Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00568 and MPMX19_00569 are separated by 379 nucleotides MPMX19_00569 and MPMX19_00570 are separated by 90 nucleotides
MPMX19_00568: MPMX19_00568 - Methyl-accepting chemotaxis protein, at 582,795 to 584,063
_00568
MPMX19_00569: MPMX19_00569 - hypothetical protein, at 584,443 to 585,489
_00569
MPMX19_00570: MPMX19_00570 - L-Ala-D/L-Glu epimerase, at 585,580 to 586,572
_00570
Position (kb) 584
585
586 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 584.176 kb on + strand at 584.213 kb on + strand at 584.213 kb on + strand at 584.214 kb on - strand at 584.214 kb on - strand at 584.214 kb on - strand at 584.214 kb on - strand at 584.214 kb on - strand at 584.254 kb on + strand at 584.255 kb on - strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.259 kb on + strand at 584.260 kb on - strand at 584.260 kb on - strand at 584.280 kb on + strand at 584.280 kb on + strand at 584.281 kb on - strand at 584.281 kb on - strand at 584.281 kb on - strand at 584.281 kb on - strand at 584.281 kb on - strand at 584.313 kb on + strand at 584.314 kb on - strand at 584.314 kb on - strand at 584.387 kb on - strand at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.812 kb on + strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.813 kb on - strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.935 kb on + strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.936 kb on - strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.944 kb on + strand, within MPMX19_00569 at 584.945 kb on - strand, within MPMX19_00569 at 584.945 kb on - strand, within MPMX19_00569 at 584.945 kb on - strand, within MPMX19_00569 at 584.945 kb on - strand, within MPMX19_00569 at 585.007 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.142 kb on + strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.143 kb on - strand, within MPMX19_00569 at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.388 kb on + strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.389 kb on - strand at 585.436 kb on + strand at 585.437 kb on - strand at 585.437 kb on - strand at 585.437 kb on - strand at 585.437 kb on - strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.445 kb on + strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.446 kb on - strand at 585.493 kb on + strand at 585.493 kb on + strand at 585.493 kb on + strand at 585.494 kb on - strand at 585.503 kb on + strand at 585.503 kb on + strand at 585.503 kb on + strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.504 kb on - strand at 585.525 kb on - strand at 585.542 kb on + strand at 585.542 kb on + strand at 585.542 kb on + strand at 585.727 kb on + strand, within MPMX19_00570 at 585.728 kb on - strand, within MPMX19_00570 at 585.736 kb on + strand, within MPMX19_00570 at 585.737 kb on - strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.955 kb on + strand, within MPMX19_00570 at 585.956 kb on - strand, within MPMX19_00570 at 585.956 kb on - strand, within MPMX19_00570 at 585.956 kb on - strand, within MPMX19_00570 at 585.956 kb on - strand, within MPMX19_00570 at 585.956 kb on - strand, within MPMX19_00570 at 586.306 kb on + strand, within MPMX19_00570 at 586.306 kb on + strand, within MPMX19_00570 at 586.307 kb on - strand, within MPMX19_00570 at 586.307 kb on - strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.468 kb on + strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570 at 586.469 kb on - strand, within MPMX19_00570
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 584,176 + -2.1 584,213 + +0.4 584,213 + +0.4 584,214 - -0.7 584,214 - +0.0 584,214 - -0.9 584,214 - -0.6 584,214 - -3.2 584,254 + -0.0 584,255 - -1.3 584,259 + -0.1 584,259 + -0.1 584,259 + -1.7 584,259 + -0.7 584,259 + +0.7 584,259 + -0.4 584,259 + -0.7 584,259 + -1.2 584,260 - -1.6 584,260 - -1.9 584,280 + +0.1 584,280 + +0.2 584,281 - +0.3 584,281 - -0.3 584,281 - +0.4 584,281 - -1.6 584,281 - -0.7 584,313 + -0.1 584,314 - -1.1 584,314 - +0.5 584,387 - -1.7 584,812 + MPMX19_00569 0.35 +0.9 584,812 + MPMX19_00569 0.35 -0.4 584,812 + MPMX19_00569 0.35 +2.2 584,812 + MPMX19_00569 0.35 -1.0 584,812 + MPMX19_00569 0.35 +0.5 584,812 + MPMX19_00569 0.35 +0.2 584,812 + MPMX19_00569 0.35 -0.0 584,812 + MPMX19_00569 0.35 +0.6 584,813 - MPMX19_00569 0.35 +0.9 584,813 - MPMX19_00569 0.35 -0.2 584,813 - MPMX19_00569 0.35 -0.1 584,813 - MPMX19_00569 0.35 +0.2 584,813 - MPMX19_00569 0.35 -0.1 584,813 - MPMX19_00569 0.35 -0.9 584,813 - MPMX19_00569 0.35 +0.1 584,813 - MPMX19_00569 0.35 +1.4 584,813 - MPMX19_00569 0.35 -1.3 584,813 - MPMX19_00569 0.35 -1.6 584,813 - MPMX19_00569 0.35 +0.7 584,813 - MPMX19_00569 0.35 -2.2 584,813 - MPMX19_00569 0.35 -0.6 584,813 - MPMX19_00569 0.35 -1.5 584,813 - MPMX19_00569 0.35 -1.1 584,813 - MPMX19_00569 0.35 -2.3 584,935 + MPMX19_00569 0.47 -0.4 584,935 + MPMX19_00569 0.47 +0.7 584,935 + MPMX19_00569 0.47 -0.9 584,935 + MPMX19_00569 0.47 -0.1 584,935 + MPMX19_00569 0.47 -1.4 584,935 + MPMX19_00569 0.47 -0.9 584,935 + MPMX19_00569 0.47 +0.0 584,935 + MPMX19_00569 0.47 -0.9 584,935 + MPMX19_00569 0.47 -0.3 584,935 + MPMX19_00569 0.47 +0.1 584,935 + MPMX19_00569 0.47 -1.3 584,935 + MPMX19_00569 0.47 -0.4 584,935 + MPMX19_00569 0.47 +0.4 584,936 - MPMX19_00569 0.47 +0.1 584,936 - MPMX19_00569 0.47 -1.9 584,936 - MPMX19_00569 0.47 +0.3 584,936 - MPMX19_00569 0.47 +0.3 584,936 - MPMX19_00569 0.47 +0.1 584,936 - MPMX19_00569 0.47 +0.7 584,936 - MPMX19_00569 0.47 +0.7 584,936 - MPMX19_00569 0.47 -0.0 584,936 - MPMX19_00569 0.47 +0.1 584,944 + MPMX19_00569 0.48 -1.0 584,944 + MPMX19_00569 0.48 -1.7 584,944 + MPMX19_00569 0.48 -0.0 584,944 + MPMX19_00569 0.48 +0.7 584,944 + MPMX19_00569 0.48 +0.0 584,944 + MPMX19_00569 0.48 +0.4 584,945 - MPMX19_00569 0.48 -1.1 584,945 - MPMX19_00569 0.48 -1.4 584,945 - MPMX19_00569 0.48 +0.1 584,945 - MPMX19_00569 0.48 -2.3 585,007 + MPMX19_00569 0.54 -1.8 585,142 + MPMX19_00569 0.67 -2.4 585,142 + MPMX19_00569 0.67 +0.5 585,142 + MPMX19_00569 0.67 +0.7 585,142 + MPMX19_00569 0.67 -0.0 585,142 + MPMX19_00569 0.67 +0.4 585,142 + MPMX19_00569 0.67 -0.4 585,142 + MPMX19_00569 0.67 -0.1 585,142 + MPMX19_00569 0.67 -0.7 585,142 + MPMX19_00569 0.67 -0.3 585,142 + MPMX19_00569 0.67 -1.9 585,142 + MPMX19_00569 0.67 +1.5 585,143 - MPMX19_00569 0.67 -0.3 585,143 - MPMX19_00569 0.67 -1.6 585,143 - MPMX19_00569 0.67 -1.8 585,143 - MPMX19_00569 0.67 -1.3 585,143 - MPMX19_00569 0.67 -0.3 585,143 - MPMX19_00569 0.67 -0.5 585,143 - MPMX19_00569 0.67 +0.1 585,143 - MPMX19_00569 0.67 +0.0 585,143 - MPMX19_00569 0.67 -0.0 585,143 - MPMX19_00569 0.67 -2.4 585,143 - MPMX19_00569 0.67 +0.1 585,143 - MPMX19_00569 0.67 +0.2 585,143 - MPMX19_00569 0.67 -1.9 585,143 - MPMX19_00569 0.67 +0.4 585,143 - MPMX19_00569 0.67 -1.1 585,143 - MPMX19_00569 0.67 -1.7 585,143 - MPMX19_00569 0.67 +0.1 585,388 + +0.1 585,388 + -0.8 585,388 + -0.2 585,388 + -0.4 585,388 + +1.3 585,388 + -1.1 585,388 + -0.5 585,388 + -0.4 585,388 + -0.6 585,388 + +1.0 585,388 + +0.9 585,388 + -0.0 585,388 + +0.6 585,388 + -0.7 585,388 + +0.2 585,389 - -0.3 585,389 - -1.5 585,389 - -0.1 585,389 - +0.7 585,389 - -0.5 585,389 - +0.6 585,389 - -1.1 585,389 - -2.4 585,389 - -2.2 585,389 - -1.0 585,389 - -0.2 585,389 - -0.7 585,389 - -1.7 585,389 - -0.5 585,389 - -2.0 585,389 - -2.3 585,389 - +0.1 585,389 - -0.4 585,389 - -1.7 585,389 - -0.9 585,389 - -0.1 585,389 - -0.9 585,389 - -0.3 585,389 - +0.2 585,389 - +0.0 585,389 - +0.2 585,389 - -0.0 585,389 - -0.2 585,389 - -1.0 585,389 - +0.4 585,389 - -0.5 585,436 + +1.4 585,437 - -0.5 585,437 - -0.5 585,437 - -0.2 585,437 - -0.9 585,445 + +0.3 585,445 + +0.1 585,445 + -0.0 585,445 + +0.9 585,445 + -1.9 585,445 + -0.0 585,445 + -0.1 585,445 + -0.5 585,445 + -0.6 585,445 + -0.9 585,445 + -0.4 585,445 + -0.7 585,445 + +1.0 585,445 + +0.1 585,445 + -0.6 585,445 + +0.7 585,445 + +0.1 585,445 + -1.4 585,445 + +0.1 585,445 + +0.8 585,445 + -0.4 585,445 + -1.2 585,445 + +0.5 585,446 - -0.8 585,446 - -0.1 585,446 - -2.5 585,446 - +0.2 585,446 - -1.6 585,446 - -0.9 585,446 - -0.5 585,446 - -0.9 585,446 - -1.1 585,446 - +0.6 585,446 - +0.1 585,446 - -0.5 585,446 - -0.5 585,446 - +1.7 585,446 - -1.3 585,446 - -0.6 585,446 - -0.0 585,446 - -0.5 585,446 - +0.9 585,446 - -0.9 585,446 - +1.3 585,446 - +0.7 585,446 - -0.6 585,446 - -0.9 585,446 - -0.3 585,446 - -0.1 585,493 + -2.1 585,493 + +0.3 585,493 + -0.3 585,494 - -1.7 585,503 + -0.5 585,503 + +0.3 585,503 + -0.3 585,504 - -1.4 585,504 - -0.3 585,504 - -0.4 585,504 - -1.6 585,504 - +0.2 585,504 - +0.1 585,504 - +0.0 585,504 - -1.4 585,525 - -2.2 585,542 + -1.3 585,542 + +0.4 585,542 + -1.0 585,727 + MPMX19_00570 0.15 -0.3 585,728 - MPMX19_00570 0.15 -0.8 585,736 + MPMX19_00570 0.16 -0.6 585,737 - MPMX19_00570 0.16 -1.4 585,955 + MPMX19_00570 0.38 -1.7 585,955 + MPMX19_00570 0.38 -1.3 585,955 + MPMX19_00570 0.38 -0.3 585,955 + MPMX19_00570 0.38 +0.3 585,955 + MPMX19_00570 0.38 -0.4 585,955 + MPMX19_00570 0.38 -1.3 585,955 + MPMX19_00570 0.38 -0.3 585,955 + MPMX19_00570 0.38 -0.9 585,955 + MPMX19_00570 0.38 -0.9 585,956 - MPMX19_00570 0.38 -0.5 585,956 - MPMX19_00570 0.38 +0.8 585,956 - MPMX19_00570 0.38 -0.9 585,956 - MPMX19_00570 0.38 -1.4 585,956 - MPMX19_00570 0.38 +0.6 586,306 + MPMX19_00570 0.73 -0.7 586,306 + MPMX19_00570 0.73 +0.5 586,307 - MPMX19_00570 0.73 -0.1 586,307 - MPMX19_00570 0.73 -1.7 586,468 + MPMX19_00570 0.89 -0.2 586,468 + MPMX19_00570 0.89 -0.6 586,468 + MPMX19_00570 0.89 -0.3 586,468 + MPMX19_00570 0.89 +0.1 586,468 + MPMX19_00570 0.89 -0.5 586,468 + MPMX19_00570 0.89 +0.3 586,468 + MPMX19_00570 0.89 -0.1 586,469 - MPMX19_00570 0.90 +0.1 586,469 - MPMX19_00570 0.90 -1.4 586,469 - MPMX19_00570 0.90 -0.7 586,469 - MPMX19_00570 0.90 -0.4 586,469 - MPMX19_00570 0.90 -1.6 586,469 - MPMX19_00570 0.90 +0.5 586,469 - MPMX19_00570 0.90 -0.4 586,469 - MPMX19_00570 0.90 -0.5 586,469 - MPMX19_00570 0.90 -0.9 586,469 - MPMX19_00570 0.90 -1.2
Or see this region's nucleotide sequence