Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00575 and MPMX19_00576 are separated by 214 nucleotides MPMX19_00576 and MPMX19_00577 are separated by 179 nucleotides MPMX19_00577 and MPMX19_00578 are separated by 48 nucleotides
MPMX19_00575: MPMX19_00575 - 4-hydroxybenzoate octaprenyltransferase, at 589,657 to 590,604
_00575
MPMX19_00576: MPMX19_00576 - hypothetical protein, at 590,819 to 591,208
_00576
MPMX19_00577: MPMX19_00577 - Ribosomal RNA small subunit methyltransferase E, at 591,388 to 592,167
_00577
MPMX19_00578: MPMX19_00578 - Glutamate--cysteine ligase EgtA, at 592,216 to 593,580
_00578
Position (kb)
591
592
593 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 590.510 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.628 kb on - strand at 590.675 kb on - strand at 590.675 kb on - strand at 590.675 kb on - strand at 590.675 kb on - strand at 590.730 kb on + strand at 590.731 kb on - strand at 590.778 kb on + strand at 590.778 kb on + strand at 590.778 kb on + strand at 590.779 kb on - strand at 590.794 kb on + strand at 590.794 kb on + strand at 590.794 kb on + strand at 590.794 kb on + strand at 590.795 kb on - strand at 590.795 kb on - strand at 590.915 kb on + strand, within MPMX19_00576 at 590.916 kb on - strand, within MPMX19_00576 at 590.916 kb on - strand, within MPMX19_00576 at 590.999 kb on + strand, within MPMX19_00576 at 591.139 kb on + strand, within MPMX19_00576 at 591.139 kb on + strand, within MPMX19_00576 at 591.139 kb on + strand, within MPMX19_00576 at 591.140 kb on - strand, within MPMX19_00576 at 591.270 kb on + strand at 591.270 kb on + strand at 591.270 kb on + strand at 591.270 kb on + strand at 591.271 kb on - strand at 591.271 kb on - strand at 591.271 kb on - strand at 591.300 kb on + strand at 591.300 kb on + strand at 591.300 kb on + strand at 591.300 kb on + strand at 591.300 kb on + strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.301 kb on - strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.355 kb on + strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.356 kb on - strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.357 kb on + strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.358 kb on - strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.415 kb on + strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.416 kb on - strand at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.883 kb on + strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577 at 591.884 kb on - strand, within MPMX19_00577
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 590,510 - +1.1 590,628 - -0.4 590,628 - -0.3 590,628 - -0.9 590,628 - -0.6 590,628 - -1.3 590,628 - -0.7 590,628 - +0.0 590,628 - -0.3 590,628 - -0.9 590,628 - -1.9 590,628 - -0.4 590,628 - -0.7 590,675 - +0.5 590,675 - -1.0 590,675 - +1.3 590,675 - -0.0 590,730 + -1.3 590,731 - -2.9 590,778 + -0.2 590,778 + -0.9 590,778 + +1.7 590,779 - +1.7 590,794 + +0.6 590,794 + -0.7 590,794 + +1.4 590,794 + -2.9 590,795 - +0.7 590,795 - -0.7 590,915 + MPMX19_00576 0.25 -0.2 590,916 - MPMX19_00576 0.25 +0.4 590,916 - MPMX19_00576 0.25 -1.1 590,999 + MPMX19_00576 0.46 -0.9 591,139 + MPMX19_00576 0.82 +0.3 591,139 + MPMX19_00576 0.82 -0.6 591,139 + MPMX19_00576 0.82 +1.7 591,140 - MPMX19_00576 0.82 -0.7 591,270 + -0.2 591,270 + -0.1 591,270 + +0.7 591,270 + +1.0 591,271 - +0.1 591,271 - -0.2 591,271 - -0.7 591,300 + +1.7 591,300 + +0.9 591,300 + -0.9 591,300 + +0.1 591,300 + -0.4 591,301 - +0.3 591,301 - -1.2 591,301 - -0.6 591,301 - -0.1 591,301 - -2.1 591,301 - -0.7 591,301 - -0.7 591,355 + -1.0 591,355 + -0.1 591,355 + +0.6 591,355 + +0.1 591,355 + -1.1 591,355 + +0.1 591,355 + -0.9 591,355 + -0.7 591,355 + +0.3 591,355 + -0.4 591,355 + -2.9 591,355 + -1.9 591,355 + -0.1 591,355 + -0.7 591,355 + +0.1 591,355 + -0.7 591,355 + -0.7 591,356 - -1.3 591,356 - -0.4 591,356 - -0.9 591,356 - +0.5 591,356 - -0.3 591,356 - -0.7 591,356 - -0.6 591,356 - -0.4 591,356 - -1.6 591,356 - -0.7 591,356 - +0.1 591,356 - -1.5 591,356 - -2.9 591,357 + -0.4 591,357 + -1.1 591,357 + -0.9 591,357 + +0.1 591,357 + -0.3 591,357 + +0.4 591,357 + +1.1 591,357 + -1.1 591,357 + -2.4 591,357 + -1.1 591,357 + +0.7 591,357 + +1.1 591,357 + +0.7 591,357 + -1.2 591,358 - +0.0 591,358 - -0.5 591,358 - +0.9 591,358 - -0.7 591,358 - -1.4 591,358 - -1.1 591,358 - -0.3 591,358 - -0.9 591,358 - -2.4 591,358 - -1.4 591,358 - +1.7 591,358 - -1.6 591,358 - +0.4 591,358 - +0.2 591,415 + -0.4 591,415 + -0.4 591,415 + -0.2 591,415 + -1.2 591,415 + +0.3 591,415 + -2.2 591,415 + +0.2 591,415 + -0.3 591,415 + -1.3 591,415 + -1.4 591,415 + -0.4 591,416 - -0.3 591,416 - +0.3 591,416 - -1.0 591,416 - -0.1 591,416 - -0.5 591,416 - +0.1 591,416 - +1.3 591,416 - +0.9 591,416 - +0.4 591,416 - -2.6 591,416 - +2.1 591,416 - +0.3 591,883 + MPMX19_00577 0.63 +0.7 591,883 + MPMX19_00577 0.63 +1.1 591,883 + MPMX19_00577 0.63 -1.4 591,883 + MPMX19_00577 0.63 -0.6 591,883 + MPMX19_00577 0.63 -0.2 591,883 + MPMX19_00577 0.63 +0.1 591,883 + MPMX19_00577 0.63 +0.1 591,883 + MPMX19_00577 0.63 +0.3 591,883 + MPMX19_00577 0.63 +0.6 591,883 + MPMX19_00577 0.63 +0.7 591,884 - MPMX19_00577 0.64 +0.0 591,884 - MPMX19_00577 0.64 +0.6 591,884 - MPMX19_00577 0.64 -0.9 591,884 - MPMX19_00577 0.64 +0.7 591,884 - MPMX19_00577 0.64 +1.3 591,884 - MPMX19_00577 0.64 +0.1 591,884 - MPMX19_00577 0.64 +1.4 591,884 - MPMX19_00577 0.64 -0.0 591,884 - MPMX19_00577 0.64 -0.7 591,884 - MPMX19_00577 0.64 -0.3 591,884 - MPMX19_00577 0.64 +1.6 591,884 - MPMX19_00577 0.64 -1.6 591,884 - MPMX19_00577 0.64 +1.4 591,884 - MPMX19_00577 0.64 +0.1 591,884 - MPMX19_00577 0.64 +0.9
Or see this region's nucleotide sequence