Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00932

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00931 and MPMX19_00932 are separated by 254 nucleotidesMPMX19_00932 and MPMX19_00933 overlap by 1 nucleotides MPMX19_00931: MPMX19_00931 - Cyclopropane-fatty-acyl-phospholipid synthase, at 968,596 to 969,864 _00931 MPMX19_00932: MPMX19_00932 - 50S ribosomal protein L9, at 970,119 to 970,682 _00932 MPMX19_00933: MPMX19_00933 - hypothetical protein, at 970,682 to 971,641 _00933 Position (kb) 970 971Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 969.185 kb on + strand, within MPMX19_00931at 969.185 kb on + strand, within MPMX19_00931at 969.311 kb on + strand, within MPMX19_00931at 969.311 kb on + strand, within MPMX19_00931at 969.311 kb on + strand, within MPMX19_00931at 969.312 kb on - strand, within MPMX19_00931at 969.312 kb on - strand, within MPMX19_00931at 969.443 kb on + strand, within MPMX19_00931at 969.443 kb on + strand, within MPMX19_00931at 969.443 kb on + strand, within MPMX19_00931at 969.443 kb on + strand, within MPMX19_00931at 969.443 kb on + strand, within MPMX19_00931at 969.455 kb on + strand, within MPMX19_00931at 969.455 kb on + strand, within MPMX19_00931at 969.456 kb on - strand, within MPMX19_00931at 969.456 kb on - strand, within MPMX19_00931at 969.456 kb on - strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.485 kb on + strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.486 kb on - strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.506 kb on + strand, within MPMX19_00931at 969.507 kb on - strand, within MPMX19_00931at 969.507 kb on - strand, within MPMX19_00931at 969.507 kb on - strand, within MPMX19_00931at 969.507 kb on - strand, within MPMX19_00931at 969.507 kb on - strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.548 kb on + strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.549 kb on - strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.647 kb on + strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.648 kb on - strand, within MPMX19_00931at 969.684 kb on + strand, within MPMX19_00931at 969.684 kb on + strand, within MPMX19_00931at 969.684 kb on + strand, within MPMX19_00931at 969.684 kb on + strand, within MPMX19_00931at 969.684 kb on + strand, within MPMX19_00931at 969.685 kb on - strand, within MPMX19_00931at 969.685 kb on - strand, within MPMX19_00931at 969.685 kb on - strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.686 kb on + strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.687 kb on - strand, within MPMX19_00931at 969.966 kb on + strandat 969.967 kb on - strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.978 kb on + strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 969.979 kb on - strandat 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.804 kb on - strand, within MPMX19_00933at 970.851 kb on - strand, within MPMX19_00933at 971.401 kb on - strand, within MPMX19_00933

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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969,185 + MPMX19_00931 0.46 +0.9
969,185 + MPMX19_00931 0.46 -1.0
969,311 + MPMX19_00931 0.56 -1.1
969,311 + MPMX19_00931 0.56 -1.1
969,311 + MPMX19_00931 0.56 -1.3
969,312 - MPMX19_00931 0.56 +0.1
969,312 - MPMX19_00931 0.56 +0.1
969,443 + MPMX19_00931 0.67 -0.0
969,443 + MPMX19_00931 0.67 +0.6
969,443 + MPMX19_00931 0.67 -0.8
969,443 + MPMX19_00931 0.67 -2.4
969,443 + MPMX19_00931 0.67 +0.7
969,455 + MPMX19_00931 0.68 -1.0
969,455 + MPMX19_00931 0.68 -1.5
969,456 - MPMX19_00931 0.68 -0.8
969,456 - MPMX19_00931 0.68 -0.2
969,456 - MPMX19_00931 0.68 -0.7
969,485 + MPMX19_00931 0.70 -0.9
969,485 + MPMX19_00931 0.70 +0.5
969,485 + MPMX19_00931 0.70 -0.6
969,485 + MPMX19_00931 0.70 +0.2
969,485 + MPMX19_00931 0.70 +1.1
969,485 + MPMX19_00931 0.70 +0.0
969,485 + MPMX19_00931 0.70 -0.5
969,485 + MPMX19_00931 0.70 -1.3
969,485 + MPMX19_00931 0.70 -0.6
969,486 - MPMX19_00931 0.70 -1.0
969,486 - MPMX19_00931 0.70 -0.1
969,486 - MPMX19_00931 0.70 -1.3
969,486 - MPMX19_00931 0.70 +0.2
969,486 - MPMX19_00931 0.70 +0.7
969,486 - MPMX19_00931 0.70 -0.8
969,486 - MPMX19_00931 0.70 -1.1
969,486 - MPMX19_00931 0.70 -0.5
969,486 - MPMX19_00931 0.70 -0.3
969,486 - MPMX19_00931 0.70 -1.9
969,486 - MPMX19_00931 0.70 +0.5
969,506 + MPMX19_00931 0.72 -1.0
969,506 + MPMX19_00931 0.72 -1.1
969,506 + MPMX19_00931 0.72 -0.8
969,506 + MPMX19_00931 0.72 -0.5
969,506 + MPMX19_00931 0.72 +0.1
969,506 + MPMX19_00931 0.72 -0.2
969,506 + MPMX19_00931 0.72 -0.4
969,506 + MPMX19_00931 0.72 -0.6
969,506 + MPMX19_00931 0.72 -1.5
969,506 + MPMX19_00931 0.72 -1.9
969,506 + MPMX19_00931 0.72 -0.8
969,507 - MPMX19_00931 0.72 -1.7
969,507 - MPMX19_00931 0.72 -1.1
969,507 - MPMX19_00931 0.72 +0.5
969,507 - MPMX19_00931 0.72 -2.8
969,507 - MPMX19_00931 0.72 -2.2
969,548 + MPMX19_00931 0.75 -0.4
969,548 + MPMX19_00931 0.75 -0.7
969,548 + MPMX19_00931 0.75 +0.7
969,548 + MPMX19_00931 0.75 -0.5
969,548 + MPMX19_00931 0.75 -0.3
969,548 + MPMX19_00931 0.75 -1.2
969,548 + MPMX19_00931 0.75 +0.2
969,548 + MPMX19_00931 0.75 -0.9
969,548 + MPMX19_00931 0.75 -0.4
969,548 + MPMX19_00931 0.75 +0.5
969,548 + MPMX19_00931 0.75 -0.5
969,548 + MPMX19_00931 0.75 -0.8
969,548 + MPMX19_00931 0.75 +0.4
969,548 + MPMX19_00931 0.75 +1.1
969,548 + MPMX19_00931 0.75 +0.1
969,548 + MPMX19_00931 0.75 -1.5
969,548 + MPMX19_00931 0.75 +1.0
969,549 - MPMX19_00931 0.75 +0.7
969,549 - MPMX19_00931 0.75 +0.0
969,549 - MPMX19_00931 0.75 -0.8
969,549 - MPMX19_00931 0.75 +0.8
969,549 - MPMX19_00931 0.75 +0.4
969,549 - MPMX19_00931 0.75 -0.5
969,549 - MPMX19_00931 0.75 +0.6
969,549 - MPMX19_00931 0.75 -1.4
969,549 - MPMX19_00931 0.75 -0.5
969,549 - MPMX19_00931 0.75 -2.1
969,549 - MPMX19_00931 0.75 -0.5
969,549 - MPMX19_00931 0.75 -0.2
969,549 - MPMX19_00931 0.75 -1.5
969,549 - MPMX19_00931 0.75 -0.2
969,549 - MPMX19_00931 0.75 -0.8
969,549 - MPMX19_00931 0.75 -1.8
969,549 - MPMX19_00931 0.75 +0.1
969,647 + MPMX19_00931 0.83 -0.5
969,647 + MPMX19_00931 0.83 -0.3
969,647 + MPMX19_00931 0.83 -1.0
969,647 + MPMX19_00931 0.83 +0.9
969,647 + MPMX19_00931 0.83 -0.4
969,647 + MPMX19_00931 0.83 -0.6
969,647 + MPMX19_00931 0.83 -1.4
969,647 + MPMX19_00931 0.83 -0.3
969,648 - MPMX19_00931 0.83 -0.8
969,648 - MPMX19_00931 0.83 -0.5
969,648 - MPMX19_00931 0.83 +0.5
969,648 - MPMX19_00931 0.83 -1.6
969,648 - MPMX19_00931 0.83 -0.5
969,648 - MPMX19_00931 0.83 -0.9
969,648 - MPMX19_00931 0.83 -0.8
969,648 - MPMX19_00931 0.83 -1.5
969,648 - MPMX19_00931 0.83 +0.6
969,684 + MPMX19_00931 0.86 -0.0
969,684 + MPMX19_00931 0.86 -0.6
969,684 + MPMX19_00931 0.86 +1.4
969,684 + MPMX19_00931 0.86 +0.6
969,684 + MPMX19_00931 0.86 -1.3
969,685 - MPMX19_00931 0.86 -0.1
969,685 - MPMX19_00931 0.86 -0.5
969,685 - MPMX19_00931 0.86 +1.2
969,686 + MPMX19_00931 0.86 -0.5
969,686 + MPMX19_00931 0.86 -1.9
969,686 + MPMX19_00931 0.86 -2.8
969,686 + MPMX19_00931 0.86 -1.1
969,686 + MPMX19_00931 0.86 -0.8
969,686 + MPMX19_00931 0.86 -0.4
969,686 + MPMX19_00931 0.86 -1.8
969,686 + MPMX19_00931 0.86 -1.3
969,686 + MPMX19_00931 0.86 -1.0
969,686 + MPMX19_00931 0.86 -1.2
969,686 + MPMX19_00931 0.86 +0.9
969,686 + MPMX19_00931 0.86 -1.5
969,686 + MPMX19_00931 0.86 +0.3
969,686 + MPMX19_00931 0.86 +0.8
969,686 + MPMX19_00931 0.86 -0.3
969,687 - MPMX19_00931 0.86 +0.5
969,687 - MPMX19_00931 0.86 -0.0
969,687 - MPMX19_00931 0.86 -0.4
969,687 - MPMX19_00931 0.86 -0.0
969,687 - MPMX19_00931 0.86 +1.7
969,687 - MPMX19_00931 0.86 +1.1
969,687 - MPMX19_00931 0.86 +0.4
969,687 - MPMX19_00931 0.86 -0.6
969,687 - MPMX19_00931 0.86 +0.3
969,687 - MPMX19_00931 0.86 -0.8
969,687 - MPMX19_00931 0.86 +0.4
969,687 - MPMX19_00931 0.86 +0.1
969,687 - MPMX19_00931 0.86 -1.1
969,687 - MPMX19_00931 0.86 +0.5
969,687 - MPMX19_00931 0.86 -1.8
969,687 - MPMX19_00931 0.86 -0.3
969,687 - MPMX19_00931 0.86 -0.6
969,687 - MPMX19_00931 0.86 +0.2
969,687 - MPMX19_00931 0.86 -0.8
969,687 - MPMX19_00931 0.86 -1.9
969,687 - MPMX19_00931 0.86 -1.7
969,966 + -0.7
969,967 - -1.1
969,978 + -1.4
969,978 + -0.4
969,978 + +0.7
969,978 + -0.1
969,978 + -0.4
969,978 + -0.2
969,978 + +0.9
969,978 + +0.4
969,978 + +0.6
969,978 + +0.0
969,979 - -0.9
969,979 - -1.1
969,979 - -2.2
969,979 - -1.0
969,979 - +2.5
969,979 - -1.1
969,979 - -1.5
969,979 - +0.6
969,979 - -0.7
970,804 - MPMX19_00933 0.13 -0.2
970,804 - MPMX19_00933 0.13 -2.9
970,804 - MPMX19_00933 0.13 -1.4
970,804 - MPMX19_00933 0.13 -0.5
970,804 - MPMX19_00933 0.13 -0.4
970,804 - MPMX19_00933 0.13 -0.2
970,804 - MPMX19_00933 0.13 -0.2
970,804 - MPMX19_00933 0.13 -0.5
970,804 - MPMX19_00933 0.13 -1.1
970,804 - MPMX19_00933 0.13 -0.3
970,851 - MPMX19_00933 0.18 -0.3
971,401 - MPMX19_00933 0.75 -0.2

Or see this region's nucleotide sequence