Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00951

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00950 and MPMX19_00951 are separated by 351 nucleotidesMPMX19_00951 and MPMX19_00952 overlap by 49 nucleotidesMPMX19_00952 and MPMX19_00953 are separated by 79 nucleotides MPMX19_00950: MPMX19_00950 - hypothetical protein, at 987,021 to 989,990 _00950 MPMX19_00951: MPMX19_00951 - ATP-dependent DNA helicase RecG, at 990,342 to 992,489 _00951 MPMX19_00952: MPMX19_00952 - hypothetical protein, at 992,441 to 993,295 _00952 MPMX19_00953: MPMX19_00953 - hypothetical protein, at 993,375 to 993,776 _00953 Position (kb) 990 991 992 993Strain fitness (log2 ratio) -2 -1 0 1 2at 989.940 kb on + strandat 989.940 kb on + strandat 989.940 kb on + strandat 989.940 kb on + strandat 989.940 kb on + strandat 989.941 kb on - strandat 989.941 kb on - strandat 989.941 kb on - strandat 989.941 kb on - strandat 989.941 kb on - strandat 990.067 kb on + strandat 990.068 kb on - strandat 990.068 kb on - strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.138 kb on + strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.139 kb on - strandat 990.212 kb on + strandat 990.213 kb on - strandat 990.213 kb on - strandat 990.213 kb on - strandat 990.213 kb on - strandat 990.216 kb on + strandat 990.216 kb on + strandat 990.216 kb on + strandat 990.216 kb on + strandat 990.216 kb on + strandat 990.216 kb on + strandat 990.217 kb on - strandat 990.217 kb on - strandat 990.217 kb on - strandat 990.268 kb on + strandat 990.268 kb on + strandat 990.268 kb on + strandat 990.268 kb on + strandat 990.268 kb on + strandat 990.268 kb on + strandat 990.269 kb on - strandat 990.269 kb on - strandat 990.269 kb on - strandat 990.269 kb on - strandat 990.269 kb on - strandat 990.269 kb on - strandat 990.269 kb on - strandat 991.074 kb on + strand, within MPMX19_00951at 991.239 kb on + strand, within MPMX19_00951at 991.239 kb on + strand, within MPMX19_00951at 991.239 kb on + strand, within MPMX19_00951at 991.239 kb on + strand, within MPMX19_00951at 991.240 kb on - strand, within MPMX19_00951at 991.240 kb on - strand, within MPMX19_00951at 992.443 kb on - strandat 992.649 kb on + strand, within MPMX19_00952at 992.650 kb on - strand, within MPMX19_00952at 992.650 kb on - strand, within MPMX19_00952at 992.781 kb on + strand, within MPMX19_00952at 992.782 kb on - strand, within MPMX19_00952at 992.859 kb on + strand, within MPMX19_00952at 992.859 kb on + strand, within MPMX19_00952at 992.859 kb on + strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.860 kb on - strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.928 kb on + strand, within MPMX19_00952at 992.929 kb on - strand, within MPMX19_00952at 992.929 kb on - strand, within MPMX19_00952at 992.929 kb on - strand, within MPMX19_00952at 992.929 kb on - strand, within MPMX19_00952at 993.009 kb on + strand, within MPMX19_00952at 993.009 kb on + strand, within MPMX19_00952at 993.009 kb on + strand, within MPMX19_00952at 993.009 kb on + strand, within MPMX19_00952at 993.009 kb on + strand, within MPMX19_00952at 993.010 kb on - strand, within MPMX19_00952at 993.010 kb on - strand, within MPMX19_00952at 993.010 kb on - strand, within MPMX19_00952at 993.010 kb on - strand, within MPMX19_00952at 993.024 kb on + strand, within MPMX19_00952at 993.024 kb on + strand, within MPMX19_00952at 993.024 kb on + strand, within MPMX19_00952at 993.024 kb on + strand, within MPMX19_00952at 993.024 kb on + strand, within MPMX19_00952at 993.025 kb on - strand, within MPMX19_00952at 993.025 kb on - strand, within MPMX19_00952at 993.025 kb on - strand, within MPMX19_00952at 993.025 kb on - strand, within MPMX19_00952at 993.050 kb on - strand, within MPMX19_00952at 993.050 kb on - strand, within MPMX19_00952at 993.051 kb on + strand, within MPMX19_00952at 993.051 kb on + strand, within MPMX19_00952at 993.051 kb on + strand, within MPMX19_00952at 993.051 kb on + strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.052 kb on - strand, within MPMX19_00952at 993.086 kb on - strand, within MPMX19_00952at 993.086 kb on - strand, within MPMX19_00952at 993.086 kb on - strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.087 kb on + strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.088 kb on - strand, within MPMX19_00952at 993.135 kb on + strand, within MPMX19_00952at 993.135 kb on + strand, within MPMX19_00952at 993.135 kb on + strand, within MPMX19_00952at 993.136 kb on - strand, within MPMX19_00952at 993.136 kb on - strand, within MPMX19_00952at 993.136 kb on - strand, within MPMX19_00952at 993.197 kb on - strand, within MPMX19_00952at 993.311 kb on + strandat 993.311 kb on + strandat 993.311 kb on + strandat 993.312 kb on - strandat 993.312 kb on - strandat 993.347 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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989,940 + -0.4
989,940 + +1.2
989,940 + -0.2
989,940 + -0.5
989,940 + -0.1
989,941 - +0.2
989,941 - -0.0
989,941 - -0.3
989,941 - +0.1
989,941 - -0.5
990,067 + -0.8
990,068 - -0.1
990,068 - +0.8
990,138 + +1.0
990,138 + +0.1
990,138 + -0.6
990,138 + -2.0
990,138 + -0.7
990,138 + -0.8
990,138 + +0.5
990,138 + +0.3
990,138 + -0.1
990,138 + -0.6
990,138 + -0.7
990,138 + -0.4
990,138 + -0.1
990,139 - -1.5
990,139 - -0.7
990,139 - -0.2
990,139 - -0.5
990,139 - -1.5
990,139 - -0.3
990,139 - -0.0
990,139 - -2.5
990,139 - +0.7
990,139 - -0.3
990,139 - -2.0
990,139 - -2.2
990,212 + -0.9
990,213 - +0.5
990,213 - -1.9
990,213 - -0.5
990,213 - -1.1
990,216 + -0.7
990,216 + -1.2
990,216 + -2.1
990,216 + -1.6
990,216 + +1.1
990,216 + -1.0
990,217 - -0.3
990,217 - -1.4
990,217 - -0.0
990,268 + -0.6
990,268 + -2.3
990,268 + +0.3
990,268 + -0.6
990,268 + +0.0
990,268 + -0.5
990,269 - -2.3
990,269 - +1.3
990,269 - +0.8
990,269 - -0.9
990,269 - -0.3
990,269 - -0.6
990,269 - +0.3
991,074 + MPMX19_00951 0.34 -0.9
991,239 + MPMX19_00951 0.42 -0.6
991,239 + MPMX19_00951 0.42 -0.9
991,239 + MPMX19_00951 0.42 +0.5
991,239 + MPMX19_00951 0.42 +0.5
991,240 - MPMX19_00951 0.42 +1.3
991,240 - MPMX19_00951 0.42 -1.8
992,443 - -0.1
992,649 + MPMX19_00952 0.24 -0.2
992,650 - MPMX19_00952 0.24 +0.1
992,650 - MPMX19_00952 0.24 -0.5
992,781 + MPMX19_00952 0.40 +0.1
992,782 - MPMX19_00952 0.40 +0.1
992,859 + MPMX19_00952 0.49 +0.5
992,859 + MPMX19_00952 0.49 -0.4
992,859 + MPMX19_00952 0.49 -0.6
992,860 - MPMX19_00952 0.49 +0.1
992,860 - MPMX19_00952 0.49 +0.7
992,860 - MPMX19_00952 0.49 +0.7
992,860 - MPMX19_00952 0.49 -1.5
992,860 - MPMX19_00952 0.49 -1.4
992,860 - MPMX19_00952 0.49 -0.3
992,860 - MPMX19_00952 0.49 -0.9
992,860 - MPMX19_00952 0.49 +0.3
992,860 - MPMX19_00952 0.49 -0.6
992,860 - MPMX19_00952 0.49 -0.9
992,928 + MPMX19_00952 0.57 -2.6
992,928 + MPMX19_00952 0.57 -0.2
992,928 + MPMX19_00952 0.57 +2.1
992,928 + MPMX19_00952 0.57 +0.4
992,928 + MPMX19_00952 0.57 -0.9
992,928 + MPMX19_00952 0.57 +0.2
992,928 + MPMX19_00952 0.57 -0.9
992,929 - MPMX19_00952 0.57 +0.1
992,929 - MPMX19_00952 0.57 -0.8
992,929 - MPMX19_00952 0.57 -1.1
992,929 - MPMX19_00952 0.57 -1.0
993,009 + MPMX19_00952 0.66 -0.3
993,009 + MPMX19_00952 0.66 -1.2
993,009 + MPMX19_00952 0.66 -0.3
993,009 + MPMX19_00952 0.66 +1.3
993,009 + MPMX19_00952 0.66 +0.3
993,010 - MPMX19_00952 0.67 -0.6
993,010 - MPMX19_00952 0.67 -0.3
993,010 - MPMX19_00952 0.67 +0.7
993,010 - MPMX19_00952 0.67 +1.0
993,024 + MPMX19_00952 0.68 +0.1
993,024 + MPMX19_00952 0.68 -0.2
993,024 + MPMX19_00952 0.68 +0.4
993,024 + MPMX19_00952 0.68 +0.1
993,024 + MPMX19_00952 0.68 -0.5
993,025 - MPMX19_00952 0.68 +0.2
993,025 - MPMX19_00952 0.68 +0.3
993,025 - MPMX19_00952 0.68 +0.4
993,025 - MPMX19_00952 0.68 -1.0
993,050 - MPMX19_00952 0.71 +0.7
993,050 - MPMX19_00952 0.71 +0.1
993,051 + MPMX19_00952 0.71 -1.1
993,051 + MPMX19_00952 0.71 -0.3
993,051 + MPMX19_00952 0.71 +0.3
993,051 + MPMX19_00952 0.71 -2.0
993,052 - MPMX19_00952 0.71 -0.1
993,052 - MPMX19_00952 0.71 -0.0
993,052 - MPMX19_00952 0.71 +1.0
993,052 - MPMX19_00952 0.71 +0.3
993,052 - MPMX19_00952 0.71 +0.4
993,052 - MPMX19_00952 0.71 +0.8
993,052 - MPMX19_00952 0.71 +0.0
993,052 - MPMX19_00952 0.71 +0.7
993,086 - MPMX19_00952 0.75 -0.6
993,086 - MPMX19_00952 0.75 +1.4
993,086 - MPMX19_00952 0.75 -2.1
993,087 + MPMX19_00952 0.76 +0.7
993,087 + MPMX19_00952 0.76 -0.6
993,087 + MPMX19_00952 0.76 +0.3
993,087 + MPMX19_00952 0.76 +0.1
993,087 + MPMX19_00952 0.76 -0.6
993,087 + MPMX19_00952 0.76 +0.1
993,087 + MPMX19_00952 0.76 +0.5
993,087 + MPMX19_00952 0.76 -0.0
993,087 + MPMX19_00952 0.76 -0.1
993,087 + MPMX19_00952 0.76 -0.1
993,087 + MPMX19_00952 0.76 -0.1
993,087 + MPMX19_00952 0.76 -0.5
993,087 + MPMX19_00952 0.76 -1.5
993,087 + MPMX19_00952 0.76 -0.1
993,087 + MPMX19_00952 0.76 +0.9
993,087 + MPMX19_00952 0.76 +0.9
993,087 + MPMX19_00952 0.76 -0.5
993,087 + MPMX19_00952 0.76 -2.5
993,088 - MPMX19_00952 0.76 +0.5
993,088 - MPMX19_00952 0.76 -0.9
993,088 - MPMX19_00952 0.76 +0.5
993,088 - MPMX19_00952 0.76 -2.1
993,088 - MPMX19_00952 0.76 +0.2
993,088 - MPMX19_00952 0.76 -0.3
993,088 - MPMX19_00952 0.76 -1.0
993,088 - MPMX19_00952 0.76 +1.7
993,088 - MPMX19_00952 0.76 +1.7
993,088 - MPMX19_00952 0.76 -0.3
993,135 + MPMX19_00952 0.81 +1.5
993,135 + MPMX19_00952 0.81 +0.7
993,135 + MPMX19_00952 0.81 -0.9
993,136 - MPMX19_00952 0.81 -0.6
993,136 - MPMX19_00952 0.81 +1.0
993,136 - MPMX19_00952 0.81 +1.1
993,197 - MPMX19_00952 0.88 +0.2
993,311 + -1.1
993,311 + +0.4
993,311 + -0.7
993,312 - -0.3
993,312 - +1.7
993,347 + -0.3

Or see this region's nucleotide sequence