Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00677 and MPMX19_00678 are separated by 115 nucleotides MPMX19_00678 and MPMX19_00679 are separated by 101 nucleotides
MPMX19_00677: MPMX19_00677 - hypothetical protein, at 699,615 to 700,406
_00677
MPMX19_00678: MPMX19_00678 - Inositol-1-monophosphatase, at 700,522 to 701,319
_00678
MPMX19_00679: MPMX19_00679 - Elongation factor P, at 701,421 to 701,987
_00679
Position (kb)
700
701
702 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 699.525 kb on + strand at 699.525 kb on + strand at 699.525 kb on + strand at 699.526 kb on - strand at 699.526 kb on - strand at 699.552 kb on + strand at 699.552 kb on + strand at 699.553 kb on - strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.616 kb on + strand at 699.617 kb on - strand at 699.617 kb on - strand at 699.617 kb on - strand at 700.413 kb on - strand at 700.413 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 700.445 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 701.364 kb on - strand at 702.012 kb on - strand at 702.012 kb on - strand at 702.012 kb on - strand at 702.127 kb on + strand at 702.127 kb on + strand at 702.128 kb on - strand at 702.128 kb on - strand at 702.128 kb on - strand at 702.249 kb on + strand at 702.249 kb on + strand at 702.249 kb on + strand at 702.249 kb on + strand at 702.249 kb on + strand at 702.249 kb on + strand at 702.250 kb on - strand at 702.291 kb on + strand at 702.291 kb on + strand at 702.292 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 699,525 + +0.4 699,525 + -1.2 699,525 + -0.6 699,526 - -0.8 699,526 - +0.5 699,552 + -0.2 699,552 + -0.4 699,553 - +0.4 699,616 + -0.6 699,616 + -0.6 699,616 + -0.3 699,616 + +0.7 699,617 - +1.2 699,617 - +0.6 699,617 - +1.0 700,413 - +0.5 700,413 - -1.6 700,445 - -1.7 700,445 - -1.3 700,445 - +0.7 700,445 - -0.4 700,445 - -0.0 700,445 - +0.7 700,445 - +0.6 700,445 - -0.5 701,364 - +0.4 701,364 - -3.1 701,364 - -0.9 701,364 - -0.5 701,364 - +0.1 701,364 - -0.1 701,364 - -0.0 701,364 - -1.4 702,012 - -1.6 702,012 - +1.2 702,012 - +0.9 702,127 + -2.2 702,127 + -0.3 702,128 - -0.9 702,128 - -1.2 702,128 - -0.6 702,249 + -0.0 702,249 + -0.4 702,249 + +1.7 702,249 + -1.2 702,249 + +1.0 702,249 + +0.6 702,250 - -0.8 702,291 + -0.7 702,291 + +0.2 702,292 - -0.6
Or see this region's nucleotide sequence