Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00817 and MPMX19_00818 are separated by 5 nucleotides MPMX19_00818 and MPMX19_00819 are separated by 117 nucleotides MPMX19_00819 and MPMX19_00820 are separated by 70 nucleotides MPMX19_00820 and MPMX19_00821 are separated by 17 nucleotides MPMX19_00821 and MPMX19_00822 are separated by 76 nucleotides
MPMX19_00817: MPMX19_00817 - Penicillin-binding protein 1C, at 844,391 to 846,430
_00817
MPMX19_00818: MPMX19_00818 - hypothetical protein, at 846,436 to 846,708
_00818
MPMX19_00819: MPMX19_00819 - hypothetical protein, at 846,826 to 847,212
_00819
MPMX19_00820: MPMX19_00820 - Multicopper oxidase MmcO, at 847,283 to 848,896
_00820
MPMX19_00821: MPMX19_00821 - Protein SlyX, at 848,914 to 849,141
_00821
MPMX19_00822: MPMX19_00822 - Divalent metal cation transporter MntH, at 849,218 to 850,513
_00822
Position (kb) 847
848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 846.438 kb on - strand at 846.530 kb on + strand, within MPMX19_00818 at 846.530 kb on + strand, within MPMX19_00818 at 846.530 kb on + strand, within MPMX19_00818 at 846.530 kb on + strand, within MPMX19_00818 at 846.531 kb on - strand, within MPMX19_00818 at 846.531 kb on - strand, within MPMX19_00818 at 846.531 kb on - strand, within MPMX19_00818 at 846.531 kb on - strand, within MPMX19_00818 at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.682 kb on + strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.683 kb on - strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.684 kb on + strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.685 kb on - strand at 846.724 kb on + strand at 846.725 kb on - strand at 846.725 kb on - strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.738 kb on + strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.739 kb on - strand at 846.783 kb on + strand at 846.783 kb on + strand at 846.784 kb on - strand at 846.784 kb on - strand at 846.790 kb on + strand at 846.791 kb on - strand at 846.791 kb on - strand at 846.791 kb on - strand at 847.490 kb on - strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.592 kb on + strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 847.593 kb on - strand, within MPMX19_00820 at 848.044 kb on - strand, within MPMX19_00820 at 848.044 kb on - strand, within MPMX19_00820 at 848.044 kb on - strand, within MPMX19_00820 at 848.102 kb on + strand, within MPMX19_00820 at 848.102 kb on + strand, within MPMX19_00820 at 848.102 kb on + strand, within MPMX19_00820 at 848.102 kb on + strand, within MPMX19_00820 at 848.102 kb on + strand, within MPMX19_00820 at 848.111 kb on + strand, within MPMX19_00820 at 848.111 kb on + strand, within MPMX19_00820 at 848.111 kb on + strand, within MPMX19_00820 at 848.111 kb on + strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.112 kb on - strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.573 kb on + strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.574 kb on - strand, within MPMX19_00820 at 848.586 kb on + strand, within MPMX19_00820 at 848.586 kb on + strand, within MPMX19_00820 at 848.586 kb on + strand, within MPMX19_00820 at 848.587 kb on - strand, within MPMX19_00820 at 848.587 kb on - strand, within MPMX19_00820 at 848.722 kb on - strand, within MPMX19_00820 at 848.880 kb on - strand at 848.880 kb on - strand at 848.880 kb on - strand at 848.880 kb on - strand at 848.880 kb on - strand at 848.918 kb on + strand at 848.918 kb on + strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.919 kb on - strand at 848.960 kb on + strand, within MPMX19_00821 at 848.960 kb on + strand, within MPMX19_00821 at 848.960 kb on + strand, within MPMX19_00821 at 848.960 kb on + strand, within MPMX19_00821 at 848.960 kb on + strand, within MPMX19_00821 at 848.960 kb on + strand, within MPMX19_00821 at 848.961 kb on - strand, within MPMX19_00821 at 848.961 kb on - strand, within MPMX19_00821 at 849.071 kb on + strand, within MPMX19_00821 at 849.071 kb on + strand, within MPMX19_00821 at 849.072 kb on - strand, within MPMX19_00821 at 849.072 kb on - strand, within MPMX19_00821 at 849.072 kb on - strand, within MPMX19_00821 at 849.141 kb on + strand at 849.141 kb on + strand at 849.141 kb on + strand at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.894 kb on + strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822 at 849.895 kb on - strand, within MPMX19_00822
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 846,438 - -0.4 846,530 + MPMX19_00818 0.34 +0.7 846,530 + MPMX19_00818 0.34 -1.3 846,530 + MPMX19_00818 0.34 -1.0 846,530 + MPMX19_00818 0.34 -0.7 846,531 - MPMX19_00818 0.35 -0.6 846,531 - MPMX19_00818 0.35 -0.8 846,531 - MPMX19_00818 0.35 -1.0 846,531 - MPMX19_00818 0.35 -1.9 846,682 + -0.2 846,682 + +0.0 846,682 + -0.9 846,682 + -1.8 846,682 + -0.5 846,682 + +0.1 846,682 + +0.2 846,682 + +0.1 846,683 - -0.6 846,683 - -0.1 846,683 - +0.1 846,683 - -1.0 846,683 - -0.0 846,683 - +1.3 846,683 - +0.7 846,683 - -0.3 846,683 - -1.6 846,684 + -1.5 846,684 + -0.5 846,684 + -0.2 846,684 + -0.0 846,684 + +0.3 846,684 + -0.3 846,684 + -0.5 846,684 + -0.7 846,684 + +0.1 846,684 + +0.2 846,684 + -0.5 846,685 - -0.9 846,685 - -0.5 846,685 - -0.4 846,685 - +0.2 846,685 - -0.5 846,685 - +1.1 846,685 - -1.5 846,685 - -0.0 846,685 - -0.6 846,724 + +0.4 846,725 - -0.8 846,725 - +0.1 846,738 + -1.5 846,738 + +1.6 846,738 + +0.2 846,738 + -0.8 846,738 + +0.1 846,738 + -1.6 846,738 + +0.7 846,739 - -0.4 846,739 - -0.6 846,739 - -0.6 846,739 - -0.7 846,739 - -1.1 846,739 - -0.6 846,739 - +1.5 846,739 - -0.6 846,739 - +1.3 846,739 - -0.6 846,739 - -1.6 846,739 - -1.5 846,739 - +1.4 846,739 - -0.6 846,783 + +1.1 846,783 + +1.2 846,784 - +0.8 846,784 - -0.2 846,790 + +0.1 846,791 - +1.1 846,791 - +0.4 846,791 - -1.9 847,490 - MPMX19_00820 0.13 -1.5 847,592 + MPMX19_00820 0.19 -0.8 847,592 + MPMX19_00820 0.19 +0.7 847,592 + MPMX19_00820 0.19 -2.0 847,592 + MPMX19_00820 0.19 -1.1 847,592 + MPMX19_00820 0.19 +0.1 847,592 + MPMX19_00820 0.19 -0.9 847,593 - MPMX19_00820 0.19 -1.1 847,593 - MPMX19_00820 0.19 -0.9 847,593 - MPMX19_00820 0.19 -0.1 847,593 - MPMX19_00820 0.19 +0.4 847,593 - MPMX19_00820 0.19 +1.0 847,593 - MPMX19_00820 0.19 +0.8 847,593 - MPMX19_00820 0.19 -1.3 847,593 - MPMX19_00820 0.19 +0.5 847,593 - MPMX19_00820 0.19 +0.5 847,593 - MPMX19_00820 0.19 -1.1 847,593 - MPMX19_00820 0.19 -1.0 848,044 - MPMX19_00820 0.47 -0.7 848,044 - MPMX19_00820 0.47 -2.1 848,044 - MPMX19_00820 0.47 +0.1 848,102 + MPMX19_00820 0.51 -0.2 848,102 + MPMX19_00820 0.51 -0.2 848,102 + MPMX19_00820 0.51 -0.1 848,102 + MPMX19_00820 0.51 -0.1 848,102 + MPMX19_00820 0.51 -3.1 848,111 + MPMX19_00820 0.51 +1.4 848,111 + MPMX19_00820 0.51 -0.3 848,111 + MPMX19_00820 0.51 -0.9 848,111 + MPMX19_00820 0.51 +0.2 848,112 - MPMX19_00820 0.51 -0.0 848,112 - MPMX19_00820 0.51 +0.7 848,112 - MPMX19_00820 0.51 -0.5 848,112 - MPMX19_00820 0.51 -1.9 848,112 - MPMX19_00820 0.51 +0.5 848,112 - MPMX19_00820 0.51 -0.1 848,573 + MPMX19_00820 0.80 +0.1 848,573 + MPMX19_00820 0.80 +0.4 848,573 + MPMX19_00820 0.80 -0.6 848,573 + MPMX19_00820 0.80 -0.5 848,573 + MPMX19_00820 0.80 +0.3 848,573 + MPMX19_00820 0.80 +0.4 848,573 + MPMX19_00820 0.80 +0.8 848,573 + MPMX19_00820 0.80 +0.2 848,573 + MPMX19_00820 0.80 -0.1 848,573 + MPMX19_00820 0.80 -1.1 848,573 + MPMX19_00820 0.80 +1.9 848,574 - MPMX19_00820 0.80 -0.4 848,574 - MPMX19_00820 0.80 -1.0 848,574 - MPMX19_00820 0.80 +1.0 848,574 - MPMX19_00820 0.80 +1.7 848,574 - MPMX19_00820 0.80 -0.3 848,574 - MPMX19_00820 0.80 +0.2 848,574 - MPMX19_00820 0.80 -0.8 848,574 - MPMX19_00820 0.80 -1.2 848,574 - MPMX19_00820 0.80 +0.3 848,586 + MPMX19_00820 0.81 +1.0 848,586 + MPMX19_00820 0.81 -0.9 848,586 + MPMX19_00820 0.81 +2.1 848,587 - MPMX19_00820 0.81 -0.1 848,587 - MPMX19_00820 0.81 -1.2 848,722 - MPMX19_00820 0.89 -1.5 848,880 - -0.8 848,880 - -1.8 848,880 - -0.6 848,880 - +0.1 848,880 - -0.1 848,918 + -0.2 848,918 + -0.6 848,919 - +0.1 848,919 - +0.7 848,919 - -2.0 848,919 - -1.7 848,919 - -1.0 848,919 - +0.2 848,919 - -3.0 848,919 - +0.2 848,960 + MPMX19_00821 0.20 -0.9 848,960 + MPMX19_00821 0.20 -0.0 848,960 + MPMX19_00821 0.20 -0.3 848,960 + MPMX19_00821 0.20 -1.0 848,960 + MPMX19_00821 0.20 -0.7 848,960 + MPMX19_00821 0.20 -0.1 848,961 - MPMX19_00821 0.21 -0.9 848,961 - MPMX19_00821 0.21 -0.6 849,071 + MPMX19_00821 0.69 +0.9 849,071 + MPMX19_00821 0.69 -0.8 849,072 - MPMX19_00821 0.69 -1.0 849,072 - MPMX19_00821 0.69 -0.1 849,072 - MPMX19_00821 0.69 -2.5 849,141 + +0.9 849,141 + +0.6 849,141 + -1.1 849,894 + MPMX19_00822 0.52 -1.5 849,894 + MPMX19_00822 0.52 +0.9 849,894 + MPMX19_00822 0.52 +0.0 849,894 + MPMX19_00822 0.52 -0.3 849,894 + MPMX19_00822 0.52 -0.9 849,894 + MPMX19_00822 0.52 +2.7 849,894 + MPMX19_00822 0.52 +0.0 849,894 + MPMX19_00822 0.52 -0.6 849,894 + MPMX19_00822 0.52 -0.6 849,894 + MPMX19_00822 0.52 +0.5 849,894 + MPMX19_00822 0.52 +0.9 849,894 + MPMX19_00822 0.52 -0.9 849,894 + MPMX19_00822 0.52 -1.6 849,894 + MPMX19_00822 0.52 +0.5 849,894 + MPMX19_00822 0.52 +0.6 849,894 + MPMX19_00822 0.52 +1.3 849,894 + MPMX19_00822 0.52 -0.6 849,894 + MPMX19_00822 0.52 -0.9 849,894 + MPMX19_00822 0.52 +0.9 849,895 - MPMX19_00822 0.52 -0.9 849,895 - MPMX19_00822 0.52 +0.8 849,895 - MPMX19_00822 0.52 -0.1 849,895 - MPMX19_00822 0.52 -0.0 849,895 - MPMX19_00822 0.52 +0.3 849,895 - MPMX19_00822 0.52 +0.4 849,895 - MPMX19_00822 0.52 +0.5 849,895 - MPMX19_00822 0.52 +0.1 849,895 - MPMX19_00822 0.52 -0.7 849,895 - MPMX19_00822 0.52 +0.4 849,895 - MPMX19_00822 0.52 +0.7 849,895 - MPMX19_00822 0.52 +0.5 849,895 - MPMX19_00822 0.52 -1.4 849,895 - MPMX19_00822 0.52 -0.7 849,895 - MPMX19_00822 0.52 +0.3 849,895 - MPMX19_00822 0.52 -1.9 849,895 - MPMX19_00822 0.52 -0.2 849,895 - MPMX19_00822 0.52 +0.7 849,895 - MPMX19_00822 0.52 -0.4
Or see this region's nucleotide sequence