Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01392 and MPMX19_01393 are separated by 209 nucleotides MPMX19_01393 and MPMX19_01394 are separated by 109 nucleotides MPMX19_01394 and MPMX19_01395 are separated by 173 nucleotides MPMX19_01395 and MPMX19_01396 are separated by 78 nucleotides
MPMX19_01392: MPMX19_01392 - hypothetical protein, at 1,457,558 to 1,459,558
_01392
MPMX19_01393: MPMX19_01393 - hypothetical protein, at 1,459,768 to 1,460,178
_01393
MPMX19_01394: MPMX19_01394 - hypothetical protein, at 1,460,288 to 1,460,722
_01394
MPMX19_01395: MPMX19_01395 - hypothetical protein, at 1,460,896 to 1,461,594
_01395
MPMX19_01396: MPMX19_01396 - hypothetical protein, at 1,461,673 to 1,462,155
_01396
Position (kb)
1460
1461 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.582 kb on + strand at 1459.602 kb on - strand at 1459.612 kb on + strand at 1459.613 kb on - strand at 1459.615 kb on + strand at 1459.616 kb on - strand at 1459.616 kb on - strand at 1459.644 kb on + strand at 1459.650 kb on - strand at 1459.650 kb on - strand at 1459.650 kb on - strand at 1459.961 kb on + strand, within MPMX19_01393 at 1460.009 kb on + strand, within MPMX19_01393 at 1460.009 kb on + strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.010 kb on - strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.090 kb on + strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.091 kb on - strand, within MPMX19_01393 at 1460.476 kb on + strand, within MPMX19_01394 at 1460.476 kb on + strand, within MPMX19_01394 at 1460.477 kb on - strand, within MPMX19_01394 at 1460.477 kb on - strand, within MPMX19_01394 at 1460.764 kb on + strand at 1460.764 kb on + strand at 1460.765 kb on - strand at 1460.765 kb on - strand at 1460.765 kb on - strand at 1460.788 kb on + strand at 1460.788 kb on + strand at 1460.788 kb on + strand at 1460.789 kb on - strand at 1460.789 kb on - strand at 1460.801 kb on + strand at 1460.801 kb on + strand at 1460.801 kb on + strand at 1460.802 kb on - strand at 1460.822 kb on - strand at 1460.850 kb on + strand at 1460.851 kb on - strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.897 kb on + strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1460.898 kb on - strand at 1461.245 kb on + strand, within MPMX19_01395 at 1461.393 kb on - strand, within MPMX19_01395 at 1461.429 kb on + strand, within MPMX19_01395 at 1461.429 kb on + strand, within MPMX19_01395 at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.625 kb on + strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.626 kb on - strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.627 kb on + strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.628 kb on - strand at 1461.711 kb on + strand at 1461.711 kb on + strand at 1461.711 kb on + strand at 1461.711 kb on + strand at 1461.711 kb on + strand at 1461.711 kb on + strand at 1461.712 kb on - strand at 1461.712 kb on - strand at 1461.712 kb on - strand at 1461.712 kb on - strand at 1461.712 kb on - strand at 1461.712 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,459,582 + -1.0 1,459,582 + -0.9 1,459,582 + +1.2 1,459,582 + +1.7 1,459,582 + -1.7 1,459,582 + -0.6 1,459,582 + +1.7 1,459,582 + -0.1 1,459,582 + +0.3 1,459,582 + +0.3 1,459,602 - +0.7 1,459,612 + -0.6 1,459,613 - -0.9 1,459,615 + -0.9 1,459,616 - +1.7 1,459,616 - -0.6 1,459,644 + -0.9 1,459,650 - -1.3 1,459,650 - -0.7 1,459,650 - -0.6 1,459,961 + MPMX19_01393 0.47 -0.1 1,460,009 + MPMX19_01393 0.59 -0.7 1,460,009 + MPMX19_01393 0.59 -0.8 1,460,010 - MPMX19_01393 0.59 -1.7 1,460,010 - MPMX19_01393 0.59 +0.1 1,460,010 - MPMX19_01393 0.59 +0.9 1,460,010 - MPMX19_01393 0.59 -0.3 1,460,010 - MPMX19_01393 0.59 +0.4 1,460,010 - MPMX19_01393 0.59 -1.1 1,460,010 - MPMX19_01393 0.59 +0.1 1,460,090 + MPMX19_01393 0.78 +0.3 1,460,090 + MPMX19_01393 0.78 -0.3 1,460,090 + MPMX19_01393 0.78 +0.4 1,460,090 + MPMX19_01393 0.78 +0.1 1,460,090 + MPMX19_01393 0.78 +1.1 1,460,090 + MPMX19_01393 0.78 -2.1 1,460,091 - MPMX19_01393 0.79 -0.4 1,460,091 - MPMX19_01393 0.79 -0.0 1,460,091 - MPMX19_01393 0.79 -0.3 1,460,091 - MPMX19_01393 0.79 +0.1 1,460,091 - MPMX19_01393 0.79 +0.5 1,460,091 - MPMX19_01393 0.79 -1.1 1,460,091 - MPMX19_01393 0.79 -1.1 1,460,091 - MPMX19_01393 0.79 -0.9 1,460,476 + MPMX19_01394 0.43 -0.4 1,460,476 + MPMX19_01394 0.43 +0.7 1,460,477 - MPMX19_01394 0.43 -0.9 1,460,477 - MPMX19_01394 0.43 -1.6 1,460,764 + +1.0 1,460,764 + +1.3 1,460,765 - +0.7 1,460,765 - -0.3 1,460,765 - +0.4 1,460,788 + +0.1 1,460,788 + +0.1 1,460,788 + -0.3 1,460,789 - -0.3 1,460,789 - -0.5 1,460,801 + -1.3 1,460,801 + -0.9 1,460,801 + +0.2 1,460,802 - +0.5 1,460,822 - -0.7 1,460,850 + +0.2 1,460,851 - +0.2 1,460,897 + -0.6 1,460,897 + +0.6 1,460,897 + -0.6 1,460,897 + -1.1 1,460,897 + -0.1 1,460,897 + -0.3 1,460,897 + -1.5 1,460,897 + -0.3 1,460,897 + -1.7 1,460,897 + -1.4 1,460,897 + +0.7 1,460,897 + -0.0 1,460,898 - -1.0 1,460,898 - -2.5 1,460,898 - -0.0 1,460,898 - +0.3 1,460,898 - -0.7 1,460,898 - -0.3 1,460,898 - +0.1 1,460,898 - -1.9 1,460,898 - -0.7 1,461,245 + MPMX19_01395 0.50 -0.7 1,461,393 - MPMX19_01395 0.71 -0.7 1,461,429 + MPMX19_01395 0.76 -0.4 1,461,429 + MPMX19_01395 0.76 -0.8 1,461,625 + -0.9 1,461,625 + +0.7 1,461,625 + +0.3 1,461,625 + -0.9 1,461,625 + +0.7 1,461,625 + -0.6 1,461,625 + -1.3 1,461,625 + -2.7 1,461,625 + +1.0 1,461,625 + -0.3 1,461,625 + -1.9 1,461,625 + -0.9 1,461,625 + -0.7 1,461,626 - +0.4 1,461,626 - -0.6 1,461,626 - +1.9 1,461,626 - +0.4 1,461,626 - -0.1 1,461,626 - -0.3 1,461,626 - -0.2 1,461,626 - -1.3 1,461,626 - -1.2 1,461,626 - +0.5 1,461,626 - -1.1 1,461,626 - +0.1 1,461,626 - +0.9 1,461,627 + -1.1 1,461,627 + -0.3 1,461,627 + -0.3 1,461,627 + -0.1 1,461,627 + -0.9 1,461,627 + -0.2 1,461,627 + +0.6 1,461,627 + -0.5 1,461,627 + +0.1 1,461,627 + -0.6 1,461,627 + -1.1 1,461,627 + -0.3 1,461,627 + -1.0 1,461,627 + +0.4 1,461,627 + -1.4 1,461,627 + -0.5 1,461,627 + -1.5 1,461,627 + -1.1 1,461,627 + +0.3 1,461,627 + -2.3 1,461,627 + +0.1 1,461,627 + +0.3 1,461,627 + +1.1 1,461,627 + -1.1 1,461,627 + +0.2 1,461,627 + -0.4 1,461,627 + -0.4 1,461,627 + +0.3 1,461,627 + -0.1 1,461,627 + -0.6 1,461,627 + -1.5 1,461,627 + -1.4 1,461,627 + -1.5 1,461,627 + -1.3 1,461,627 + -1.5 1,461,627 + +0.5 1,461,627 + -0.0 1,461,627 + +0.1 1,461,627 + -0.3 1,461,627 + -0.7 1,461,627 + -0.2 1,461,627 + -0.4 1,461,627 + -1.2 1,461,627 + -2.1 1,461,627 + -0.8 1,461,627 + +2.2 1,461,627 + -0.3 1,461,627 + +0.5 1,461,627 + -0.9 1,461,627 + -0.3 1,461,627 + -1.1 1,461,627 + +1.3 1,461,627 + +1.3 1,461,627 + +0.9 1,461,627 + -0.5 1,461,627 + -1.1 1,461,627 + +0.1 1,461,627 + -0.7 1,461,627 + -0.4 1,461,627 + -0.4 1,461,627 + +0.3 1,461,627 + +2.5 1,461,627 + -0.5 1,461,627 + -0.4 1,461,627 + -1.7 1,461,628 - -0.1 1,461,628 - -0.9 1,461,628 - -0.3 1,461,628 - +1.0 1,461,628 - +1.0 1,461,628 - -1.1 1,461,628 - -0.1 1,461,628 - +0.4 1,461,628 - -0.8 1,461,628 - +1.7 1,461,628 - +0.3 1,461,628 - +0.9 1,461,628 - -2.1 1,461,628 - +0.4 1,461,628 - -0.4 1,461,628 - +0.4 1,461,628 - -0.5 1,461,628 - +0.6 1,461,628 - -1.6 1,461,628 - -0.6 1,461,628 - -2.6 1,461,628 - -0.6 1,461,628 - -2.6 1,461,628 - -1.3 1,461,628 - +0.4 1,461,628 - -0.0 1,461,628 - -1.5 1,461,628 - -1.1 1,461,628 - -0.0 1,461,628 - -0.5 1,461,628 - -1.0 1,461,628 - -1.2 1,461,628 - -0.5 1,461,628 - +1.1 1,461,628 - -1.0 1,461,628 - -1.1 1,461,711 + +0.4 1,461,711 + -0.1 1,461,711 + -0.6 1,461,711 + -0.9 1,461,711 + -0.7 1,461,711 + -1.6 1,461,712 - -0.8 1,461,712 - +0.1 1,461,712 - -0.8 1,461,712 - -1.5 1,461,712 - -0.9 1,461,712 - -0.3
Or see this region's nucleotide sequence