Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00952 and MPMX19_00953 are separated by 79 nucleotides MPMX19_00953 and MPMX19_00954 are separated by 213 nucleotides MPMX19_00954 and MPMX19_00955 are separated by 127 nucleotides MPMX19_00955 and MPMX19_00956 are separated by 43 nucleotides MPMX19_00956 and MPMX19_00957 are separated by 261 nucleotides
MPMX19_00952: MPMX19_00952 - hypothetical protein, at 992,441 to 993,295
_00952
MPMX19_00953: MPMX19_00953 - hypothetical protein, at 993,375 to 993,776
_00953
MPMX19_00954: MPMX19_00954 - Cyclic AMP receptor protein, at 993,990 to 994,724
_00954
MPMX19_00955: MPMX19_00955 - hypothetical protein, at 994,852 to 995,049
_00955
MPMX19_00956: MPMX19_00956 - hypothetical protein, at 995,093 to 995,287
_00956
MPMX19_00957: MPMX19_00957 - Phosphoribosyl-ATP pyrophosphatase, at 995,549 to 995,998
_00957
Position (kb) 993
994
995 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 993.009 kb on + strand, within MPMX19_00952 at 993.009 kb on + strand, within MPMX19_00952 at 993.009 kb on + strand, within MPMX19_00952 at 993.009 kb on + strand, within MPMX19_00952 at 993.009 kb on + strand, within MPMX19_00952 at 993.010 kb on - strand, within MPMX19_00952 at 993.010 kb on - strand, within MPMX19_00952 at 993.010 kb on - strand, within MPMX19_00952 at 993.010 kb on - strand, within MPMX19_00952 at 993.024 kb on + strand, within MPMX19_00952 at 993.024 kb on + strand, within MPMX19_00952 at 993.024 kb on + strand, within MPMX19_00952 at 993.024 kb on + strand, within MPMX19_00952 at 993.024 kb on + strand, within MPMX19_00952 at 993.025 kb on - strand, within MPMX19_00952 at 993.025 kb on - strand, within MPMX19_00952 at 993.025 kb on - strand, within MPMX19_00952 at 993.025 kb on - strand, within MPMX19_00952 at 993.050 kb on - strand, within MPMX19_00952 at 993.050 kb on - strand, within MPMX19_00952 at 993.051 kb on + strand, within MPMX19_00952 at 993.051 kb on + strand, within MPMX19_00952 at 993.051 kb on + strand, within MPMX19_00952 at 993.051 kb on + strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.052 kb on - strand, within MPMX19_00952 at 993.086 kb on - strand, within MPMX19_00952 at 993.086 kb on - strand, within MPMX19_00952 at 993.086 kb on - strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.087 kb on + strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.088 kb on - strand, within MPMX19_00952 at 993.135 kb on + strand, within MPMX19_00952 at 993.135 kb on + strand, within MPMX19_00952 at 993.135 kb on + strand, within MPMX19_00952 at 993.136 kb on - strand, within MPMX19_00952 at 993.136 kb on - strand, within MPMX19_00952 at 993.136 kb on - strand, within MPMX19_00952 at 993.197 kb on - strand, within MPMX19_00952 at 993.311 kb on + strand at 993.311 kb on + strand at 993.311 kb on + strand at 993.312 kb on - strand at 993.312 kb on - strand at 993.347 kb on + strand at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.499 kb on + strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.500 kb on - strand, within MPMX19_00953 at 993.586 kb on + strand, within MPMX19_00953 at 993.586 kb on + strand, within MPMX19_00953 at 993.586 kb on + strand, within MPMX19_00953 at 993.586 kb on + strand, within MPMX19_00953 at 993.587 kb on - strand, within MPMX19_00953 at 993.587 kb on - strand, within MPMX19_00953 at 993.879 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.932 kb on + strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.933 kb on - strand at 993.934 kb on - strand at 994.744 kb on + strand at 994.744 kb on + strand at 994.744 kb on + strand at 994.744 kb on + strand at 994.744 kb on + strand at 994.744 kb on + strand at 994.787 kb on + strand at 994.787 kb on + strand at 994.787 kb on + strand at 994.788 kb on - strand at 995.091 kb on + strand at 995.091 kb on + strand at 995.119 kb on - strand, within MPMX19_00956 at 995.119 kb on - strand, within MPMX19_00956 at 995.119 kb on - strand, within MPMX19_00956 at 995.119 kb on - strand, within MPMX19_00956 at 995.181 kb on + strand, within MPMX19_00956 at 995.181 kb on + strand, within MPMX19_00956 at 995.181 kb on + strand, within MPMX19_00956 at 995.181 kb on + strand, within MPMX19_00956 at 995.182 kb on - strand, within MPMX19_00956 at 995.182 kb on - strand, within MPMX19_00956 at 995.182 kb on - strand, within MPMX19_00956 at 995.182 kb on - strand, within MPMX19_00956 at 995.182 kb on - strand, within MPMX19_00956 at 995.317 kb on + strand at 995.317 kb on + strand at 995.317 kb on + strand at 995.317 kb on + strand at 995.317 kb on + strand at 995.317 kb on + strand at 995.317 kb on + strand at 995.318 kb on - strand at 995.318 kb on - strand at 995.318 kb on - strand at 995.318 kb on - strand at 995.318 kb on - strand at 995.319 kb on + strand at 995.384 kb on + strand at 995.384 kb on + strand at 995.384 kb on + strand at 995.384 kb on + strand at 995.384 kb on + strand at 995.384 kb on + strand at 995.385 kb on - strand at 995.385 kb on - strand at 995.385 kb on - strand at 995.385 kb on - strand at 995.386 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.558 kb on + strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.559 kb on - strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.560 kb on + strand at 995.561 kb on - strand at 995.561 kb on - strand at 995.561 kb on - strand at 995.561 kb on - strand at 995.561 kb on - strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.588 kb on + strand at 995.589 kb on - strand at 995.589 kb on - strand at 995.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 993,009 + MPMX19_00952 0.66 -0.3 993,009 + MPMX19_00952 0.66 -1.2 993,009 + MPMX19_00952 0.66 -0.3 993,009 + MPMX19_00952 0.66 +1.3 993,009 + MPMX19_00952 0.66 +0.3 993,010 - MPMX19_00952 0.67 -0.6 993,010 - MPMX19_00952 0.67 -0.3 993,010 - MPMX19_00952 0.67 +0.7 993,010 - MPMX19_00952 0.67 +1.0 993,024 + MPMX19_00952 0.68 +0.1 993,024 + MPMX19_00952 0.68 -0.2 993,024 + MPMX19_00952 0.68 +0.4 993,024 + MPMX19_00952 0.68 +0.1 993,024 + MPMX19_00952 0.68 -0.5 993,025 - MPMX19_00952 0.68 +0.2 993,025 - MPMX19_00952 0.68 +0.3 993,025 - MPMX19_00952 0.68 +0.4 993,025 - MPMX19_00952 0.68 -1.0 993,050 - MPMX19_00952 0.71 +0.7 993,050 - MPMX19_00952 0.71 +0.1 993,051 + MPMX19_00952 0.71 -1.1 993,051 + MPMX19_00952 0.71 -0.3 993,051 + MPMX19_00952 0.71 +0.3 993,051 + MPMX19_00952 0.71 -2.0 993,052 - MPMX19_00952 0.71 -0.1 993,052 - MPMX19_00952 0.71 -0.0 993,052 - MPMX19_00952 0.71 +1.0 993,052 - MPMX19_00952 0.71 +0.3 993,052 - MPMX19_00952 0.71 +0.4 993,052 - MPMX19_00952 0.71 +0.8 993,052 - MPMX19_00952 0.71 +0.0 993,052 - MPMX19_00952 0.71 +0.7 993,086 - MPMX19_00952 0.75 -0.6 993,086 - MPMX19_00952 0.75 +1.4 993,086 - MPMX19_00952 0.75 -2.1 993,087 + MPMX19_00952 0.76 +0.7 993,087 + MPMX19_00952 0.76 -0.6 993,087 + MPMX19_00952 0.76 +0.3 993,087 + MPMX19_00952 0.76 +0.1 993,087 + MPMX19_00952 0.76 -0.6 993,087 + MPMX19_00952 0.76 +0.1 993,087 + MPMX19_00952 0.76 +0.5 993,087 + MPMX19_00952 0.76 -0.0 993,087 + MPMX19_00952 0.76 -0.1 993,087 + MPMX19_00952 0.76 -0.1 993,087 + MPMX19_00952 0.76 -0.1 993,087 + MPMX19_00952 0.76 -0.5 993,087 + MPMX19_00952 0.76 -1.5 993,087 + MPMX19_00952 0.76 -0.1 993,087 + MPMX19_00952 0.76 +0.9 993,087 + MPMX19_00952 0.76 +0.9 993,087 + MPMX19_00952 0.76 -0.5 993,087 + MPMX19_00952 0.76 -2.5 993,088 - MPMX19_00952 0.76 +0.5 993,088 - MPMX19_00952 0.76 -0.9 993,088 - MPMX19_00952 0.76 +0.5 993,088 - MPMX19_00952 0.76 -2.1 993,088 - MPMX19_00952 0.76 +0.2 993,088 - MPMX19_00952 0.76 -0.3 993,088 - MPMX19_00952 0.76 -1.0 993,088 - MPMX19_00952 0.76 +1.7 993,088 - MPMX19_00952 0.76 +1.7 993,088 - MPMX19_00952 0.76 -0.3 993,135 + MPMX19_00952 0.81 +1.5 993,135 + MPMX19_00952 0.81 +0.7 993,135 + MPMX19_00952 0.81 -0.9 993,136 - MPMX19_00952 0.81 -0.6 993,136 - MPMX19_00952 0.81 +1.0 993,136 - MPMX19_00952 0.81 +1.1 993,197 - MPMX19_00952 0.88 +0.2 993,311 + -1.1 993,311 + +0.4 993,311 + -0.7 993,312 - -0.3 993,312 - +1.7 993,347 + -0.3 993,499 + MPMX19_00953 0.31 +0.3 993,499 + MPMX19_00953 0.31 +0.1 993,499 + MPMX19_00953 0.31 -0.1 993,499 + MPMX19_00953 0.31 +0.7 993,499 + MPMX19_00953 0.31 +0.1 993,499 + MPMX19_00953 0.31 +0.2 993,499 + MPMX19_00953 0.31 +0.1 993,500 - MPMX19_00953 0.31 +1.2 993,500 - MPMX19_00953 0.31 -2.1 993,500 - MPMX19_00953 0.31 +1.0 993,500 - MPMX19_00953 0.31 -0.2 993,500 - MPMX19_00953 0.31 -1.1 993,500 - MPMX19_00953 0.31 -0.6 993,500 - MPMX19_00953 0.31 +0.0 993,500 - MPMX19_00953 0.31 +1.2 993,500 - MPMX19_00953 0.31 -0.5 993,500 - MPMX19_00953 0.31 -1.6 993,586 + MPMX19_00953 0.52 -0.2 993,586 + MPMX19_00953 0.52 +1.1 993,586 + MPMX19_00953 0.52 -0.3 993,586 + MPMX19_00953 0.52 -0.5 993,587 - MPMX19_00953 0.53 -0.1 993,587 - MPMX19_00953 0.53 +0.6 993,879 + -2.0 993,932 + +1.2 993,932 + -0.2 993,932 + -0.2 993,932 + -1.3 993,932 + +0.1 993,932 + -1.1 993,932 + -0.9 993,932 + -0.6 993,932 + +0.3 993,932 + +0.0 993,932 + +0.0 993,932 + -1.1 993,932 + -0.6 993,932 + -2.1 993,932 + +0.0 993,932 + -1.6 993,932 + -0.6 993,932 + -0.9 993,932 + +0.7 993,932 + -0.2 993,932 + -0.4 993,932 + -0.3 993,932 + +0.3 993,932 + -1.6 993,933 - +0.2 993,933 - +0.3 993,933 - -0.6 993,933 - -0.3 993,933 - +0.1 993,933 - +0.1 993,933 - -2.4 993,933 - -0.2 993,933 - -1.3 993,933 - -0.7 993,933 - -0.3 993,933 - -1.2 993,933 - -2.3 993,933 - -0.6 993,933 - +1.0 993,933 - -1.3 993,933 - -1.1 993,933 - -1.5 993,933 - -0.6 993,933 - -0.6 993,933 - +1.5 993,933 - +0.6 993,933 - -0.3 993,933 - +0.1 993,933 - -1.6 993,933 - +0.0 993,933 - +0.2 993,933 - -0.8 993,933 - +0.2 993,934 - -0.5 994,744 + -0.5 994,744 + +0.4 994,744 + -0.3 994,744 + +0.4 994,744 + -0.0 994,744 + -0.5 994,787 + -1.3 994,787 + -0.3 994,787 + -0.1 994,788 - -2.1 995,091 + +0.7 995,091 + +0.1 995,119 - MPMX19_00956 0.13 -0.5 995,119 - MPMX19_00956 0.13 -1.3 995,119 - MPMX19_00956 0.13 -0.3 995,119 - MPMX19_00956 0.13 -2.0 995,181 + MPMX19_00956 0.45 +0.7 995,181 + MPMX19_00956 0.45 +1.3 995,181 + MPMX19_00956 0.45 +0.4 995,181 + MPMX19_00956 0.45 +0.9 995,182 - MPMX19_00956 0.46 -1.3 995,182 - MPMX19_00956 0.46 -0.0 995,182 - MPMX19_00956 0.46 +1.4 995,182 - MPMX19_00956 0.46 -0.6 995,182 - MPMX19_00956 0.46 -2.9 995,317 + -0.8 995,317 + +0.4 995,317 + -1.3 995,317 + -1.6 995,317 + -0.2 995,317 + -0.3 995,317 + -0.6 995,318 - +0.5 995,318 - +1.7 995,318 - -1.6 995,318 - +2.1 995,318 - -0.9 995,319 + -0.1 995,384 + +0.6 995,384 + +0.3 995,384 + -0.6 995,384 + -0.2 995,384 + +0.3 995,384 + -0.5 995,385 - +0.5 995,385 - -0.4 995,385 - -0.7 995,385 - -0.4 995,386 + -2.3 995,558 + -0.3 995,558 + -0.2 995,558 + +0.1 995,558 + -0.4 995,558 + -0.3 995,558 + -1.6 995,558 + -0.8 995,558 + +1.3 995,558 + -0.3 995,558 + +0.4 995,558 + -0.5 995,558 + -1.1 995,558 + -0.4 995,558 + +0.0 995,558 + +0.8 995,558 + -0.1 995,558 + -1.0 995,558 + -0.7 995,558 + -0.1 995,558 + -0.1 995,558 + -1.3 995,558 + -0.3 995,559 - -1.9 995,559 - +1.7 995,559 - -0.9 995,559 - +2.2 995,559 - -1.0 995,559 - +1.0 995,559 - -0.3 995,559 - -0.4 995,559 - +0.7 995,559 - -1.2 995,559 - -2.3 995,559 - -0.6 995,559 - -0.4 995,559 - -0.7 995,559 - -2.3 995,559 - +0.0 995,559 - -1.2 995,559 - +0.1 995,559 - +0.9 995,559 - -0.3 995,559 - -0.6 995,559 - -1.6 995,559 - +0.4 995,559 - +0.1 995,559 - +0.1 995,559 - +0.7 995,559 - +1.4 995,560 + -0.3 995,560 + -0.0 995,560 + +0.6 995,560 + -2.4 995,560 + -0.3 995,560 + -0.2 995,560 + +0.1 995,560 + +0.8 995,560 + -1.8 995,561 - +1.3 995,561 - -0.3 995,561 - +0.4 995,561 - -0.9 995,561 - +0.4 995,588 + +0.3 995,588 + +0.1 995,588 + -1.1 995,588 + -0.9 995,588 + +0.3 995,588 + -0.0 995,588 + +1.4 995,589 - +0.4 995,589 - -0.1 995,589 - -0.8
Or see this region's nucleotide sequence