Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00663 and MPMX19_00664 are separated by 44 nucleotides MPMX19_00664 and MPMX19_00665 are separated by 130 nucleotides MPMX19_00665 and MPMX19_00666 are separated by 10 nucleotides MPMX19_00666 and MPMX19_00667 are separated by 324 nucleotides
MPMX19_00663: MPMX19_00663 - hypothetical protein, at 686,891 to 687,526
_00663
MPMX19_00664: MPMX19_00664 - hypothetical protein, at 687,571 to 687,858
_00664
MPMX19_00665: MPMX19_00665 - hypothetical protein, at 687,989 to 688,423
_00665
MPMX19_00666: MPMX19_00666 - hypothetical protein, at 688,434 to 688,844
_00666
MPMX19_00667: MPMX19_00667 - Single-stranded-DNA-specific exonuclease RecJ, at 689,169 to 690,965
_00667
Position (kb) 688
689 Strain fitness (log2 ratio) -2
-1
0
1 at 687.437 kb on + strand, within MPMX19_00663 at 687.542 kb on + strand at 687.576 kb on - strand at 687.632 kb on + strand, within MPMX19_00664 at 687.633 kb on - strand, within MPMX19_00664 at 687.794 kb on + strand, within MPMX19_00664 at 687.794 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.827 kb on - strand, within MPMX19_00664 at 687.843 kb on + strand at 687.880 kb on - strand at 688.004 kb on + strand at 688.008 kb on + strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.050 kb on + strand, within MPMX19_00665 at 688.055 kb on + strand, within MPMX19_00665 at 688.055 kb on + strand, within MPMX19_00665 at 688.056 kb on - strand, within MPMX19_00665 at 688.077 kb on - strand, within MPMX19_00665 at 688.179 kb on - strand, within MPMX19_00665 at 688.237 kb on - strand, within MPMX19_00665 at 688.237 kb on - strand, within MPMX19_00665 at 688.426 kb on + strand at 688.427 kb on - strand at 688.427 kb on - strand at 688.445 kb on - strand at 688.538 kb on + strand, within MPMX19_00666 at 688.540 kb on + strand, within MPMX19_00666 at 688.541 kb on - strand, within MPMX19_00666 at 688.541 kb on - strand, within MPMX19_00666 at 688.541 kb on - strand, within MPMX19_00666 at 688.541 kb on - strand, within MPMX19_00666 at 688.579 kb on + strand, within MPMX19_00666 at 688.580 kb on - strand, within MPMX19_00666 at 688.659 kb on + strand, within MPMX19_00666 at 688.659 kb on + strand, within MPMX19_00666 at 688.660 kb on - strand, within MPMX19_00666 at 688.660 kb on - strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.762 kb on + strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.763 kb on - strand, within MPMX19_00666 at 688.766 kb on + strand, within MPMX19_00666 at 688.766 kb on + strand, within MPMX19_00666 at 688.766 kb on + strand, within MPMX19_00666 at 688.766 kb on + strand, within MPMX19_00666 at 688.766 kb on + strand, within MPMX19_00666 at 688.817 kb on + strand at 688.817 kb on + strand at 688.818 kb on - strand at 688.818 kb on - strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.819 kb on + strand at 688.820 kb on - strand at 688.820 kb on - strand at 688.820 kb on - strand at 688.820 kb on - strand at 688.838 kb on + strand at 688.838 kb on + strand at 688.839 kb on - strand at 688.839 kb on - strand at 688.848 kb on + strand at 688.898 kb on + strand at 688.898 kb on - strand at 688.909 kb on + strand at 688.909 kb on + strand at 688.911 kb on + strand at 688.920 kb on - strand at 688.944 kb on + strand at 688.944 kb on + strand at 688.945 kb on - strand at 688.946 kb on + strand at 688.948 kb on + strand at 688.949 kb on - strand at 689.014 kb on + strand at 689.014 kb on + strand at 689.014 kb on + strand at 689.014 kb on + strand at 689.014 kb on + strand at 689.015 kb on - strand at 689.015 kb on - strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.126 kb on + strand at 689.127 kb on - strand at 689.127 kb on - strand at 689.127 kb on - strand at 689.127 kb on - strand at 689.127 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 687,437 + MPMX19_00663 0.86 +0.9 687,542 + -1.1 687,576 - -1.9 687,632 + MPMX19_00664 0.21 -0.1 687,633 - MPMX19_00664 0.22 +0.4 687,794 + MPMX19_00664 0.77 +0.3 687,794 + MPMX19_00664 0.77 -1.1 687,798 + MPMX19_00664 0.79 -1.2 687,798 + MPMX19_00664 0.79 -2.2 687,798 + MPMX19_00664 0.79 -0.1 687,827 - MPMX19_00664 0.89 -2.1 687,843 + +0.1 687,880 - -0.3 688,004 + -1.5 688,008 + -1.6 688,011 - +0.1 688,011 - -0.9 688,011 - -0.5 688,011 - -1.5 688,050 + MPMX19_00665 0.14 +0.4 688,055 + MPMX19_00665 0.15 +0.0 688,055 + MPMX19_00665 0.15 -0.9 688,056 - MPMX19_00665 0.15 -1.2 688,077 - MPMX19_00665 0.20 -0.1 688,179 - MPMX19_00665 0.44 -0.7 688,237 - MPMX19_00665 0.57 +0.4 688,237 - MPMX19_00665 0.57 +0.6 688,426 + +0.1 688,427 - -1.6 688,427 - -1.3 688,445 - +0.5 688,538 + MPMX19_00666 0.25 -1.2 688,540 + MPMX19_00666 0.26 -0.7 688,541 - MPMX19_00666 0.26 -0.9 688,541 - MPMX19_00666 0.26 -0.6 688,541 - MPMX19_00666 0.26 +0.6 688,541 - MPMX19_00666 0.26 +0.5 688,579 + MPMX19_00666 0.35 -1.3 688,580 - MPMX19_00666 0.36 +0.1 688,659 + MPMX19_00666 0.55 -0.3 688,659 + MPMX19_00666 0.55 -0.3 688,660 - MPMX19_00666 0.55 -0.2 688,660 - MPMX19_00666 0.55 -0.6 688,762 + MPMX19_00666 0.80 -0.6 688,762 + MPMX19_00666 0.80 -0.0 688,762 + MPMX19_00666 0.80 -0.7 688,762 + MPMX19_00666 0.80 -1.3 688,762 + MPMX19_00666 0.80 +1.0 688,762 + MPMX19_00666 0.80 +0.1 688,762 + MPMX19_00666 0.80 +1.1 688,762 + MPMX19_00666 0.80 -0.0 688,762 + MPMX19_00666 0.80 -1.1 688,762 + MPMX19_00666 0.80 -1.5 688,762 + MPMX19_00666 0.80 -0.3 688,762 + MPMX19_00666 0.80 -1.1 688,762 + MPMX19_00666 0.80 -1.2 688,762 + MPMX19_00666 0.80 +0.4 688,762 + MPMX19_00666 0.80 -0.7 688,763 - MPMX19_00666 0.80 -1.7 688,763 - MPMX19_00666 0.80 +0.7 688,763 - MPMX19_00666 0.80 -0.3 688,763 - MPMX19_00666 0.80 +0.7 688,763 - MPMX19_00666 0.80 -1.3 688,763 - MPMX19_00666 0.80 -0.9 688,763 - MPMX19_00666 0.80 -0.2 688,763 - MPMX19_00666 0.80 +0.1 688,766 + MPMX19_00666 0.81 +0.0 688,766 + MPMX19_00666 0.81 -0.6 688,766 + MPMX19_00666 0.81 -0.6 688,766 + MPMX19_00666 0.81 -1.3 688,766 + MPMX19_00666 0.81 -0.3 688,817 + -1.5 688,817 + +0.1 688,818 - +1.3 688,818 - -0.9 688,819 + +0.1 688,819 + +0.0 688,819 + +0.1 688,819 + -0.3 688,819 + -1.9 688,819 + -0.6 688,819 + +0.0 688,820 - -1.3 688,820 - +0.7 688,820 - -1.3 688,820 - -0.3 688,838 + -0.9 688,838 + -0.3 688,839 - +0.3 688,839 - -1.5 688,848 + +0.5 688,898 + -0.5 688,898 - -1.0 688,909 + +0.7 688,909 + +1.7 688,911 + +0.5 688,920 - +0.1 688,944 + -0.3 688,944 + +0.2 688,945 - -0.9 688,946 + -0.8 688,948 + +0.6 688,949 - -1.1 689,014 + +1.0 689,014 + -1.9 689,014 + +0.1 689,014 + -2.0 689,014 + -0.4 689,015 - +0.9 689,015 - -1.6 689,126 + +0.9 689,126 + +0.9 689,126 + -1.5 689,126 + -0.5 689,126 + +0.6 689,126 + -0.5 689,126 + -0.2 689,127 - -0.1 689,127 - +1.0 689,127 - -0.9 689,127 - +0.3 689,127 - -1.9
Or see this region's nucleotide sequence