Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00734 and MPMX19_00735 overlap by 4 nucleotides MPMX19_00735 and MPMX19_00736 are separated by 78 nucleotides MPMX19_00736 and MPMX19_00737 are separated by 26 nucleotides MPMX19_00737 and MPMX19_00738 are separated by 132 nucleotides
MPMX19_00734: MPMX19_00734 - Riboflavin biosynthesis protein RibBA, at 755,554 to 756,693
_00734
MPMX19_00735: MPMX19_00735 - Riboflavin synthase, at 756,690 to 757,277
_00735
MPMX19_00736: MPMX19_00736 - Riboflavin biosynthesis protein RibD, at 757,356 to 758,498
_00736
MPMX19_00737: MPMX19_00737 - Outer membrane protein assembly factor BamE, at 758,525 to 759,019
_00737
MPMX19_00738: MPMX19_00738 - hypothetical protein, at 759,152 to 759,745
_00738
Position (kb) 757
758
759 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.671 kb on + strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 756.672 kb on - strand at 757.290 kb on - strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.357 kb on + strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 757.358 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.167 kb on - strand at 759.167 kb on - strand at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 756,671 + -0.5 756,671 + -0.1 756,671 + +0.7 756,671 + +0.5 756,671 + -1.9 756,671 + +0.5 756,671 + -0.4 756,671 + -0.1 756,671 + +1.2 756,671 + -0.7 756,671 + -1.9 756,671 + -0.5 756,671 + +0.7 756,671 + -0.1 756,671 + -0.0 756,672 - +0.4 756,672 - -0.7 756,672 - +1.4 756,672 - +0.0 756,672 - -1.1 756,672 - +0.0 756,672 - -1.9 756,672 - -0.6 756,672 - -0.5 756,672 - -1.6 756,672 - +0.9 756,672 - +1.1 756,672 - +0.9 757,290 - +0.2 757,357 + -2.1 757,357 + -0.6 757,357 + -2.2 757,357 + -0.3 757,357 + +1.5 757,357 + -0.6 757,357 + -0.3 757,357 + -1.3 757,357 + -1.3 757,357 + -0.0 757,358 - +0.1 757,358 - -2.0 757,358 - -0.2 757,358 - -1.1 757,358 - -0.3 759,032 - -0.8 759,032 - -2.3 759,032 - -3.0 759,032 - -0.6 759,032 - -0.5 759,032 - -0.5 759,032 - -1.3 759,032 - +0.0 759,166 + -0.3 759,166 + -1.6 759,167 - +0.4 759,167 - -1.2 759,299 + MPMX19_00738 0.25 -1.0 759,299 + MPMX19_00738 0.25 -0.7 759,299 + MPMX19_00738 0.25 -0.8 759,299 + MPMX19_00738 0.25 -0.5 759,299 + MPMX19_00738 0.25 -2.7 759,299 + MPMX19_00738 0.25 -0.4 759,299 + MPMX19_00738 0.25 +0.4 759,299 + MPMX19_00738 0.25 +0.3 759,299 + MPMX19_00738 0.25 -1.1 759,299 + MPMX19_00738 0.25 +1.3 759,299 + MPMX19_00738 0.25 -0.7 759,300 - MPMX19_00738 0.25 -0.1 759,300 - MPMX19_00738 0.25 -2.1 759,300 - MPMX19_00738 0.25 -0.2 759,300 - MPMX19_00738 0.25 +0.4 759,300 - MPMX19_00738 0.25 -0.6 759,300 - MPMX19_00738 0.25 -1.9 759,300 - MPMX19_00738 0.25 -1.3 759,425 + MPMX19_00738 0.46 -0.3 759,425 + MPMX19_00738 0.46 -1.3 759,425 + MPMX19_00738 0.46 -1.5 759,426 - MPMX19_00738 0.46 -2.0 759,426 - MPMX19_00738 0.46 -1.4
Or see this region's nucleotide sequence