Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00940

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00938 and MPMX19_00939 are separated by 188 nucleotidesMPMX19_00939 and MPMX19_00940 are separated by 127 nucleotidesMPMX19_00940 and MPMX19_00941 are separated by 49 nucleotides MPMX19_00938: MPMX19_00938 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 975,055 to 975,792 _00938 MPMX19_00939: MPMX19_00939 - Acyl carrier protein, at 975,981 to 976,220 _00939 MPMX19_00940: MPMX19_00940 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 976,348 to 977,610 _00940 MPMX19_00941: MPMX19_00941 - Endolytic murein transglycosylase, at 977,660 to 978,667 _00941 Position (kb) 976 977 978Strain fitness (log2 ratio) -2 -1 0 1at 976.319 kb on + strandat 976.319 kb on + strandat 976.319 kb on + strandat 976.319 kb on + strandat 977.918 kb on + strand, within MPMX19_00941at 977.918 kb on + strand, within MPMX19_00941at 977.918 kb on + strand, within MPMX19_00941at 977.919 kb on - strand, within MPMX19_00941at 977.919 kb on - strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.110 kb on + strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.111 kb on - strand, within MPMX19_00941at 978.122 kb on + strand, within MPMX19_00941at 978.122 kb on + strand, within MPMX19_00941at 978.123 kb on - strand, within MPMX19_00941at 978.123 kb on - strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.362 kb on + strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.363 kb on - strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.434 kb on + strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.435 kb on - strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.443 kb on + strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.444 kb on - strand, within MPMX19_00941at 978.536 kb on + strand, within MPMX19_00941at 978.536 kb on + strand, within MPMX19_00941at 978.537 kb on - strand, within MPMX19_00941at 978.537 kb on - strand, within MPMX19_00941at 978.537 kb on - strand, within MPMX19_00941at 978.537 kb on - strand, within MPMX19_00941at 978.537 kb on - strand, within MPMX19_00941

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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976,319 + -0.9
976,319 + +0.1
976,319 + +1.3
976,319 + -0.3
977,918 + MPMX19_00941 0.26 -0.4
977,918 + MPMX19_00941 0.26 -0.5
977,918 + MPMX19_00941 0.26 +1.2
977,919 - MPMX19_00941 0.26 +1.5
977,919 - MPMX19_00941 0.26 -0.6
978,110 + MPMX19_00941 0.45 +0.4
978,110 + MPMX19_00941 0.45 +0.5
978,110 + MPMX19_00941 0.45 +0.1
978,110 + MPMX19_00941 0.45 -2.7
978,110 + MPMX19_00941 0.45 -0.3
978,110 + MPMX19_00941 0.45 +1.1
978,110 + MPMX19_00941 0.45 -0.3
978,110 + MPMX19_00941 0.45 +0.7
978,111 - MPMX19_00941 0.45 -0.4
978,111 - MPMX19_00941 0.45 -0.1
978,111 - MPMX19_00941 0.45 -1.5
978,111 - MPMX19_00941 0.45 -0.1
978,111 - MPMX19_00941 0.45 -1.9
978,111 - MPMX19_00941 0.45 +0.3
978,111 - MPMX19_00941 0.45 -1.4
978,111 - MPMX19_00941 0.45 +1.2
978,122 + MPMX19_00941 0.46 -1.1
978,122 + MPMX19_00941 0.46 +0.2
978,123 - MPMX19_00941 0.46 -0.3
978,123 - MPMX19_00941 0.46 +0.5
978,362 + MPMX19_00941 0.70 +0.2
978,362 + MPMX19_00941 0.70 -0.3
978,362 + MPMX19_00941 0.70 -1.4
978,362 + MPMX19_00941 0.70 -1.6
978,362 + MPMX19_00941 0.70 +0.3
978,362 + MPMX19_00941 0.70 +1.5
978,362 + MPMX19_00941 0.70 +1.7
978,362 + MPMX19_00941 0.70 -0.3
978,362 + MPMX19_00941 0.70 -2.2
978,362 + MPMX19_00941 0.70 -0.2
978,362 + MPMX19_00941 0.70 -0.3
978,362 + MPMX19_00941 0.70 -1.0
978,362 + MPMX19_00941 0.70 +1.7
978,362 + MPMX19_00941 0.70 -1.8
978,362 + MPMX19_00941 0.70 -0.1
978,362 + MPMX19_00941 0.70 -2.0
978,362 + MPMX19_00941 0.70 -0.7
978,362 + MPMX19_00941 0.70 -0.9
978,362 + MPMX19_00941 0.70 -0.2
978,362 + MPMX19_00941 0.70 -0.5
978,362 + MPMX19_00941 0.70 -0.5
978,362 + MPMX19_00941 0.70 +0.7
978,362 + MPMX19_00941 0.70 -0.7
978,362 + MPMX19_00941 0.70 -0.6
978,362 + MPMX19_00941 0.70 -0.0
978,362 + MPMX19_00941 0.70 +0.1
978,363 - MPMX19_00941 0.70 -0.3
978,363 - MPMX19_00941 0.70 +0.0
978,363 - MPMX19_00941 0.70 -0.4
978,363 - MPMX19_00941 0.70 -0.1
978,363 - MPMX19_00941 0.70 +1.0
978,363 - MPMX19_00941 0.70 +0.1
978,363 - MPMX19_00941 0.70 -0.8
978,363 - MPMX19_00941 0.70 +1.0
978,363 - MPMX19_00941 0.70 +1.1
978,363 - MPMX19_00941 0.70 +0.3
978,363 - MPMX19_00941 0.70 -0.5
978,363 - MPMX19_00941 0.70 -1.6
978,363 - MPMX19_00941 0.70 +0.4
978,363 - MPMX19_00941 0.70 -0.6
978,363 - MPMX19_00941 0.70 +0.7
978,363 - MPMX19_00941 0.70 -1.2
978,363 - MPMX19_00941 0.70 +0.9
978,434 + MPMX19_00941 0.77 -1.8
978,434 + MPMX19_00941 0.77 -0.4
978,434 + MPMX19_00941 0.77 -0.2
978,434 + MPMX19_00941 0.77 -0.0
978,434 + MPMX19_00941 0.77 -1.6
978,434 + MPMX19_00941 0.77 +0.3
978,435 - MPMX19_00941 0.77 -1.1
978,435 - MPMX19_00941 0.77 +0.7
978,435 - MPMX19_00941 0.77 +0.4
978,435 - MPMX19_00941 0.77 -1.8
978,435 - MPMX19_00941 0.77 +1.0
978,435 - MPMX19_00941 0.77 -0.5
978,435 - MPMX19_00941 0.77 -1.1
978,443 + MPMX19_00941 0.78 -0.9
978,443 + MPMX19_00941 0.78 -1.8
978,443 + MPMX19_00941 0.78 +0.1
978,443 + MPMX19_00941 0.78 +1.0
978,443 + MPMX19_00941 0.78 +0.2
978,443 + MPMX19_00941 0.78 -0.4
978,443 + MPMX19_00941 0.78 +0.0
978,443 + MPMX19_00941 0.78 -0.8
978,443 + MPMX19_00941 0.78 +0.4
978,443 + MPMX19_00941 0.78 -0.4
978,443 + MPMX19_00941 0.78 -0.8
978,443 + MPMX19_00941 0.78 +1.2
978,443 + MPMX19_00941 0.78 -0.4
978,443 + MPMX19_00941 0.78 -1.6
978,443 + MPMX19_00941 0.78 -0.0
978,443 + MPMX19_00941 0.78 -0.3
978,443 + MPMX19_00941 0.78 +0.9
978,443 + MPMX19_00941 0.78 +0.0
978,443 + MPMX19_00941 0.78 +0.3
978,443 + MPMX19_00941 0.78 -0.7
978,443 + MPMX19_00941 0.78 +0.4
978,443 + MPMX19_00941 0.78 -1.2
978,443 + MPMX19_00941 0.78 -1.1
978,443 + MPMX19_00941 0.78 +1.4
978,443 + MPMX19_00941 0.78 -0.3
978,443 + MPMX19_00941 0.78 +0.5
978,443 + MPMX19_00941 0.78 +0.7
978,443 + MPMX19_00941 0.78 -0.6
978,443 + MPMX19_00941 0.78 +0.7
978,443 + MPMX19_00941 0.78 -1.4
978,443 + MPMX19_00941 0.78 -0.6
978,443 + MPMX19_00941 0.78 -0.2
978,443 + MPMX19_00941 0.78 -0.0
978,443 + MPMX19_00941 0.78 +0.7
978,443 + MPMX19_00941 0.78 -1.6
978,443 + MPMX19_00941 0.78 +0.9
978,443 + MPMX19_00941 0.78 -1.5
978,443 + MPMX19_00941 0.78 -1.9
978,443 + MPMX19_00941 0.78 +0.1
978,443 + MPMX19_00941 0.78 -0.3
978,444 - MPMX19_00941 0.78 -0.6
978,444 - MPMX19_00941 0.78 -1.0
978,444 - MPMX19_00941 0.78 -0.6
978,444 - MPMX19_00941 0.78 +1.2
978,444 - MPMX19_00941 0.78 -0.8
978,444 - MPMX19_00941 0.78 -0.3
978,444 - MPMX19_00941 0.78 -0.5
978,444 - MPMX19_00941 0.78 -1.2
978,444 - MPMX19_00941 0.78 -2.0
978,444 - MPMX19_00941 0.78 +0.1
978,444 - MPMX19_00941 0.78 -1.0
978,444 - MPMX19_00941 0.78 +1.2
978,444 - MPMX19_00941 0.78 +0.5
978,444 - MPMX19_00941 0.78 -2.4
978,444 - MPMX19_00941 0.78 +1.4
978,444 - MPMX19_00941 0.78 -0.0
978,444 - MPMX19_00941 0.78 -1.0
978,444 - MPMX19_00941 0.78 -0.2
978,444 - MPMX19_00941 0.78 -0.7
978,444 - MPMX19_00941 0.78 -0.3
978,444 - MPMX19_00941 0.78 -0.8
978,444 - MPMX19_00941 0.78 -0.5
978,444 - MPMX19_00941 0.78 +0.0
978,444 - MPMX19_00941 0.78 +0.7
978,444 - MPMX19_00941 0.78 -0.3
978,444 - MPMX19_00941 0.78 +0.5
978,444 - MPMX19_00941 0.78 -1.6
978,444 - MPMX19_00941 0.78 -1.7
978,444 - MPMX19_00941 0.78 -0.1
978,444 - MPMX19_00941 0.78 -1.0
978,444 - MPMX19_00941 0.78 -0.7
978,444 - MPMX19_00941 0.78 +0.1
978,444 - MPMX19_00941 0.78 -0.9
978,444 - MPMX19_00941 0.78 -1.3
978,444 - MPMX19_00941 0.78 -1.8
978,444 - MPMX19_00941 0.78 -0.0
978,444 - MPMX19_00941 0.78 -1.1
978,444 - MPMX19_00941 0.78 +1.4
978,444 - MPMX19_00941 0.78 +0.7
978,444 - MPMX19_00941 0.78 -0.3
978,444 - MPMX19_00941 0.78 -0.8
978,444 - MPMX19_00941 0.78 +0.9
978,444 - MPMX19_00941 0.78 +0.5
978,444 - MPMX19_00941 0.78 -0.0
978,444 - MPMX19_00941 0.78 -0.9
978,536 + MPMX19_00941 0.87 -0.9
978,536 + MPMX19_00941 0.87 -0.6
978,537 - MPMX19_00941 0.87 -1.2
978,537 - MPMX19_00941 0.87 -0.5
978,537 - MPMX19_00941 0.87 +0.3
978,537 - MPMX19_00941 0.87 -0.4
978,537 - MPMX19_00941 0.87 -1.0

Or see this region's nucleotide sequence