Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00578 and MPMX19_00579 are separated by 44 nucleotides MPMX19_00579 and MPMX19_00580 are separated by 56 nucleotides MPMX19_00580 and MPMX19_00581 are separated by 33 nucleotides MPMX19_00581 and MPMX19_00582 are separated by 2 nucleotides MPMX19_00582 and MPMX19_00583 are separated by 38 nucleotides
MPMX19_00578: MPMX19_00578 - Glutamate--cysteine ligase EgtA, at 592,216 to 593,580
_00578
MPMX19_00579: MPMX19_00579 - Ferredoxin-3, at 593,625 to 593,918
_00579
MPMX19_00580: MPMX19_00580 - hypothetical protein, at 593,975 to 594,175
_00580
MPMX19_00581: MPMX19_00581 - hypothetical protein, at 594,209 to 594,664
_00581
MPMX19_00582: MPMX19_00582 - hypothetical protein, at 594,667 to 595,065
_00582
MPMX19_00583: MPMX19_00583 - Nitrogenase molybdenum-iron protein beta chain, at 595,104 to 596,486
_00583
Position (kb) 593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 593.569 kb on + strand at 593.570 kb on - strand at 593.570 kb on - strand at 593.570 kb on - strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.575 kb on + strand at 593.576 kb on - strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.626 kb on + strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.627 kb on - strand at 593.950 kb on - strand at 593.964 kb on + strand at 593.964 kb on + strand at 593.964 kb on + strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.965 kb on - strand at 593.976 kb on + strand at 593.977 kb on - strand at 593.977 kb on - strand at 593.977 kb on - strand at 593.977 kb on - strand at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.036 kb on + strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.037 kb on - strand, within MPMX19_00580 at 594.232 kb on - strand at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.456 kb on + strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.457 kb on - strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.585 kb on + strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.586 kb on - strand, within MPMX19_00581 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.863 kb on + strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.864 kb on - strand, within MPMX19_00582 at 594.989 kb on + strand, within MPMX19_00582
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 593,569 + -0.1 593,570 - +0.3 593,570 - +1.1 593,570 - +0.9 593,575 + -0.6 593,575 + -0.1 593,575 + -0.7 593,575 + -0.3 593,576 - +1.1 593,626 + -0.3 593,626 + +1.3 593,626 + +0.3 593,626 + -0.6 593,626 + -1.1 593,626 + +0.0 593,626 + -2.9 593,626 + -0.7 593,627 - +0.0 593,627 - -0.1 593,627 - -1.6 593,627 - +0.5 593,627 - -0.5 593,950 - -0.4 593,964 + -1.6 593,964 + +1.0 593,964 + -1.7 593,965 - -0.7 593,965 - -1.0 593,965 - +0.5 593,965 - +0.1 593,976 + -1.3 593,977 - -0.9 593,977 - -1.0 593,977 - +0.0 593,977 - -1.2 594,036 + MPMX19_00580 0.30 +0.6 594,036 + MPMX19_00580 0.30 -0.3 594,036 + MPMX19_00580 0.30 -1.1 594,036 + MPMX19_00580 0.30 -1.2 594,036 + MPMX19_00580 0.30 -1.7 594,036 + MPMX19_00580 0.30 -0.9 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 -0.4 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 +1.7 594,037 - MPMX19_00580 0.31 -1.1 594,037 - MPMX19_00580 0.31 +0.2 594,037 - MPMX19_00580 0.31 -0.1 594,037 - MPMX19_00580 0.31 -1.6 594,037 - MPMX19_00580 0.31 -0.0 594,037 - MPMX19_00580 0.31 -1.0 594,037 - MPMX19_00580 0.31 -1.3 594,037 - MPMX19_00580 0.31 -1.4 594,037 - MPMX19_00580 0.31 -1.2 594,232 - -0.3 594,456 + MPMX19_00581 0.54 -0.6 594,456 + MPMX19_00581 0.54 -0.6 594,456 + MPMX19_00581 0.54 -0.8 594,456 + MPMX19_00581 0.54 +0.4 594,456 + MPMX19_00581 0.54 -0.2 594,456 + MPMX19_00581 0.54 -1.5 594,456 + MPMX19_00581 0.54 -0.9 594,456 + MPMX19_00581 0.54 -0.4 594,457 - MPMX19_00581 0.54 -0.7 594,457 - MPMX19_00581 0.54 +0.6 594,457 - MPMX19_00581 0.54 +0.4 594,457 - MPMX19_00581 0.54 +0.3 594,457 - MPMX19_00581 0.54 +0.1 594,457 - MPMX19_00581 0.54 -1.4 594,457 - MPMX19_00581 0.54 -0.6 594,457 - MPMX19_00581 0.54 +0.1 594,457 - MPMX19_00581 0.54 +0.4 594,457 - MPMX19_00581 0.54 -0.7 594,457 - MPMX19_00581 0.54 -1.6 594,585 + MPMX19_00581 0.82 +0.4 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 -0.5 594,585 + MPMX19_00581 0.82 -0.7 594,585 + MPMX19_00581 0.82 -0.3 594,585 + MPMX19_00581 0.82 -0.4 594,585 + MPMX19_00581 0.82 -0.1 594,585 + MPMX19_00581 0.82 +0.9 594,585 + MPMX19_00581 0.82 -0.6 594,585 + MPMX19_00581 0.82 -0.1 594,585 + MPMX19_00581 0.82 -2.3 594,585 + MPMX19_00581 0.82 +0.5 594,585 + MPMX19_00581 0.82 -0.7 594,585 + MPMX19_00581 0.82 +0.3 594,585 + MPMX19_00581 0.82 +0.2 594,585 + MPMX19_00581 0.82 -1.7 594,585 + MPMX19_00581 0.82 +0.7 594,585 + MPMX19_00581 0.82 +0.1 594,585 + MPMX19_00581 0.82 -0.9 594,585 + MPMX19_00581 0.82 -0.3 594,586 - MPMX19_00581 0.83 -0.4 594,586 - MPMX19_00581 0.83 +1.4 594,586 - MPMX19_00581 0.83 -0.2 594,586 - MPMX19_00581 0.83 +0.1 594,586 - MPMX19_00581 0.83 -0.5 594,586 - MPMX19_00581 0.83 -0.7 594,586 - MPMX19_00581 0.83 -0.4 594,586 - MPMX19_00581 0.83 -2.3 594,586 - MPMX19_00581 0.83 -1.0 594,586 - MPMX19_00581 0.83 +0.1 594,586 - MPMX19_00581 0.83 -0.2 594,586 - MPMX19_00581 0.83 -0.6 594,586 - MPMX19_00581 0.83 +1.1 594,586 - MPMX19_00581 0.83 -0.3 594,586 - MPMX19_00581 0.83 -1.3 594,586 - MPMX19_00581 0.83 +1.3 594,586 - MPMX19_00581 0.83 -0.3 594,586 - MPMX19_00581 0.83 -0.2 594,586 - MPMX19_00581 0.83 +0.3 594,586 - MPMX19_00581 0.83 +0.5 594,586 - MPMX19_00581 0.83 -0.0 594,586 - MPMX19_00581 0.83 +0.2 594,586 - MPMX19_00581 0.83 -0.1 594,863 + MPMX19_00582 0.49 -1.1 594,863 + MPMX19_00582 0.49 +0.3 594,863 + MPMX19_00582 0.49 +0.1 594,863 + MPMX19_00582 0.49 +0.7 594,863 + MPMX19_00582 0.49 -0.1 594,863 + MPMX19_00582 0.49 -0.4 594,863 + MPMX19_00582 0.49 +0.3 594,863 + MPMX19_00582 0.49 -1.1 594,863 + MPMX19_00582 0.49 +0.7 594,863 + MPMX19_00582 0.49 +0.9 594,863 + MPMX19_00582 0.49 -0.1 594,863 + MPMX19_00582 0.49 -1.4 594,863 + MPMX19_00582 0.49 +0.4 594,863 + MPMX19_00582 0.49 -0.2 594,863 + MPMX19_00582 0.49 -0.3 594,863 + MPMX19_00582 0.49 -0.3 594,863 + MPMX19_00582 0.49 +0.3 594,864 - MPMX19_00582 0.49 -0.6 594,864 - MPMX19_00582 0.49 +0.3 594,864 - MPMX19_00582 0.49 -0.7 594,864 - MPMX19_00582 0.49 -0.5 594,864 - MPMX19_00582 0.49 -0.0 594,864 - MPMX19_00582 0.49 -0.9 594,864 - MPMX19_00582 0.49 -1.3 594,864 - MPMX19_00582 0.49 +0.1 594,864 - MPMX19_00582 0.49 -0.9 594,864 - MPMX19_00582 0.49 -1.4 594,864 - MPMX19_00582 0.49 -1.9 594,864 - MPMX19_00582 0.49 +0.8 594,989 + MPMX19_00582 0.81 -0.9
Or see this region's nucleotide sequence