Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00894 and MPMX19_00895 are separated by 243 nucleotides MPMX19_00895 and MPMX19_00896 are separated by 117 nucleotides MPMX19_00896 and MPMX19_00897 are separated by 22 nucleotides MPMX19_00897 and MPMX19_00898 are separated by 103 nucleotides
MPMX19_00894: MPMX19_00894 - Peptidyl-prolyl cis-trans isomerase D, at 928,812 to 930,692
_00894
MPMX19_00895: MPMX19_00895 - hypothetical protein, at 930,936 to 931,115
_00895
MPMX19_00896: MPMX19_00896 - hypothetical protein, at 931,233 to 931,571
_00896
MPMX19_00897: MPMX19_00897 - hypothetical protein, at 931,594 to 931,812
_00897
MPMX19_00898: MPMX19_00898 - hypothetical protein, at 931,916 to 932,338
_00898
Position (kb) 930
931
932 Strain fitness (log2 ratio) -2
-1
0
1
2 at 930.148 kb on + strand, within MPMX19_00894 at 930.244 kb on + strand, within MPMX19_00894 at 930.245 kb on - strand, within MPMX19_00894 at 930.594 kb on + strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.595 kb on - strand at 930.705 kb on + strand at 930.706 kb on - strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.745 kb on + strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.746 kb on - strand at 930.750 kb on - strand at 930.750 kb on - strand at 930.890 kb on - strand at 930.890 kb on - strand at 930.937 kb on + strand at 930.937 kb on + strand at 930.937 kb on + strand at 930.938 kb on - strand at 930.938 kb on - strand at 931.140 kb on + strand at 931.140 kb on + strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.141 kb on - strand at 931.178 kb on + strand at 931.178 kb on + strand at 931.178 kb on + strand at 931.179 kb on - strand at 931.179 kb on - strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.184 kb on + strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.185 kb on - strand at 931.487 kb on + strand, within MPMX19_00896 at 931.487 kb on + strand, within MPMX19_00896 at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.801 kb on + strand at 931.802 kb on - strand at 931.802 kb on - strand at 931.802 kb on - strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.812 kb on + strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.813 kb on - strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.815 kb on + strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.816 kb on - strand at 931.837 kb on + strand at 931.838 kb on - strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.873 kb on + strand at 931.874 kb on - strand at 931.874 kb on - strand at 931.874 kb on - strand at 931.876 kb on + strand at 931.876 kb on + strand at 931.879 kb on + strand at 931.879 kb on + strand at 931.880 kb on - strand at 931.880 kb on - strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.929 kb on + strand at 931.930 kb on - strand at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.030 kb on + strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.031 kb on - strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898 at 932.085 kb on + strand, within MPMX19_00898
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 930,148 + MPMX19_00894 0.71 -1.3 930,244 + MPMX19_00894 0.76 -1.2 930,245 - MPMX19_00894 0.76 -0.9 930,594 + -2.0 930,595 - -1.0 930,595 - -0.4 930,595 - +0.7 930,595 - -1.6 930,595 - +0.6 930,595 - -0.6 930,705 + -0.1 930,706 - +1.0 930,745 + +0.2 930,745 + -0.6 930,745 + -1.2 930,745 + +0.5 930,745 + -1.3 930,745 + -0.9 930,745 + -1.3 930,745 + -1.3 930,745 + -1.1 930,745 + +1.4 930,745 + -1.9 930,745 + +0.7 930,746 - +0.7 930,746 - +0.7 930,746 - -0.0 930,746 - -0.3 930,746 - +0.6 930,746 - -0.1 930,746 - +0.2 930,746 - -0.5 930,746 - +0.4 930,746 - +0.2 930,746 - +0.1 930,746 - +0.4 930,746 - -0.4 930,746 - -0.9 930,746 - -0.1 930,746 - +0.5 930,746 - -0.3 930,746 - -1.5 930,746 - -1.7 930,746 - -0.6 930,746 - -1.6 930,746 - +1.7 930,746 - +0.2 930,746 - -2.0 930,746 - -0.5 930,746 - -1.7 930,746 - -0.4 930,746 - -0.9 930,746 - -0.7 930,746 - +1.1 930,746 - -0.7 930,746 - -1.1 930,746 - +0.2 930,746 - -0.7 930,746 - -0.6 930,750 - +1.5 930,750 - -1.1 930,890 - +0.7 930,890 - +1.1 930,937 + +0.9 930,937 + -0.1 930,937 + +0.5 930,938 - -0.4 930,938 - -0.4 931,140 + -2.0 931,140 + -1.7 931,141 - -2.4 931,141 - -0.8 931,141 - -2.0 931,141 - -1.2 931,178 + -0.3 931,178 + -0.5 931,178 + +1.4 931,179 - +0.3 931,179 - +0.2 931,184 + -2.2 931,184 + +0.6 931,184 + +0.7 931,184 + -0.1 931,184 + -0.9 931,185 - +0.2 931,185 - +1.0 931,185 - -1.0 931,185 - -0.8 931,487 + MPMX19_00896 0.75 -0.9 931,487 + MPMX19_00896 0.75 +0.7 931,801 + +1.0 931,801 + -0.5 931,801 + +0.9 931,801 + -0.6 931,801 + +1.2 931,802 - +0.5 931,802 - -2.2 931,802 - -0.3 931,812 + -0.5 931,812 + +0.7 931,812 + -0.6 931,812 + +0.6 931,812 + -1.5 931,812 + -1.1 931,812 + -0.6 931,812 + -0.9 931,812 + -1.5 931,812 + -0.2 931,812 + +0.1 931,812 + +0.1 931,812 + -1.7 931,812 + +0.9 931,812 + -0.7 931,812 + -0.6 931,812 + +1.2 931,812 + +0.1 931,812 + +0.0 931,812 + +0.1 931,812 + -0.5 931,812 + +0.2 931,812 + -0.6 931,812 + -0.4 931,812 + -0.9 931,812 + -1.0 931,812 + +0.5 931,812 + +0.9 931,812 + -0.6 931,812 + -0.2 931,812 + -0.1 931,812 + -2.0 931,812 + -1.5 931,812 + +0.3 931,812 + -0.8 931,812 + +0.1 931,812 + +0.1 931,812 + +0.7 931,812 + -0.4 931,812 + -0.7 931,812 + +0.1 931,812 + -0.9 931,812 + -1.5 931,812 + +0.7 931,813 - -1.9 931,813 - -0.7 931,813 - +0.1 931,813 - +0.1 931,813 - +0.4 931,813 - -1.0 931,813 - +0.3 931,813 - +0.1 931,813 - +0.2 931,813 - -1.5 931,813 - +0.3 931,813 - -0.1 931,813 - +0.4 931,813 - -0.7 931,813 - -0.5 931,813 - -0.3 931,813 - +1.1 931,813 - -0.6 931,813 - +1.7 931,813 - +1.4 931,813 - -0.1 931,813 - +0.3 931,813 - +1.3 931,813 - +2.7 931,813 - +1.1 931,813 - +0.9 931,813 - +0.3 931,813 - +1.7 931,813 - -1.0 931,813 - +0.0 931,813 - -1.4 931,813 - -1.5 931,813 - +0.5 931,815 + +2.1 931,815 + -0.4 931,815 + +1.1 931,815 + -1.2 931,815 + +1.0 931,815 + +1.7 931,815 + -0.0 931,815 + -0.9 931,816 - -1.7 931,816 - +0.4 931,816 - -2.7 931,816 - -0.1 931,837 + -0.4 931,838 - +1.3 931,873 + -1.3 931,873 + -0.3 931,873 + +0.1 931,873 + -2.4 931,873 + +0.0 931,873 + +0.7 931,874 - +0.5 931,874 - -2.0 931,874 - +0.5 931,876 + -0.8 931,876 + +0.7 931,879 + -1.0 931,879 + -0.3 931,880 - -0.6 931,880 - +0.1 931,929 + -0.3 931,929 + +1.3 931,929 + -2.6 931,929 + +0.1 931,930 - +1.5 932,030 + MPMX19_00898 0.27 +0.7 932,030 + MPMX19_00898 0.27 +0.3 932,030 + MPMX19_00898 0.27 -1.9 932,030 + MPMX19_00898 0.27 -1.1 932,030 + MPMX19_00898 0.27 -0.1 932,030 + MPMX19_00898 0.27 -0.2 932,030 + MPMX19_00898 0.27 -1.2 932,030 + MPMX19_00898 0.27 -0.3 932,031 - MPMX19_00898 0.27 +0.2 932,031 - MPMX19_00898 0.27 -0.5 932,031 - MPMX19_00898 0.27 -1.7 932,031 - MPMX19_00898 0.27 -2.2 932,031 - MPMX19_00898 0.27 +0.1 932,031 - MPMX19_00898 0.27 +0.5 932,031 - MPMX19_00898 0.27 -0.0 932,085 + MPMX19_00898 0.40 -0.3 932,085 + MPMX19_00898 0.40 -0.3 932,085 + MPMX19_00898 0.40 -0.5
Or see this region's nucleotide sequence