Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02123 and MPMX19_02124 are separated by 46 nucleotides MPMX19_02124 and MPMX19_02125 are separated by 157 nucleotides
MPMX19_02123: MPMX19_02123 - Glycerol-3-phosphate dehydrogenase [NAD(P)+], at 2,220,928 to 2,221,947
_02123
MPMX19_02124: MPMX19_02124 - tRNA N6-adenosine threonylcarbamoyltransferase, at 2,221,994 to 2,223,079
_02124
MPMX19_02125: MPMX19_02125 - Porphobilinogen deaminase, at 2,223,237 to 2,224,175
_02125
Position (kb)
2221
2222
2223
2224 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2221.078 kb on - strand, within MPMX19_02123 at 2221.079 kb on + strand, within MPMX19_02123 at 2221.079 kb on + strand, within MPMX19_02123 at 2221.079 kb on + strand, within MPMX19_02123 at 2221.079 kb on + strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.080 kb on - strand, within MPMX19_02123 at 2221.404 kb on - strand, within MPMX19_02123 at 2221.672 kb on - strand, within MPMX19_02123 at 2221.672 kb on - strand, within MPMX19_02123 at 2221.778 kb on + strand, within MPMX19_02123 at 2221.778 kb on + strand, within MPMX19_02123 at 2221.779 kb on - strand, within MPMX19_02123 at 2221.779 kb on - strand, within MPMX19_02123 at 2221.884 kb on + strand at 2221.885 kb on - strand at 2221.885 kb on - strand at 2221.965 kb on + strand at 2221.966 kb on - strand at 2221.966 kb on - strand at 2221.966 kb on - strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.980 kb on + strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2221.981 kb on - strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.178 kb on + strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.179 kb on - strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.182 kb on + strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.183 kb on - strand at 2223.224 kb on + strand at 2223.236 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,221,078 - MPMX19_02123 0.15 -1.5 2,221,079 + MPMX19_02123 0.15 -0.4 2,221,079 + MPMX19_02123 0.15 -1.3 2,221,079 + MPMX19_02123 0.15 -0.5 2,221,079 + MPMX19_02123 0.15 +0.2 2,221,080 - MPMX19_02123 0.15 -1.5 2,221,080 - MPMX19_02123 0.15 +0.2 2,221,080 - MPMX19_02123 0.15 -1.1 2,221,080 - MPMX19_02123 0.15 +0.2 2,221,080 - MPMX19_02123 0.15 -0.8 2,221,080 - MPMX19_02123 0.15 -1.8 2,221,080 - MPMX19_02123 0.15 -0.4 2,221,080 - MPMX19_02123 0.15 -1.4 2,221,080 - MPMX19_02123 0.15 -1.2 2,221,080 - MPMX19_02123 0.15 -1.0 2,221,404 - MPMX19_02123 0.47 +0.1 2,221,672 - MPMX19_02123 0.73 -1.5 2,221,672 - MPMX19_02123 0.73 -0.6 2,221,778 + MPMX19_02123 0.83 -0.1 2,221,778 + MPMX19_02123 0.83 +0.1 2,221,779 - MPMX19_02123 0.83 -0.9 2,221,779 - MPMX19_02123 0.83 -0.2 2,221,884 + +1.2 2,221,885 - +0.2 2,221,885 - +0.2 2,221,965 + +1.8 2,221,966 - -0.4 2,221,966 - -1.3 2,221,966 - -1.1 2,221,980 + -0.2 2,221,980 + +1.8 2,221,980 + -0.3 2,221,980 + +0.2 2,221,980 + -1.6 2,221,980 + -0.9 2,221,980 + -1.0 2,221,981 - +0.8 2,221,981 - -1.1 2,221,981 - +1.0 2,221,981 - -0.1 2,221,981 - -0.1 2,221,981 - +0.2 2,221,981 - -0.9 2,221,981 - +0.5 2,223,178 + -0.5 2,223,178 + +0.5 2,223,178 + -0.1 2,223,178 + +0.4 2,223,178 + +0.2 2,223,178 + +1.5 2,223,178 + -1.0 2,223,178 + +1.1 2,223,178 + +0.7 2,223,178 + -0.9 2,223,178 + -0.2 2,223,178 + -0.7 2,223,178 + -3.0 2,223,178 + -0.5 2,223,178 + -0.1 2,223,178 + +0.2 2,223,178 + +0.0 2,223,178 + +0.1 2,223,178 + +1.5 2,223,178 + -1.2 2,223,178 + +0.8 2,223,178 + +0.3 2,223,179 - -0.8 2,223,179 - +1.0 2,223,179 - +1.0 2,223,179 - -0.0 2,223,179 - +1.0 2,223,179 - -2.2 2,223,179 - +0.2 2,223,179 - -1.0 2,223,179 - -0.5 2,223,179 - -0.4 2,223,179 - -2.0 2,223,179 - -0.4 2,223,179 - -0.5 2,223,179 - +0.0 2,223,179 - -1.8 2,223,179 - +1.3 2,223,179 - +0.3 2,223,179 - -1.0 2,223,179 - +0.3 2,223,179 - -0.3 2,223,179 - +0.6 2,223,179 - +0.5 2,223,179 - -0.7 2,223,179 - +0.6 2,223,179 - -1.7 2,223,179 - +1.8 2,223,179 - +0.1 2,223,182 + +0.2 2,223,182 + -1.0 2,223,182 + +0.2 2,223,182 + +0.7 2,223,182 + +0.2 2,223,182 + +0.4 2,223,182 + +0.9 2,223,182 + -1.0 2,223,182 + +1.1 2,223,182 + +0.4 2,223,182 + -1.7 2,223,182 + -2.4 2,223,182 + +0.5 2,223,182 + -0.2 2,223,182 + -2.6 2,223,182 + -1.7 2,223,183 - -1.5 2,223,183 - +0.2 2,223,183 - -0.7 2,223,183 - -1.5 2,223,183 - -1.8 2,223,183 - -1.2 2,223,183 - -0.3 2,223,183 - -0.7 2,223,183 - -0.8 2,223,183 - -0.1 2,223,183 - -2.3 2,223,183 - -0.3 2,223,183 - -0.5 2,223,183 - +0.0 2,223,183 - -0.8 2,223,183 - -1.4 2,223,183 - -0.8 2,223,183 - -0.5 2,223,224 + +1.1 2,223,236 + +1.5
Or see this region's nucleotide sequence