Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01546 and MPMX19_01547 are separated by 285 nucleotides MPMX19_01547 and MPMX19_01548 are separated by 286 nucleotides
MPMX19_01546: MPMX19_01546 - hypothetical protein, at 1,619,364 to 1,621,436
_01546
MPMX19_01547: MPMX19_01547 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,621,722 to 1,622,984
_01547
MPMX19_01548: MPMX19_01548 - ATP-dependent Clp protease proteolytic subunit, at 1,623,271 to 1,623,897
_01548
Position (kb)
1621
1622
1623 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1620.740 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.847 kb on + strand, within MPMX19_01546 at 1620.848 kb on - strand, within MPMX19_01546 at 1620.848 kb on - strand, within MPMX19_01546 at 1620.848 kb on - strand, within MPMX19_01546 at 1620.848 kb on - strand, within MPMX19_01546 at 1620.848 kb on - strand, within MPMX19_01546 at 1621.153 kb on + strand, within MPMX19_01546 at 1621.153 kb on + strand, within MPMX19_01546 at 1621.154 kb on - strand, within MPMX19_01546 at 1621.154 kb on - strand, within MPMX19_01546 at 1621.154 kb on - strand, within MPMX19_01546 at 1621.414 kb on + strand at 1621.454 kb on - strand at 1621.518 kb on - strand at 1621.550 kb on - strand at 1621.550 kb on - strand at 1621.601 kb on + strand at 1621.602 kb on - strand at 1621.635 kb on - strand at 1621.724 kb on - strand at 1621.724 kb on - strand at 1621.763 kb on - strand at 1621.763 kb on - strand at 1623.060 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.984 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,620,740 + MPMX19_01546 0.66 -1.7 1,620,847 + MPMX19_01546 0.72 -1.2 1,620,847 + MPMX19_01546 0.72 +0.1 1,620,847 + MPMX19_01546 0.72 -0.1 1,620,847 + MPMX19_01546 0.72 -0.2 1,620,847 + MPMX19_01546 0.72 -0.9 1,620,847 + MPMX19_01546 0.72 -0.1 1,620,848 - MPMX19_01546 0.72 -1.1 1,620,848 - MPMX19_01546 0.72 -2.8 1,620,848 - MPMX19_01546 0.72 +0.4 1,620,848 - MPMX19_01546 0.72 +0.9 1,620,848 - MPMX19_01546 0.72 -1.2 1,621,153 + MPMX19_01546 0.86 -0.9 1,621,153 + MPMX19_01546 0.86 -1.7 1,621,154 - MPMX19_01546 0.86 -1.0 1,621,154 - MPMX19_01546 0.86 +0.7 1,621,154 - MPMX19_01546 0.86 +0.3 1,621,414 + -0.1 1,621,454 - +0.0 1,621,518 - +0.4 1,621,550 - -1.4 1,621,550 - +0.1 1,621,601 + +0.4 1,621,602 - -0.5 1,621,635 - -0.1 1,621,724 - -0.0 1,621,724 - +0.4 1,621,763 - +0.6 1,621,763 - -1.1 1,623,060 - -1.2 1,623,959 - -1.4 1,623,959 - +1.5 1,623,959 - +0.4 1,623,959 - -1.9 1,623,959 - -0.0 1,623,959 - -0.7 1,623,959 - +0.3 1,623,959 - +1.2 1,623,959 - -0.1 1,623,959 - -1.4 1,623,959 - -0.4 1,623,959 - -1.6 1,623,959 - +0.1 1,623,959 - -0.0 1,623,959 - +0.1 1,623,961 - +1.0 1,623,961 - -1.9 1,623,961 - -1.4 1,623,961 - -0.3 1,623,961 - -0.4 1,623,961 - -1.3 1,623,961 - -0.4 1,623,961 - -0.0 1,623,961 - +0.4 1,623,984 - -0.9
Or see this region's nucleotide sequence