Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00922 and MPMX19_00923 are separated by 42 nucleotides MPMX19_00923 and MPMX19_00924 overlap by 1 nucleotides MPMX19_00924 and MPMX19_00925 are separated by 174 nucleotides
MPMX19_00922: MPMX19_00922 - Isocitrate dehydrogenase [NADP], at 961,525 to 962,970
_00922
MPMX19_00923: MPMX19_00923 - hypothetical protein, at 963,013 to 963,564
_00923
MPMX19_00924: MPMX19_00924 - hypothetical protein, at 963,564 to 964,364
_00924
MPMX19_00925: MPMX19_00925 - hypothetical protein, at 964,539 to 964,907
_00925
Position (kb) 963
964 Strain fitness (log2 ratio) -2
-1
0
1
2 at 962.991 kb on + strand at 962.991 kb on + strand at 962.991 kb on + strand at 962.991 kb on + strand at 962.991 kb on + strand at 962.992 kb on - strand at 962.992 kb on - strand at 963.106 kb on + strand, within MPMX19_00923 at 963.106 kb on + strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.107 kb on - strand, within MPMX19_00923 at 963.436 kb on + strand, within MPMX19_00923 at 963.437 kb on - strand, within MPMX19_00923 at 963.437 kb on - strand, within MPMX19_00923 at 963.782 kb on + strand, within MPMX19_00924 at 964.152 kb on + strand, within MPMX19_00924 at 964.369 kb on - strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.380 kb on + strand at 964.381 kb on - strand at 964.381 kb on - strand at 964.381 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 962,991 + -1.2 962,991 + -0.3 962,991 + +0.7 962,991 + +0.9 962,991 + +0.6 962,992 - -1.2 962,992 - -1.8 963,106 + MPMX19_00923 0.17 +0.7 963,106 + MPMX19_00923 0.17 -0.6 963,107 - MPMX19_00923 0.17 +0.9 963,107 - MPMX19_00923 0.17 +2.0 963,107 - MPMX19_00923 0.17 -1.9 963,107 - MPMX19_00923 0.17 -0.3 963,107 - MPMX19_00923 0.17 +0.1 963,107 - MPMX19_00923 0.17 -0.4 963,107 - MPMX19_00923 0.17 +0.1 963,436 + MPMX19_00923 0.77 +1.5 963,437 - MPMX19_00923 0.77 +1.2 963,437 - MPMX19_00923 0.77 -0.7 963,782 + MPMX19_00924 0.27 -0.8 964,152 + MPMX19_00924 0.73 +0.1 964,369 - -0.1 964,380 + +0.5 964,380 + +2.2 964,380 + -1.7 964,380 + +1.5 964,380 + +0.4 964,380 + -0.6 964,380 + -0.6 964,381 - -0.9 964,381 - +0.7 964,381 - -0.1
Or see this region's nucleotide sequence