Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02112 and MPMX19_02113 are separated by 68 nucleotides MPMX19_02113 and MPMX19_02114 are separated by 281 nucleotides MPMX19_02114 and MPMX19_02115 are separated by 157 nucleotides
MPMX19_02112: MPMX19_02112 - hypothetical protein, at 2,212,057 to 2,212,686
_02112
MPMX19_02113: MPMX19_02113 - Dihydrolipoyl dehydrogenase 3, at 2,212,755 to 2,214,152
_02113
MPMX19_02114: MPMX19_02114 - hypothetical protein, at 2,214,434 to 2,214,592
_02114
MPMX19_02115: MPMX19_02115 - hypothetical protein, at 2,214,750 to 2,215,163
_02115
Position (kb)
2212
2213
2214
2215 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2212.082 kb on + strand at 2212.082 kb on + strand at 2212.082 kb on + strand at 2212.083 kb on - strand at 2212.083 kb on - strand at 2212.083 kb on - strand at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.144 kb on + strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.145 kb on - strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.162 kb on + strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.163 kb on - strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.276 kb on + strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.277 kb on - strand, within MPMX19_02112 at 2212.567 kb on + strand, within MPMX19_02112 at 2212.567 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.618 kb on + strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.619 kb on - strand, within MPMX19_02112 at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.735 kb on + strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2212.736 kb on - strand at 2214.242 kb on - strand at 2214.242 kb on - strand at 2214.242 kb on - strand at 2214.242 kb on - strand at 2214.242 kb on - strand at 2214.242 kb on - strand at 2214.376 kb on - strand at 2214.376 kb on - strand at 2214.590 kb on + strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.591 kb on - strand at 2214.778 kb on + strand at 2214.778 kb on + strand at 2214.779 kb on - strand at 2214.779 kb on - strand at 2215.106 kb on + strand, within MPMX19_02115 at 2215.106 kb on + strand, within MPMX19_02115 at 2215.106 kb on + strand, within MPMX19_02115 at 2215.106 kb on + strand, within MPMX19_02115 at 2215.106 kb on + strand, within MPMX19_02115 at 2215.106 kb on + strand, within MPMX19_02115 at 2215.107 kb on - strand, within MPMX19_02115 at 2215.107 kb on - strand, within MPMX19_02115 at 2215.107 kb on - strand, within MPMX19_02115 at 2215.107 kb on - strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.118 kb on + strand, within MPMX19_02115 at 2215.119 kb on - strand, within MPMX19_02115 at 2215.119 kb on - strand, within MPMX19_02115 at 2215.119 kb on - strand, within MPMX19_02115 at 2215.119 kb on - strand, within MPMX19_02115
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,212,082 + -1.9 2,212,082 + -1.5 2,212,082 + -2.1 2,212,083 - -1.8 2,212,083 - +1.0 2,212,083 - -0.7 2,212,144 + MPMX19_02112 0.14 -0.2 2,212,144 + MPMX19_02112 0.14 +0.6 2,212,144 + MPMX19_02112 0.14 -0.9 2,212,144 + MPMX19_02112 0.14 -0.2 2,212,144 + MPMX19_02112 0.14 -0.5 2,212,144 + MPMX19_02112 0.14 -0.6 2,212,144 + MPMX19_02112 0.14 -0.3 2,212,144 + MPMX19_02112 0.14 -1.0 2,212,144 + MPMX19_02112 0.14 -1.1 2,212,144 + MPMX19_02112 0.14 -0.3 2,212,145 - MPMX19_02112 0.14 -0.3 2,212,145 - MPMX19_02112 0.14 +0.4 2,212,145 - MPMX19_02112 0.14 -0.5 2,212,145 - MPMX19_02112 0.14 +0.8 2,212,145 - MPMX19_02112 0.14 -0.3 2,212,145 - MPMX19_02112 0.14 -1.2 2,212,145 - MPMX19_02112 0.14 +1.0 2,212,145 - MPMX19_02112 0.14 -1.7 2,212,145 - MPMX19_02112 0.14 +0.5 2,212,145 - MPMX19_02112 0.14 -1.4 2,212,145 - MPMX19_02112 0.14 -0.4 2,212,145 - MPMX19_02112 0.14 -1.4 2,212,145 - MPMX19_02112 0.14 -0.4 2,212,162 + MPMX19_02112 0.17 -0.0 2,212,162 + MPMX19_02112 0.17 +0.8 2,212,162 + MPMX19_02112 0.17 -0.9 2,212,162 + MPMX19_02112 0.17 -0.2 2,212,162 + MPMX19_02112 0.17 -0.4 2,212,162 + MPMX19_02112 0.17 -0.6 2,212,162 + MPMX19_02112 0.17 -0.5 2,212,162 + MPMX19_02112 0.17 -0.7 2,212,162 + MPMX19_02112 0.17 -0.1 2,212,162 + MPMX19_02112 0.17 +1.4 2,212,162 + MPMX19_02112 0.17 +1.8 2,212,163 - MPMX19_02112 0.17 -0.6 2,212,163 - MPMX19_02112 0.17 -1.4 2,212,163 - MPMX19_02112 0.17 -1.4 2,212,163 - MPMX19_02112 0.17 +0.6 2,212,163 - MPMX19_02112 0.17 +0.2 2,212,163 - MPMX19_02112 0.17 -1.2 2,212,276 + MPMX19_02112 0.35 +0.6 2,212,276 + MPMX19_02112 0.35 -0.1 2,212,276 + MPMX19_02112 0.35 -0.9 2,212,276 + MPMX19_02112 0.35 -1.4 2,212,276 + MPMX19_02112 0.35 -0.4 2,212,276 + MPMX19_02112 0.35 -1.5 2,212,276 + MPMX19_02112 0.35 -0.2 2,212,276 + MPMX19_02112 0.35 -1.8 2,212,277 - MPMX19_02112 0.35 -0.0 2,212,277 - MPMX19_02112 0.35 -1.0 2,212,277 - MPMX19_02112 0.35 +0.1 2,212,277 - MPMX19_02112 0.35 +0.4 2,212,277 - MPMX19_02112 0.35 +0.0 2,212,277 - MPMX19_02112 0.35 -0.2 2,212,277 - MPMX19_02112 0.35 -0.5 2,212,567 + MPMX19_02112 0.81 -1.0 2,212,567 + MPMX19_02112 0.81 -1.7 2,212,618 + MPMX19_02112 0.89 -0.5 2,212,618 + MPMX19_02112 0.89 -0.2 2,212,618 + MPMX19_02112 0.89 -0.6 2,212,618 + MPMX19_02112 0.89 +1.3 2,212,618 + MPMX19_02112 0.89 -2.1 2,212,618 + MPMX19_02112 0.89 +0.3 2,212,618 + MPMX19_02112 0.89 -0.5 2,212,618 + MPMX19_02112 0.89 -0.6 2,212,618 + MPMX19_02112 0.89 -2.0 2,212,618 + MPMX19_02112 0.89 -0.6 2,212,618 + MPMX19_02112 0.89 -0.8 2,212,618 + MPMX19_02112 0.89 -0.4 2,212,618 + MPMX19_02112 0.89 -1.0 2,212,618 + MPMX19_02112 0.89 -0.8 2,212,618 + MPMX19_02112 0.89 -0.3 2,212,618 + MPMX19_02112 0.89 -2.1 2,212,618 + MPMX19_02112 0.89 -1.4 2,212,618 + MPMX19_02112 0.89 -0.5 2,212,618 + MPMX19_02112 0.89 -0.1 2,212,618 + MPMX19_02112 0.89 +0.2 2,212,618 + MPMX19_02112 0.89 -0.0 2,212,618 + MPMX19_02112 0.89 -0.7 2,212,618 + MPMX19_02112 0.89 -1.8 2,212,618 + MPMX19_02112 0.89 -0.6 2,212,618 + MPMX19_02112 0.89 +0.1 2,212,618 + MPMX19_02112 0.89 -0.5 2,212,618 + MPMX19_02112 0.89 +0.2 2,212,618 + MPMX19_02112 0.89 -0.7 2,212,618 + MPMX19_02112 0.89 +1.0 2,212,618 + MPMX19_02112 0.89 -0.1 2,212,618 + MPMX19_02112 0.89 -0.4 2,212,618 + MPMX19_02112 0.89 -0.8 2,212,618 + MPMX19_02112 0.89 -0.3 2,212,618 + MPMX19_02112 0.89 -0.9 2,212,618 + MPMX19_02112 0.89 -1.2 2,212,619 - MPMX19_02112 0.89 -1.2 2,212,619 - MPMX19_02112 0.89 -2.1 2,212,619 - MPMX19_02112 0.89 -1.5 2,212,619 - MPMX19_02112 0.89 +0.1 2,212,619 - MPMX19_02112 0.89 -0.8 2,212,619 - MPMX19_02112 0.89 -0.9 2,212,619 - MPMX19_02112 0.89 +0.5 2,212,619 - MPMX19_02112 0.89 -0.4 2,212,619 - MPMX19_02112 0.89 -1.5 2,212,619 - MPMX19_02112 0.89 +1.2 2,212,619 - MPMX19_02112 0.89 -0.7 2,212,619 - MPMX19_02112 0.89 -0.3 2,212,619 - MPMX19_02112 0.89 -0.3 2,212,619 - MPMX19_02112 0.89 -0.2 2,212,619 - MPMX19_02112 0.89 -0.4 2,212,619 - MPMX19_02112 0.89 +0.2 2,212,619 - MPMX19_02112 0.89 -1.1 2,212,619 - MPMX19_02112 0.89 -1.0 2,212,619 - MPMX19_02112 0.89 +0.5 2,212,619 - MPMX19_02112 0.89 -2.3 2,212,619 - MPMX19_02112 0.89 -0.9 2,212,619 - MPMX19_02112 0.89 +0.4 2,212,735 + +1.3 2,212,735 + +1.4 2,212,735 + +0.2 2,212,735 + +1.5 2,212,735 + +3.4 2,212,735 + +0.1 2,212,735 + +1.4 2,212,735 + -0.5 2,212,735 + +0.3 2,212,735 + -1.6 2,212,735 + -0.1 2,212,735 + +0.5 2,212,736 - -1.3 2,212,736 - -1.0 2,212,736 - +0.8 2,212,736 - -0.8 2,212,736 - -0.7 2,212,736 - -1.8 2,212,736 - -0.6 2,212,736 - +0.3 2,212,736 - -0.0 2,212,736 - -1.6 2,212,736 - +0.2 2,212,736 - +0.3 2,212,736 - +0.7 2,212,736 - -1.8 2,212,736 - +0.9 2,212,736 - -1.7 2,212,736 - +0.3 2,212,736 - +0.1 2,214,242 - -0.9 2,214,242 - -0.5 2,214,242 - -0.6 2,214,242 - +1.3 2,214,242 - -1.8 2,214,242 - +0.4 2,214,376 - +0.8 2,214,376 - +0.8 2,214,590 + +0.6 2,214,591 - -1.2 2,214,591 - +1.5 2,214,591 - -1.6 2,214,591 - -0.2 2,214,591 - -0.0 2,214,591 - +1.4 2,214,591 - -1.0 2,214,591 - -0.3 2,214,778 + -0.5 2,214,778 + +0.7 2,214,779 - +0.6 2,214,779 - -0.2 2,215,106 + MPMX19_02115 0.86 +1.2 2,215,106 + MPMX19_02115 0.86 -1.4 2,215,106 + MPMX19_02115 0.86 +0.3 2,215,106 + MPMX19_02115 0.86 -1.7 2,215,106 + MPMX19_02115 0.86 -1.8 2,215,106 + MPMX19_02115 0.86 -0.7 2,215,107 - MPMX19_02115 0.86 -0.3 2,215,107 - MPMX19_02115 0.86 -1.6 2,215,107 - MPMX19_02115 0.86 -1.0 2,215,107 - MPMX19_02115 0.86 -0.1 2,215,118 + MPMX19_02115 0.89 -1.2 2,215,118 + MPMX19_02115 0.89 +1.1 2,215,118 + MPMX19_02115 0.89 +0.7 2,215,118 + MPMX19_02115 0.89 -0.2 2,215,118 + MPMX19_02115 0.89 +1.1 2,215,118 + MPMX19_02115 0.89 +0.8 2,215,119 - MPMX19_02115 0.89 +0.0 2,215,119 - MPMX19_02115 0.89 -0.5 2,215,119 - MPMX19_02115 0.89 +1.2 2,215,119 - MPMX19_02115 0.89 +0.0
Or see this region's nucleotide sequence