Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01565

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
				remove
1,642,441	+	MPMX19_01563	0.73	-0.3
1,642,441	+	MPMX19_01563	0.73	-1.3
1,642,441	+	MPMX19_01563	0.73	-1.4
1,642,441	+	MPMX19_01563	0.73	-0.1
1,642,441	+	MPMX19_01563	0.73	+0.6
1,642,441	+	MPMX19_01563	0.73	-1.1
1,642,441	+	MPMX19_01563	0.73	-0.7
1,642,441	+	MPMX19_01563	0.73	-1.1
1,642,441	+	MPMX19_01563	0.73	-0.6
1,642,441	+	MPMX19_01563	0.73	-1.1
1,642,442	-	MPMX19_01563	0.73	-0.6
1,642,442	-	MPMX19_01563	0.73	-1.4
1,642,442	-	MPMX19_01563	0.73	-0.9
1,642,442	-	MPMX19_01563	0.73	-0.5
1,642,442	-	MPMX19_01563	0.73	-0.7
1,642,442	-	MPMX19_01563	0.73	+2.3
1,642,442	-	MPMX19_01563	0.73	+0.7
1,642,442	-	MPMX19_01563	0.73	-0.0
1,642,442	-	MPMX19_01563	0.73	+1.4
1,642,442	-	MPMX19_01563	0.73	+0.5
1,642,442	-	MPMX19_01563	0.73	-1.7
1,642,442	-	MPMX19_01563	0.73	-2.1
1,642,661	+			+0.7
1,642,661	+			-0.6
1,642,662	-			-0.6
1,642,662	-			-0.4
1,642,781	+			-0.1
1,642,781	+			-0.0
1,642,781	+			+0.1
1,642,782	-			-2.3
1,642,795	-			-1.5
1,642,812	-			-0.4
1,642,869	-			-0.4
1,642,877	+			-2.0
1,642,877	+			-0.4
1,642,877	+			-0.6
1,642,877	+			-0.4
1,642,878	-			+0.0
1,642,880	+			+0.6
1,642,880	+			+0.6
1,643,119	+	MPMX19_01564	0.62	+0.5
1,643,120	-	MPMX19_01564	0.62	+0.7
1,643,120	-	MPMX19_01564	0.62	-1.1
1,643,120	-	MPMX19_01564	0.62	-0.4
1,643,158	+	MPMX19_01564	0.75	-1.3
1,643,158	+	MPMX19_01564	0.75	+0.1
1,643,158	+	MPMX19_01564	0.75	+0.2
1,643,158	+	MPMX19_01564	0.75	+0.5
1,643,159	-	MPMX19_01564	0.75	-0.9
1,643,159	-	MPMX19_01564	0.75	+0.3
1,643,159	-	MPMX19_01564	0.75	+0.7
1,643,159	-	MPMX19_01564	0.75	-1.2
1,643,159	-	MPMX19_01564	0.75	+0.7
1,643,159	-	MPMX19_01564	0.75	+2.3
1,643,159	-	MPMX19_01564	0.75	-1.6
1,643,167	+	MPMX19_01564	0.78	-0.9
1,643,167	+	MPMX19_01564	0.78	-1.0
1,643,167	+	MPMX19_01564	0.78	+0.3
1,643,167	+	MPMX19_01564	0.78	+0.2
1,643,167	+	MPMX19_01564	0.78	-0.1
1,643,167	+	MPMX19_01564	0.78	+1.0
1,643,168	-	MPMX19_01564	0.78	-1.1
1,643,168	-	MPMX19_01564	0.78	+0.2
1,643,168	-	MPMX19_01564	0.78	-0.4
1,643,168	-	MPMX19_01564	0.78	-0.1
1,643,168	-	MPMX19_01564	0.78	-0.8
1,643,168	-	MPMX19_01564	0.78	-0.9
1,643,168	-	MPMX19_01564	0.78	-0.7
1,643,168	-	MPMX19_01564	0.78	-0.7
1,643,168	-	MPMX19_01564	0.78	-0.6
1,643,168	-	MPMX19_01564	0.78	-0.3
1,643,168	-	MPMX19_01564	0.78	-1.1
1,643,168	-	MPMX19_01564	0.78	-2.0
1,643,168	-	MPMX19_01564	0.78	-2.3
1,643,235	+			-0.9
1,643,235	+			-1.0
1,643,235	+			-1.0
1,643,235	+			+0.2
1,643,235	+			-0.6
1,643,235	+			-0.6
1,643,235	+			-0.1
1,643,235	+			-1.7
1,643,235	+			+2.3
1,643,235	+			-0.5
1,643,235	+			-1.2
1,643,236	-			-0.8
1,643,236	-			-0.4
1,643,236	-			-0.6
1,643,236	-			-1.1
1,643,236	-			-0.1
1,643,236	-			-1.4
1,643,236	-			-0.1
1,643,236	-			-1.1
1,643,236	-			-0.7
1,643,236	-			+0.1
1,643,236	-			-0.2
1,643,236	-			+0.4
1,643,236	-			+1.3
1,643,236	-			-1.8
1,643,236	-			-1.3
1,643,236	-			+1.0
1,643,236	-			-0.2
1,643,236	-			+2.5
1,643,236	-			-0.5
1,643,236	-			+0.7
1,643,236	-			-0.8
1,643,236	-			-0.9
1,643,236	-			+0.7
1,643,236	-			+0.1
1,643,236	-			-1.1
1,643,266	+			+1.5
1,643,266	+			-1.0
1,643,266	+			-1.1
1,643,266	+			-1.3
1,643,266	+			-0.7
1,643,266	+			-0.3
1,643,266	+			-2.3
1,643,266	+			-1.7
1,643,266	+			-1.8
1,643,266	+			-0.3
1,643,266	+			-1.0
1,643,266	+			-0.2
1,643,266	+			-1.3
1,643,266	+			-0.5
1,643,266	+			+1.1
1,643,266	+			-0.5
1,643,266	+			+0.1
1,643,266	+			+0.3
1,643,266	+			-1.1
1,643,266	+			-0.7
1,643,266	+			+0.4
1,643,266	+			-1.2
1,643,266	+			-0.1
1,643,266	+			+1.1
1,643,266	+			-0.4
1,643,266	+			-0.6
1,643,266	+			+1.3
1,643,266	+			-0.2
1,643,267	-			-0.6
1,643,267	-			-0.1
1,643,267	-			-0.3
1,643,267	-			-0.6
1,643,267	-			-2.0
1,643,267	-			-1.3
1,643,267	-			-0.6
1,643,267	-			+1.7
1,643,267	-			+0.7
1,643,267	-			-0.4
1,643,267	-			+0.9
1,643,267	-			+1.1
1,643,267	-			+0.7
1,643,267	-			-2.4
1,643,267	-			-0.3
1,643,267	-			-0.1
1,643,267	-			-0.3
1,643,267	-			-0.3
1,643,267	-			-0.9
1,643,267	-			-1.7
1,643,267	-			-0.4
1,643,267	-			-1.3
1,643,267	-			+0.5
1,643,267	-			-1.1
1,643,313	+			+0.5
1,643,314	-			+1.1
1,643,343	+			+0.2
1,643,343	+			+0.4
1,643,343	+			-0.4
1,643,343	+			+0.3
1,643,344	-			+0.7
1,643,344	-			+0.1
1,643,376	+			-0.5
1,643,432	+			+0.6
1,643,432	+			-0.2
1,643,432	+			-0.3
1,643,432	+			+1.0
1,643,433	-			-0.4
1,643,433	-			-0.5
1,643,433	-			-1.1
1,643,476	-	MPMX19_01565	0.29	-1.1
1,643,544	+	MPMX19_01565	0.64	+0.5
1,643,544	+	MPMX19_01565	0.64	-0.3
1,643,544	+	MPMX19_01565	0.64	-0.4
1,643,544	+	MPMX19_01565	0.64	-1.4
1,643,545	-	MPMX19_01565	0.65	-0.6
1,643,610	+			+1.4
1,643,626	-			+0.4
1,643,710	+	MPMX19_01566	0.11	-0.4
1,643,710	+	MPMX19_01566	0.11	+1.0
1,643,710	+	MPMX19_01566	0.11	-1.3
1,643,711	-	MPMX19_01566	0.12	-0.1
1,643,711	-	MPMX19_01566	0.12	+1.7
1,643,711	-	MPMX19_01566	0.12	-1.2
1,643,711	-	MPMX19_01566	0.12	-1.1
1,643,861	+	MPMX19_01566	0.87	+0.1
1,643,861	+	MPMX19_01566	0.87	+1.0
1,643,861	+	MPMX19_01566	0.87	+0.1
1,643,861	+	MPMX19_01566	0.87	-0.3
1,643,861	+	MPMX19_01566	0.87	-0.1
1,643,861	+	MPMX19_01566	0.87	-0.7
1,643,861	+	MPMX19_01566	0.87	-0.5
1,643,861	+	MPMX19_01566	0.87	+0.5
1,643,861	+	MPMX19_01566	0.87	-0.7
1,643,861	+	MPMX19_01566	0.87	+2.1
1,643,861	+	MPMX19_01566	0.87	+0.1
1,643,861	+	MPMX19_01566	0.87	+1.1
1,643,861	+	MPMX19_01566	0.87	-0.6
1,643,861	+	MPMX19_01566	0.87	-0.1
1,643,861	+	MPMX19_01566	0.87	-0.3
1,643,861	+	MPMX19_01566	0.87	-1.4
1,643,861	+	MPMX19_01566	0.87	+0.5
1,643,861	+	MPMX19_01566	0.87	-1.1
1,643,861	+	MPMX19_01566	0.87	-0.4
1,643,861	+	MPMX19_01566	0.87	-0.0
1,643,861	+	MPMX19_01566	0.87	-0.6
1,643,861	+	MPMX19_01566	0.87	+0.7
1,643,861	+	MPMX19_01566	0.87	-1.6
1,643,861	+	MPMX19_01566	0.87	-0.4
1,643,861	+	MPMX19_01566	0.87	-0.3
1,643,861	+	MPMX19_01566	0.87	-1.1
1,643,861	+	MPMX19_01566	0.87	+0.4
1,643,861	+	MPMX19_01566	0.87	+0.4
1,643,861	+	MPMX19_01566	0.87	+0.3
1,643,861	+	MPMX19_01566	0.87	-0.3
1,643,861	+	MPMX19_01566	0.87	-0.8
1,643,861	+	MPMX19_01566	0.87	-0.8
1,643,861	+	MPMX19_01566	0.87	-0.8
1,643,862	-	MPMX19_01566	0.87	-0.3
1,643,862	-	MPMX19_01566	0.87	+0.0
1,643,862	-	MPMX19_01566	0.87	+0.7
1,643,862	-	MPMX19_01566	0.87	+0.7
1,643,862	-	MPMX19_01566	0.87	+0.6
1,643,862	-	MPMX19_01566	0.87	-0.6
1,643,862	-	MPMX19_01566	0.87	-0.3
1,643,862	-	MPMX19_01566	0.87	+0.0
1,643,862	-	MPMX19_01566	0.87	-0.3
1,643,862	-	MPMX19_01566	0.87	+0.2
1,643,862	-	MPMX19_01566	0.87	-0.3
1,643,862	-	MPMX19_01566	0.87	-0.5
1,643,862	-	MPMX19_01566	0.87	-0.7
1,643,862	-	MPMX19_01566	0.87	+0.7
1,643,862	-	MPMX19_01566	0.87	-0.4
1,643,862	-	MPMX19_01566	0.87	-1.5
1,643,862	-	MPMX19_01566	0.87	-0.9
1,643,862	-	MPMX19_01566	0.87	-0.6
1,643,862	-	MPMX19_01566	0.87	-1.3
1,643,862	-	MPMX19_01566	0.87	+0.5
1,643,862	-	MPMX19_01566	0.87	+0.5
1,643,862	-	MPMX19_01566	0.87	-0.6
1,643,862	-	MPMX19_01566	0.87	+0.1
1,643,862	-	MPMX19_01566	0.87	+0.5
1,643,862	-	MPMX19_01566	0.87	-0.1
1,643,862	-	MPMX19_01566	0.87	-0.2
1,643,862	-	MPMX19_01566	0.87	-0.1
1,643,862	-	MPMX19_01566	0.87	-2.1
1,643,862	-	MPMX19_01566	0.87	+1.1
1,643,885	+			-0.6
1,643,885	+			+0.1
1,643,885	+			+0.0
1,643,885	+			-0.0
1,643,885	+			+0.4
1,643,885	+			-0.0
1,643,885	+			+0.6
1,643,885	+			+0.1
1,643,885	+			+1.1
1,643,886	-			-1.1
1,643,886	-			-1.4
1,643,886	-			-1.1
1,643,886	-			-0.4
1,643,886	-			-1.2
1,643,886	-			-0.3
1,643,886	-			+0.1
1,643,886	-			-0.3
1,643,886	-			-0.6
1,643,886	-			+1.7
1,643,886	-			+0.7
1,643,886	-			-0.9

Or see this region's nucleotide sequence