Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00714 and MPMX19_00715 are separated by 126 nucleotides MPMX19_00715 and MPMX19_00716 are separated by 104 nucleotides
MPMX19_00714: MPMX19_00714 - Ferrous-iron efflux pump FieF, at 736,479 to 737,414
_00714
MPMX19_00715: MPMX19_00715 - hypothetical protein, at 737,541 to 739,052
_00715
MPMX19_00716: MPMX19_00716 - Hydrogenase maturation factor HypD, at 739,157 to 740,269
_00716
Position (kb) 737
738
739
740 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.548 kb on + strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.549 kb on - strand at 736.599 kb on + strand, within MPMX19_00714 at 736.599 kb on + strand, within MPMX19_00714 at 736.599 kb on + strand, within MPMX19_00714 at 736.599 kb on + strand, within MPMX19_00714 at 736.599 kb on + strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.600 kb on - strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.968 kb on + strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 736.969 kb on - strand, within MPMX19_00714 at 737.457 kb on + strand at 737.458 kb on - strand at 737.467 kb on + strand at 737.526 kb on + strand at 737.531 kb on + strand at 737.531 kb on + strand at 737.532 kb on - strand at 737.532 kb on - strand at 737.532 kb on - strand at 737.536 kb on + strand at 737.592 kb on + strand at 737.606 kb on + strand at 737.606 kb on + strand at 737.607 kb on - strand at 737.607 kb on - strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.609 kb on + strand at 737.610 kb on - strand at 737.610 kb on - strand at 737.610 kb on - strand at 737.610 kb on - strand at 737.610 kb on - strand at 737.610 kb on - strand at 738.651 kb on + strand, within MPMX19_00715 at 738.651 kb on + strand, within MPMX19_00715 at 738.651 kb on + strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.652 kb on - strand, within MPMX19_00715 at 738.696 kb on + strand, within MPMX19_00715 at 738.696 kb on + strand, within MPMX19_00715 at 738.696 kb on + strand, within MPMX19_00715 at 738.696 kb on + strand, within MPMX19_00715 at 738.697 kb on - strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.795 kb on + strand, within MPMX19_00715 at 738.796 kb on - strand, within MPMX19_00715 at 738.796 kb on - strand, within MPMX19_00715 at 738.796 kb on - strand, within MPMX19_00715 at 738.796 kb on - strand, within MPMX19_00715 at 738.942 kb on + strand at 738.942 kb on + strand at 738.942 kb on + strand at 738.943 kb on - strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.041 kb on + strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.042 kb on - strand at 739.058 kb on + strand at 739.058 kb on + strand at 739.058 kb on + strand at 739.102 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.112 kb on + strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.113 kb on - strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.163 kb on + strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.164 kb on - strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.244 kb on + strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.245 kb on - strand at 739.293 kb on - strand, within MPMX19_00716 at 739.293 kb on - strand, within MPMX19_00716 at 739.293 kb on - strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.427 kb on + strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.428 kb on - strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 736,548 + -0.3 736,548 + +0.9 736,548 + -0.4 736,548 + -0.1 736,548 + +0.5 736,548 + -0.5 736,548 + -0.4 736,548 + -1.3 736,548 + -1.9 736,548 + -1.7 736,548 + -0.9 736,548 + -0.6 736,548 + -0.7 736,548 + -0.4 736,548 + -0.9 736,548 + -2.2 736,548 + -0.6 736,548 + -0.5 736,548 + +0.4 736,548 + -0.5 736,548 + -0.8 736,548 + -1.7 736,548 + +0.2 736,548 + -0.5 736,548 + -1.1 736,549 - -1.6 736,549 - -0.3 736,549 - +0.1 736,549 - -2.4 736,549 - +0.1 736,549 - -1.8 736,549 - -1.0 736,549 - +0.5 736,549 - +0.3 736,549 - -0.7 736,549 - -0.7 736,549 - -0.3 736,549 - -0.8 736,549 - +0.3 736,549 - -0.0 736,549 - -0.2 736,549 - -0.3 736,549 - -0.5 736,549 - -1.3 736,549 - -0.7 736,549 - -0.6 736,549 - -1.6 736,549 - -0.4 736,549 - -1.7 736,549 - -0.3 736,549 - -1.4 736,599 + MPMX19_00714 0.13 +0.9 736,599 + MPMX19_00714 0.13 -1.3 736,599 + MPMX19_00714 0.13 -2.4 736,599 + MPMX19_00714 0.13 -1.4 736,599 + MPMX19_00714 0.13 -2.9 736,600 - MPMX19_00714 0.13 -1.4 736,600 - MPMX19_00714 0.13 -0.1 736,600 - MPMX19_00714 0.13 -2.6 736,600 - MPMX19_00714 0.13 +0.1 736,600 - MPMX19_00714 0.13 +1.7 736,600 - MPMX19_00714 0.13 +0.1 736,600 - MPMX19_00714 0.13 -0.5 736,600 - MPMX19_00714 0.13 -1.1 736,968 + MPMX19_00714 0.52 -1.4 736,968 + MPMX19_00714 0.52 -1.1 736,968 + MPMX19_00714 0.52 +0.5 736,968 + MPMX19_00714 0.52 +0.3 736,968 + MPMX19_00714 0.52 -1.7 736,968 + MPMX19_00714 0.52 +0.4 736,968 + MPMX19_00714 0.52 +0.2 736,968 + MPMX19_00714 0.52 +0.7 736,968 + MPMX19_00714 0.52 -2.1 736,968 + MPMX19_00714 0.52 -1.4 736,969 - MPMX19_00714 0.52 -0.7 736,969 - MPMX19_00714 0.52 -0.3 736,969 - MPMX19_00714 0.52 -1.2 736,969 - MPMX19_00714 0.52 -1.1 736,969 - MPMX19_00714 0.52 -0.2 736,969 - MPMX19_00714 0.52 -0.4 736,969 - MPMX19_00714 0.52 -0.5 736,969 - MPMX19_00714 0.52 -1.2 736,969 - MPMX19_00714 0.52 -2.3 736,969 - MPMX19_00714 0.52 -0.3 736,969 - MPMX19_00714 0.52 -1.5 737,457 + -0.2 737,458 - +0.9 737,467 + -1.0 737,526 + -1.0 737,531 + +0.4 737,531 + +0.7 737,532 - -0.7 737,532 - -0.1 737,532 - +0.3 737,536 + -0.5 737,592 + -0.1 737,606 + -0.2 737,606 + -0.5 737,607 - -1.4 737,607 - -0.6 737,609 + +0.7 737,609 + -0.5 737,609 + +0.6 737,609 + +1.4 737,609 + +0.5 737,609 + +0.3 737,609 + -2.1 737,609 + -0.7 737,610 - -0.1 737,610 - -1.3 737,610 - -2.2 737,610 - +1.1 737,610 - +0.4 737,610 - +1.2 738,651 + MPMX19_00715 0.73 +0.4 738,651 + MPMX19_00715 0.73 +1.4 738,651 + MPMX19_00715 0.73 -0.0 738,652 - MPMX19_00715 0.73 +0.2 738,652 - MPMX19_00715 0.73 +0.1 738,652 - MPMX19_00715 0.73 -0.5 738,652 - MPMX19_00715 0.73 -1.0 738,652 - MPMX19_00715 0.73 -1.3 738,652 - MPMX19_00715 0.73 +0.7 738,696 + MPMX19_00715 0.76 -0.1 738,696 + MPMX19_00715 0.76 +1.4 738,696 + MPMX19_00715 0.76 +0.8 738,696 + MPMX19_00715 0.76 -0.9 738,697 - MPMX19_00715 0.76 +0.9 738,795 + MPMX19_00715 0.83 +0.7 738,795 + MPMX19_00715 0.83 -0.8 738,795 + MPMX19_00715 0.83 -2.4 738,795 + MPMX19_00715 0.83 -0.0 738,795 + MPMX19_00715 0.83 -0.6 738,795 + MPMX19_00715 0.83 -0.1 738,796 - MPMX19_00715 0.83 +0.1 738,796 - MPMX19_00715 0.83 -0.7 738,796 - MPMX19_00715 0.83 -0.3 738,796 - MPMX19_00715 0.83 +0.1 738,942 + -1.4 738,942 + -1.0 738,942 + +1.4 738,943 - -1.9 739,041 + -0.1 739,041 + -0.3 739,041 + -0.6 739,041 + -0.5 739,041 + -0.6 739,041 + -0.1 739,041 + +0.3 739,041 + +0.6 739,041 + +1.6 739,041 + +2.0 739,041 + -1.2 739,042 - +1.7 739,042 - +0.3 739,042 - -1.1 739,042 - -0.4 739,042 - +0.6 739,042 - -0.1 739,042 - -0.1 739,042 - -1.0 739,042 - -0.3 739,042 - -1.9 739,042 - +0.1 739,042 - -0.2 739,042 - -1.0 739,042 - -1.2 739,042 - -1.2 739,042 - -2.2 739,042 - +0.5 739,058 + -0.6 739,058 + +0.2 739,058 + -0.6 739,102 + -0.2 739,112 + -0.9 739,112 + +0.3 739,112 + -1.7 739,112 + -1.4 739,112 + +0.5 739,112 + -0.8 739,112 + -1.8 739,112 + -0.2 739,112 + -1.1 739,112 + -0.6 739,112 + -0.5 739,112 + -0.7 739,112 + -1.3 739,112 + -0.4 739,112 + -1.1 739,113 - -1.2 739,113 - -0.3 739,113 - -0.6 739,113 - +0.2 739,113 - +0.4 739,113 - -0.8 739,113 - -0.3 739,113 - +0.5 739,113 - -0.2 739,113 - +0.1 739,113 - -0.4 739,113 - -0.4 739,163 + -0.4 739,163 + -1.3 739,163 + +1.4 739,163 + +0.2 739,163 + +0.7 739,163 + -2.0 739,163 + +0.2 739,163 + -1.4 739,163 + -0.1 739,163 + -0.2 739,164 - +0.9 739,164 - -0.9 739,164 - -1.3 739,164 - -1.3 739,164 - -0.7 739,164 - +0.3 739,164 - -0.6 739,164 - -1.6 739,244 + +0.5 739,244 + -0.5 739,244 + -1.5 739,244 + +0.4 739,244 + -0.3 739,244 + +0.3 739,244 + -0.2 739,244 + -1.4 739,244 + +0.4 739,244 + +0.4 739,244 + +0.6 739,245 - +0.1 739,245 - -1.0 739,245 - -1.0 739,245 - -1.4 739,245 - +0.3 739,245 - +0.3 739,245 - -0.6 739,245 - -1.3 739,245 - -0.4 739,245 - -1.0 739,245 - +0.1 739,245 - +1.4 739,293 - MPMX19_00716 0.12 +0.1 739,293 - MPMX19_00716 0.12 +0.1 739,293 - MPMX19_00716 0.12 -0.4 739,427 + MPMX19_00716 0.24 -0.3 739,427 + MPMX19_00716 0.24 +0.0 739,427 + MPMX19_00716 0.24 -0.6 739,427 + MPMX19_00716 0.24 -1.3 739,427 + MPMX19_00716 0.24 -0.5 739,427 + MPMX19_00716 0.24 -0.9 739,427 + MPMX19_00716 0.24 -0.2 739,427 + MPMX19_00716 0.24 -1.6 739,427 + MPMX19_00716 0.24 +0.7 739,428 - MPMX19_00716 0.24 -0.9 739,428 - MPMX19_00716 0.24 -0.1 739,428 - MPMX19_00716 0.24 +0.6 739,428 - MPMX19_00716 0.24 +1.4 739,428 - MPMX19_00716 0.24 +0.3 739,428 - MPMX19_00716 0.24 -0.9 739,428 - MPMX19_00716 0.24 -0.8 739,428 - MPMX19_00716 0.24 +0.3 739,428 - MPMX19_00716 0.24 +0.0 739,428 - MPMX19_00716 0.24 +0.7 739,428 - MPMX19_00716 0.24 -0.4 739,428 - MPMX19_00716 0.24 +0.7 739,428 - MPMX19_00716 0.24 -0.4 739,781 + MPMX19_00716 0.56 -0.6 739,781 + MPMX19_00716 0.56 +0.1 739,781 + MPMX19_00716 0.56 -0.8 739,781 + MPMX19_00716 0.56 -0.0 739,782 - MPMX19_00716 0.56 +3.3 739,782 - MPMX19_00716 0.56 +1.7 739,782 - MPMX19_00716 0.56 +0.1 740,045 + MPMX19_00716 0.80 -0.3 740,045 + MPMX19_00716 0.80 -0.9 740,045 + MPMX19_00716 0.80 -0.0 740,045 + MPMX19_00716 0.80 -0.5 740,045 + MPMX19_00716 0.80 -0.6 740,045 + MPMX19_00716 0.80 -0.6 740,045 + MPMX19_00716 0.80 +0.6 740,046 - MPMX19_00716 0.80 +0.1 740,046 - MPMX19_00716 0.80 +0.5 740,046 - MPMX19_00716 0.80 +0.6 740,046 - MPMX19_00716 0.80 +0.7 740,046 - MPMX19_00716 0.80 -1.3
Or see this region's nucleotide sequence