Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01899 and MPMX19_01900 are separated by 160 nucleotides MPMX19_01900 and MPMX19_01901 are separated by 97 nucleotides
MPMX19_01899: MPMX19_01899 - hypothetical protein, at 1,982,791 to 1,984,800
_01899
MPMX19_01900: MPMX19_01900 - hypothetical protein, at 1,984,961 to 1,985,626
_01900
MPMX19_01901: MPMX19_01901 - hypothetical protein, at 1,985,724 to 1,987,421
_01901
Position (kb)
1984
1985
1986 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1984.257 kb on + strand, within MPMX19_01899 at 1984.557 kb on + strand, within MPMX19_01899 at 1984.557 kb on + strand, within MPMX19_01899 at 1984.557 kb on + strand, within MPMX19_01899 at 1984.557 kb on + strand, within MPMX19_01899 at 1984.557 kb on + strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.558 kb on - strand, within MPMX19_01899 at 1984.798 kb on + strand at 1984.798 kb on + strand at 1984.836 kb on + strand at 1984.836 kb on + strand at 1984.836 kb on + strand at 1984.836 kb on + strand at 1984.836 kb on + strand at 1984.837 kb on - strand at 1984.837 kb on - strand at 1984.837 kb on - strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.916 kb on + strand at 1984.917 kb on - strand at 1984.917 kb on - strand at 1984.917 kb on - strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.953 kb on + strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1984.954 kb on - strand at 1985.307 kb on - strand, within MPMX19_01900 at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.700 kb on + strand at 1985.701 kb on - strand at 1985.701 kb on - strand at 1985.701 kb on - strand at 1985.701 kb on - strand at 1985.701 kb on - strand at 1985.711 kb on + strand at 1985.711 kb on + strand at 1985.712 kb on - strand at 1985.712 kb on - strand at 1985.712 kb on - strand at 1985.712 kb on - strand at 1985.712 kb on - strand at 1985.712 kb on - strand at 1985.712 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,984,257 + MPMX19_01899 0.73 +0.2 1,984,557 + MPMX19_01899 0.88 -0.2 1,984,557 + MPMX19_01899 0.88 -1.8 1,984,557 + MPMX19_01899 0.88 -1.7 1,984,557 + MPMX19_01899 0.88 +0.0 1,984,557 + MPMX19_01899 0.88 -1.3 1,984,558 - MPMX19_01899 0.88 -0.6 1,984,558 - MPMX19_01899 0.88 -1.8 1,984,558 - MPMX19_01899 0.88 -1.2 1,984,558 - MPMX19_01899 0.88 -1.7 1,984,558 - MPMX19_01899 0.88 -0.4 1,984,558 - MPMX19_01899 0.88 +1.7 1,984,558 - MPMX19_01899 0.88 -0.4 1,984,558 - MPMX19_01899 0.88 -1.3 1,984,558 - MPMX19_01899 0.88 -0.1 1,984,558 - MPMX19_01899 0.88 +0.2 1,984,558 - MPMX19_01899 0.88 -1.7 1,984,558 - MPMX19_01899 0.88 +0.5 1,984,558 - MPMX19_01899 0.88 -0.4 1,984,558 - MPMX19_01899 0.88 +0.7 1,984,798 + +0.7 1,984,798 + -0.9 1,984,836 + +0.2 1,984,836 + -0.4 1,984,836 + +0.6 1,984,836 + +0.5 1,984,836 + -2.4 1,984,837 - +0.2 1,984,837 - +1.9 1,984,837 - -1.1 1,984,916 + -1.2 1,984,916 + -1.7 1,984,916 + -0.7 1,984,916 + -0.3 1,984,916 + -0.1 1,984,916 + -2.8 1,984,916 + +0.1 1,984,916 + +0.4 1,984,917 - -1.8 1,984,917 - -1.6 1,984,917 - +0.7 1,984,953 + -1.3 1,984,953 + +0.0 1,984,953 + +0.2 1,984,953 + -0.4 1,984,953 + -0.1 1,984,953 + -0.6 1,984,953 + -0.1 1,984,953 + +1.0 1,984,953 + -0.2 1,984,953 + +0.2 1,984,953 + -1.3 1,984,953 + -2.0 1,984,953 + -0.2 1,984,953 + -0.8 1,984,953 + +1.0 1,984,953 + -0.8 1,984,953 + +1.2 1,984,953 + +0.3 1,984,954 - -1.6 1,984,954 - +0.3 1,984,954 - -1.1 1,984,954 - +2.0 1,984,954 - -2.7 1,984,954 - +0.0 1,984,954 - -0.8 1,984,954 - -2.8 1,984,954 - -2.2 1,984,954 - -1.6 1,984,954 - -1.6 1,984,954 - -0.4 1,984,954 - -2.1 1,984,954 - -2.3 1,984,954 - -2.0 1,984,954 - -0.3 1,984,954 - +0.2 1,985,307 - MPMX19_01900 0.52 -0.6 1,985,700 + -0.7 1,985,700 + -1.0 1,985,700 + +0.7 1,985,700 + -1.2 1,985,700 + -0.1 1,985,700 + -0.8 1,985,700 + +0.4 1,985,701 - +0.3 1,985,701 - -0.4 1,985,701 - -1.3 1,985,701 - +0.3 1,985,701 - -0.7 1,985,711 + -1.3 1,985,711 + -0.3 1,985,712 - -0.7 1,985,712 - -2.2 1,985,712 - -0.8 1,985,712 - +0.7 1,985,712 - -0.7 1,985,712 - -1.8 1,985,712 - -1.6
Or see this region's nucleotide sequence