Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00933 and MPMX19_00934 are separated by 49 nucleotides MPMX19_00934 and MPMX19_00935 are separated by 0 nucleotides MPMX19_00935 and MPMX19_00936 are separated by 426 nucleotides
MPMX19_00933: MPMX19_00933 - hypothetical protein, at 970,682 to 971,641
_00933
MPMX19_00934: MPMX19_00934 - 30S ribosomal protein S18, at 971,691 to 971,960
_00934
MPMX19_00935: MPMX19_00935 - 30S ribosomal protein S6, at 971,961 to 972,401
_00935
MPMX19_00936: MPMX19_00936 - hypothetical protein, at 972,828 to 973,814
_00936
Position (kb) 971
972
973 Strain fitness (log2 ratio) -2
-1
0
1 at 971.401 kb on - strand, within MPMX19_00933 at 972.575 kb on - strand at 972.585 kb on + strand at 972.585 kb on + strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.656 kb on + strand at 972.689 kb on + strand at 972.689 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.719 kb on + strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.720 kb on - strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.765 kb on + strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.766 kb on - strand at 972.823 kb on + strand at 972.823 kb on + strand at 972.823 kb on + strand at 972.823 kb on + strand at 972.824 kb on - strand at 972.824 kb on - strand at 972.824 kb on - strand at 972.824 kb on - strand at 972.824 kb on - strand at 972.849 kb on + strand at 972.849 kb on + strand at 972.849 kb on + strand at 972.850 kb on - strand at 972.897 kb on + strand at 972.897 kb on + strand at 972.898 kb on - strand at 972.898 kb on - strand at 972.898 kb on - strand at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.951 kb on + strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.952 kb on - strand, within MPMX19_00936 at 972.958 kb on - strand, within MPMX19_00936 at 972.958 kb on - strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.986 kb on + strand, within MPMX19_00936 at 972.987 kb on - strand, within MPMX19_00936 at 972.987 kb on - strand, within MPMX19_00936 at 972.987 kb on - strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.020 kb on + strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.021 kb on - strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.119 kb on + strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.120 kb on - strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.185 kb on + strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.186 kb on - strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.191 kb on + strand, within MPMX19_00936 at 973.192 kb on - strand, within MPMX19_00936 at 973.192 kb on - strand, within MPMX19_00936 at 973.192 kb on - strand, within MPMX19_00936 at 973.192 kb on - strand, within MPMX19_00936 at 973.192 kb on - strand, within MPMX19_00936 at 973.197 kb on + strand, within MPMX19_00936 at 973.197 kb on + strand, within MPMX19_00936 at 973.197 kb on + strand, within MPMX19_00936 at 973.198 kb on - strand, within MPMX19_00936 at 973.198 kb on - strand, within MPMX19_00936 at 973.198 kb on - strand, within MPMX19_00936 at 973.212 kb on + strand, within MPMX19_00936 at 973.212 kb on + strand, within MPMX19_00936 at 973.212 kb on + strand, within MPMX19_00936 at 973.212 kb on + strand, within MPMX19_00936 at 973.213 kb on - strand, within MPMX19_00936 at 973.213 kb on - strand, within MPMX19_00936 at 973.349 kb on + strand, within MPMX19_00936 at 973.349 kb on + strand, within MPMX19_00936 at 973.349 kb on + strand, within MPMX19_00936 at 973.349 kb on + strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936 at 973.350 kb on - strand, within MPMX19_00936
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 971,401 - MPMX19_00933 0.75 -0.2 972,575 - +0.1 972,585 + -0.8 972,585 + +1.4 972,586 - -1.3 972,586 - -0.6 972,586 - -0.3 972,586 - +0.2 972,586 - -0.6 972,656 + -1.1 972,689 + +0.1 972,689 + -1.9 972,719 + -0.3 972,719 + +0.7 972,719 + +0.1 972,719 + +0.7 972,719 + -2.1 972,719 + -0.1 972,719 + -1.9 972,719 + -1.5 972,719 + +0.1 972,719 + +1.2 972,719 + -0.6 972,719 + -2.2 972,719 + +0.3 972,719 + -0.3 972,719 + +0.5 972,719 + -0.4 972,719 + -1.0 972,720 - -0.6 972,720 - -1.6 972,720 - -1.6 972,720 - +0.5 972,720 - -1.1 972,720 - -0.6 972,720 - +0.2 972,720 - -0.2 972,720 - +1.0 972,720 - +1.4 972,720 - +0.3 972,720 - +1.1 972,720 - -1.2 972,720 - -2.1 972,720 - -0.7 972,720 - +0.3 972,720 - -1.6 972,720 - -0.4 972,720 - +0.4 972,720 - +0.7 972,720 - +0.0 972,720 - -0.3 972,720 - +1.5 972,720 - -2.6 972,720 - -0.3 972,720 - +0.8 972,720 - -0.7 972,720 - -1.8 972,765 + +0.4 972,765 + +0.0 972,765 + +0.9 972,765 + -1.6 972,765 + -1.6 972,765 + -0.3 972,765 + -0.8 972,765 + -0.1 972,765 + -0.2 972,765 + -0.6 972,765 + -0.1 972,765 + -0.3 972,765 + -0.6 972,765 + -0.6 972,765 + -1.6 972,765 + -0.4 972,765 + -0.0 972,765 + -1.7 972,765 + +0.5 972,765 + -1.3 972,765 + +0.4 972,765 + -0.8 972,765 + -1.3 972,765 + +1.0 972,765 + -0.5 972,766 - -0.1 972,766 - -0.6 972,766 - -0.5 972,766 - +0.8 972,766 - +1.4 972,766 - -0.1 972,766 - -1.4 972,766 - -0.2 972,766 - -2.5 972,766 - -0.9 972,766 - +1.7 972,766 - -0.8 972,766 - +0.9 972,766 - -1.3 972,766 - +0.4 972,766 - +0.2 972,766 - +0.0 972,766 - -1.1 972,766 - -0.3 972,766 - +0.3 972,766 - -1.6 972,766 - -0.7 972,766 - +0.1 972,766 - +0.9 972,766 - -1.5 972,766 - -0.1 972,823 + -1.4 972,823 + -0.6 972,823 + -0.6 972,823 + +0.7 972,824 - -0.3 972,824 - +0.3 972,824 - +0.3 972,824 - -1.7 972,824 - +0.0 972,849 + -0.5 972,849 + -1.5 972,849 + +0.6 972,850 - -0.3 972,897 + -1.2 972,897 + -1.3 972,898 - -1.3 972,898 - -0.1 972,898 - -1.9 972,951 + MPMX19_00936 0.12 +0.7 972,951 + MPMX19_00936 0.12 -0.2 972,951 + MPMX19_00936 0.12 -2.4 972,951 + MPMX19_00936 0.12 +0.3 972,951 + MPMX19_00936 0.12 -0.5 972,951 + MPMX19_00936 0.12 -0.1 972,951 + MPMX19_00936 0.12 -1.3 972,951 + MPMX19_00936 0.12 -2.0 972,951 + MPMX19_00936 0.12 -0.0 972,952 - MPMX19_00936 0.13 -0.3 972,952 - MPMX19_00936 0.13 +0.6 972,952 - MPMX19_00936 0.13 -0.5 972,952 - MPMX19_00936 0.13 -0.9 972,952 - MPMX19_00936 0.13 +0.1 972,952 - MPMX19_00936 0.13 -1.1 972,952 - MPMX19_00936 0.13 +0.7 972,958 - MPMX19_00936 0.13 -0.2 972,958 - MPMX19_00936 0.13 +0.1 972,986 + MPMX19_00936 0.16 -0.0 972,986 + MPMX19_00936 0.16 -1.0 972,986 + MPMX19_00936 0.16 +0.9 972,986 + MPMX19_00936 0.16 -0.1 972,986 + MPMX19_00936 0.16 +0.1 972,986 + MPMX19_00936 0.16 +0.7 972,986 + MPMX19_00936 0.16 +0.2 972,987 - MPMX19_00936 0.16 +0.1 972,987 - MPMX19_00936 0.16 -1.8 972,987 - MPMX19_00936 0.16 -0.9 973,020 + MPMX19_00936 0.19 -0.8 973,020 + MPMX19_00936 0.19 +1.4 973,020 + MPMX19_00936 0.19 -0.6 973,020 + MPMX19_00936 0.19 -0.6 973,020 + MPMX19_00936 0.19 +0.5 973,020 + MPMX19_00936 0.19 -0.4 973,020 + MPMX19_00936 0.19 -0.5 973,021 - MPMX19_00936 0.20 -0.2 973,021 - MPMX19_00936 0.20 -0.9 973,021 - MPMX19_00936 0.20 +1.0 973,021 - MPMX19_00936 0.20 -0.1 973,021 - MPMX19_00936 0.20 -1.2 973,021 - MPMX19_00936 0.20 -1.0 973,021 - MPMX19_00936 0.20 -0.6 973,021 - MPMX19_00936 0.20 -0.7 973,021 - MPMX19_00936 0.20 -1.1 973,021 - MPMX19_00936 0.20 +0.2 973,119 + MPMX19_00936 0.29 -1.3 973,119 + MPMX19_00936 0.29 -1.5 973,119 + MPMX19_00936 0.29 -0.8 973,119 + MPMX19_00936 0.29 -0.6 973,119 + MPMX19_00936 0.29 -0.4 973,119 + MPMX19_00936 0.29 -1.2 973,119 + MPMX19_00936 0.29 -0.5 973,120 - MPMX19_00936 0.30 -0.6 973,120 - MPMX19_00936 0.30 -1.5 973,120 - MPMX19_00936 0.30 -0.1 973,120 - MPMX19_00936 0.30 +0.3 973,120 - MPMX19_00936 0.30 -1.9 973,120 - MPMX19_00936 0.30 -1.3 973,120 - MPMX19_00936 0.30 -0.1 973,120 - MPMX19_00936 0.30 +0.6 973,120 - MPMX19_00936 0.30 -1.2 973,120 - MPMX19_00936 0.30 -0.3 973,185 + MPMX19_00936 0.36 -0.3 973,185 + MPMX19_00936 0.36 -0.6 973,185 + MPMX19_00936 0.36 -0.7 973,185 + MPMX19_00936 0.36 +1.2 973,185 + MPMX19_00936 0.36 +0.7 973,185 + MPMX19_00936 0.36 +0.4 973,185 + MPMX19_00936 0.36 -0.2 973,185 + MPMX19_00936 0.36 -1.0 973,185 + MPMX19_00936 0.36 -2.1 973,185 + MPMX19_00936 0.36 +0.9 973,185 + MPMX19_00936 0.36 +1.3 973,185 + MPMX19_00936 0.36 +0.8 973,185 + MPMX19_00936 0.36 -1.3 973,185 + MPMX19_00936 0.36 -1.5 973,185 + MPMX19_00936 0.36 -2.3 973,185 + MPMX19_00936 0.36 -0.5 973,186 - MPMX19_00936 0.36 -2.0 973,186 - MPMX19_00936 0.36 +0.4 973,186 - MPMX19_00936 0.36 +0.1 973,186 - MPMX19_00936 0.36 +0.3 973,186 - MPMX19_00936 0.36 -1.0 973,186 - MPMX19_00936 0.36 -1.0 973,186 - MPMX19_00936 0.36 +0.2 973,186 - MPMX19_00936 0.36 -0.2 973,186 - MPMX19_00936 0.36 -0.6 973,186 - MPMX19_00936 0.36 +0.2 973,191 + MPMX19_00936 0.37 +0.7 973,191 + MPMX19_00936 0.37 +0.6 973,191 + MPMX19_00936 0.37 -0.8 973,191 + MPMX19_00936 0.37 +0.7 973,191 + MPMX19_00936 0.37 -0.2 973,191 + MPMX19_00936 0.37 -1.2 973,191 + MPMX19_00936 0.37 +1.4 973,192 - MPMX19_00936 0.37 -0.9 973,192 - MPMX19_00936 0.37 +0.1 973,192 - MPMX19_00936 0.37 -0.5 973,192 - MPMX19_00936 0.37 -1.2 973,192 - MPMX19_00936 0.37 -2.6 973,197 + MPMX19_00936 0.37 -0.7 973,197 + MPMX19_00936 0.37 +0.1 973,197 + MPMX19_00936 0.37 -1.5 973,198 - MPMX19_00936 0.37 -0.3 973,198 - MPMX19_00936 0.37 -1.2 973,198 - MPMX19_00936 0.37 -0.1 973,212 + MPMX19_00936 0.39 -0.4 973,212 + MPMX19_00936 0.39 +1.1 973,212 + MPMX19_00936 0.39 -1.1 973,212 + MPMX19_00936 0.39 -1.0 973,213 - MPMX19_00936 0.39 -1.1 973,213 - MPMX19_00936 0.39 -1.5 973,349 + MPMX19_00936 0.53 +0.1 973,349 + MPMX19_00936 0.53 -0.7 973,349 + MPMX19_00936 0.53 +0.9 973,349 + MPMX19_00936 0.53 -0.4 973,350 - MPMX19_00936 0.53 -1.3 973,350 - MPMX19_00936 0.53 -1.6 973,350 - MPMX19_00936 0.53 -0.0 973,350 - MPMX19_00936 0.53 -0.2 973,350 - MPMX19_00936 0.53 -0.1 973,350 - MPMX19_00936 0.53 -1.3 973,350 - MPMX19_00936 0.53 +0.5 973,350 - MPMX19_00936 0.53 -1.3 973,350 - MPMX19_00936 0.53 +1.1 973,350 - MPMX19_00936 0.53 -0.3 973,350 - MPMX19_00936 0.53 +0.6
Or see this region's nucleotide sequence