kb on - strand, within MPMX19_02164 at 2263.159 kb on - strand, within MPMX19_02164 at 2263.159 kb on - strand, within MPMX19_02164 at 2263.159 kb on - strand, within MPMX19_02164 at 2263.159 kb on - strand, within MPMX19_02164
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,261,579 + -0.7 2,261,579 + -1.4 2,261,579 + -1.5 2,261,579 + -1.0 2,261,579 + -0.4 2,261,579 + +0.0 2,261,579 + +0.1 2,261,580 - +0.8 2,261,580 - -1.2 2,261,580 - +0.4 2,261,580 - -1.1 2,261,580 - +0.7 2,261,581 + -1.0 2,261,581 + +0.6 2,261,581 + +0.6 2,261,581 + -1.4 2,261,581 + -0.3 2,261,581 + +0.2 2,261,581 + -1.4 2,261,581 + -0.2 2,261,581 + -0.3 2,261,581 + -1.6 2,261,581 + -0.0 2,261,581 + -1.5 2,261,582 - -1.2 2,261,582 - -0.7 2,261,582 - -0.1 2,261,582 - -0.8 2,261,582 - +1.8 2,261,582 - +0.8 2,261,582 - +0.5 2,261,582 - +0.4 2,261,582 - -1.2 2,261,582 - -0.5 2,261,582 - +0.6 2,261,582 - -0.2 2,261,592 + -0.5 2,261,592 + -0.4 2,261,592 + +0.8 2,261,592 + -0.6 2,261,592 + -0.0 2,261,592 + -0.1 2,261,592 + -2.6 2,261,592 + -0.8 2,261,592 + +0.2 2,261,592 + -1.2 2,261,592 + +0.3 2,261,593 - +0.6 2,261,593 - -2.0 2,261,593 - -0.8 2,261,593 - +0.2 2,261,593 - +0.1 2,261,593 - -2.4 2,261,593 - +0.9 2,261,593 - -1.8 2,261,593 - -0.2 2,261,593 - -1.5 2,261,593 - -0.6 2,261,593 - -0.2 2,261,593 - -1.2 2,261,593 - -2.0 2,261,593 - -1.1 2,261,596 + +0.5 2,261,596 + +0.0 2,261,596 + -0.6 2,261,596 + +0.0 2,261,596 + -0.7 2,261,596 + +0.9 2,261,596 + -2.4 2,261,596 + -0.7 2,261,596 + +0.2 2,261,596 + -0.7 2,261,597 - -1.7 2,261,667 + -2.1 2,261,667 + -1.4 2,261,668 - -0.8 2,261,668 - +0.1 2,261,823 + MPMX19_02162 0.23 -1.4 2,261,823 + MPMX19_02162 0.23 -1.2 2,261,823 + MPMX19_02162 0.23 -0.4 2,261,823 + MPMX19_02162 0.23 -0.1 2,261,823 + MPMX19_02162 0.23 -1.3 2,261,823 + MPMX19_02162 0.23 -0.6 2,261,823 + MPMX19_02162 0.23 -0.8 2,261,823 + MPMX19_02162 0.23 +1.5 2,261,823 + MPMX19_02162 0.23 -0.2 2,261,823 + MPMX19_02162 0.23 -0.8 2,261,823 + MPMX19_02162 0.23 +0.8 2,261,823 + MPMX19_02162 0.23 -0.8 2,261,823 + MPMX19_02162 0.23 -0.7 2,261,824 - MPMX19_02162 0.23 -1.9 2,261,824 - MPMX19_02162 0.23 -1.6 2,261,824 - MPMX19_02162 0.23 -1.0 2,261,824 - MPMX19_02162 0.23 -1.5 2,261,824 - MPMX19_02162 0.23 -1.8 2,261,824 - MPMX19_02162 0.23 -0.4 2,261,824 - MPMX19_02162 0.23 -0.5 2,261,824 - MPMX19_02162 0.23 +0.6 2,261,824 - MPMX19_02162 0.23 -1.5 2,261,824 - MPMX19_02162 0.23 -0.1 2,262,090 + MPMX19_02162 0.54 -0.8 2,262,090 + MPMX19_02162 0.54 -0.4 2,262,090 + MPMX19_02162 0.54 -1.3 2,262,090 + MPMX19_02162 0.54 -1.6 2,262,090 + MPMX19_02162 0.54 -0.9 2,262,091 - MPMX19_02162 0.54 -1.4 2,262,091 - MPMX19_02162 0.54 -0.9 2,262,091 - MPMX19_02162 0.54 -1.4 2,262,091 - MPMX19_02162 0.54 -0.5 2,262,091 - MPMX19_02162 0.54 -0.8 2,262,091 - MPMX19_02162 0.54 -0.9 2,262,091 - MPMX19_02162 0.54 -0.0 2,262,091 - MPMX19_02162 0.54 -0.2 2,262,091 - MPMX19_02162 0.54 -0.8 2,262,091 - MPMX19_02162 0.54 -0.8 2,262,091 - MPMX19_02162 0.54 +0.2 2,262,246 + MPMX19_02162 0.72 +0.1 2,262,246 + MPMX19_02162 0.72 -2.1 2,262,246 + MPMX19_02162 0.72 -0.8 2,262,246 + MPMX19_02162 0.72 +0.4 2,262,246 + MPMX19_02162 0.72 +0.5 2,262,246 + MPMX19_02162 0.72 -1.0 2,262,246 + MPMX19_02162 0.72 -0.8 2,262,246 + MPMX19_02162 0.72 -1.0 2,262,246 + MPMX19_02162 0.72 -0.5 2,262,246 + MPMX19_02162 0.72 -0.8 2,262,247 - MPMX19_02162 0.72 -1.4 2,262,247 - MPMX19_02162 0.72 -0.8 2,262,247 - MPMX19_02162 0.72 -0.2 2,262,247 - MPMX19_02162 0.72 -1.0 2,262,247 - MPMX19_02162 0.72 +0.4 2,262,247 - MPMX19_02162 0.72 -0.8 2,262,247 - MPMX19_02162 0.72 +0.6 2,262,247 - MPMX19_02162 0.72 +0.4 2,262,247 - MPMX19_02162 0.72 +1.0 2,262,247 - MPMX19_02162 0.72 -0.7 2,262,303 + MPMX19_02162 0.79 -0.8 2,262,303 + MPMX19_02162 0.79 -0.2 2,262,303 + MPMX19_02162 0.79 +0.4 2,262,303 + MPMX19_02162 0.79 -1.8 2,262,303 + MPMX19_02162 0.79 -1.5 2,262,303 + MPMX19_02162 0.79 -1.0 2,262,303 + MPMX19_02162 0.79 +0.0 2,262,303 + MPMX19_02162 0.79 +0.5 2,262,303 + MPMX19_02162 0.79 +0.0 2,262,303 + MPMX19_02162 0.79 -1.5 2,262,303 + MPMX19_02162 0.79 -1.8 2,262,303 + MPMX19_02162 0.79 -2.2 2,262,303 + MPMX19_02162 0.79 +0.7 2,262,303 + MPMX19_02162 0.79 -0.3 2,262,303 + MPMX19_02162 0.79 +0.4 2,262,303 + MPMX19_02162 0.79 +0.6 2,262,303 + MPMX19_02162 0.79 -0.1 2,262,303 + MPMX19_02162 0.79 +0.1 2,262,303 + MPMX19_02162 0.79 +0.0 2,262,303 + MPMX19_02162 0.79 -0.7 2,262,303 + MPMX19_02162 0.79 -1.1 2,262,303 + MPMX19_02162 0.79 +1.0 2,262,303 + MPMX19_02162 0.79 +0.0 2,262,303 + MPMX19_02162 0.79 +0.7 2,262,303 + MPMX19_02162 0.79 -0.6 2,262,303 + MPMX19_02162 0.79 -0.8 2,262,303 + MPMX19_02162 0.79 -0.3 2,262,303 + MPMX19_02162 0.79 -1.4 2,262,304 - MPMX19_02162 0.79 -0.4 2,262,304 - MPMX19_02162 0.79 -0.9 2,262,304 - MPMX19_02162 0.79 -0.2 2,262,304 - MPMX19_02162 0.79 -0.4 2,262,304 - MPMX19_02162 0.79 -0.7 2,262,304 - MPMX19_02162 0.79 -2.1 2,262,304 - MPMX19_02162 0.79 +0.0 2,262,304 - MPMX19_02162 0.79 +0.3 2,262,304 - MPMX19_02162 0.79 -0.3 2,262,304 - MPMX19_02162 0.79 +1.1 2,262,304 - MPMX19_02162 0.79 -1.7 2,262,304 - MPMX19_02162 0.79 -2.7 2,262,304 - MPMX19_02162 0.79 +0.6 2,262,304 - MPMX19_02162 0.79 -1.2 2,262,304 - MPMX19_02162 0.79 +0.0 2,262,304 - MPMX19_02162 0.79 +0.2 2,262,304 - MPMX19_02162 0.79 +0.5 2,262,304 - MPMX19_02162 0.79 -0.6 2,262,304 - MPMX19_02162 0.79 -0.8 2,262,304 - MPMX19_02162 0.79 -0.0 2,262,304 - MPMX19_02162 0.79 +0.7 2,262,304 - MPMX19_02162 0.79 -1.2 2,262,304 - MPMX19_02162 0.79 +1.0 2,262,304 - MPMX19_02162 0.79 -1.6 2,262,304 - MPMX19_02162 0.79 +0.3 2,262,304 - MPMX19_02162 0.79 -0.9 2,262,304 - MPMX19_02162 0.79 -1.1 2,262,304 - MPMX19_02162 0.79 -0.5 2,262,304 - MPMX19_02162 0.79 -0.4 2,262,339 + MPMX19_02162 0.83 +0.1 2,262,339 + MPMX19_02162 0.83 +0.1 2,262,339 + MPMX19_02162 0.83 -0.2 2,262,339 + MPMX19_02162 0.83 -0.6 2,262,339 + MPMX19_02162 0.83 -0.1 2,262,339 + MPMX19_02162 0.83 -1.6 2,262,339 + MPMX19_02162 0.83 +1.2 2,262,339 + MPMX19_02162 0.83 -0.1 2,262,340 - MPMX19_02162 0.83 -1.1 2,262,340 - MPMX19_02162 0.83 +1.6 2,262,340 - MPMX19_02162 0.83 +0.5 2,262,340 - MPMX19_02162 0.83 -0.5 2,262,340 - MPMX19_02162 0.83 +0.6 2,262,436 - -0.6 2,262,837 + MPMX19_02164 0.24 -0.7 2,262,837 + MPMX19_02164 0.24 -1.2 2,262,838 - MPMX19_02164 0.24 +0.6 2,263,158 + MPMX19_02164 0.58 +0.0 2,263,158 + MPMX19_02164 0.58 -0.4 2,263,158 + MPMX19_02164 0.58 +1.2 2,263,158 + MPMX19_02164 0.58 +1.5 2,263,158 + MPMX19_02164 0.58 -0.4 2,263,158 + MPMX19_02164 0.58 +0.2 2,263,159 - MPMX19_02164 0.58 -0.8 2,263,159 - MPMX19_02164 0.58 +0.4 2,263,159 - MPMX19_02164 0.58 +0.4 2,263,159 - MPMX19_02164 0.58 -0.3 2,263,159 - MPMX19_02164 0.58 +0.2
Or see this region's nucleotide sequence