Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00312 and MPMX19_00313 are separated by 47 nucleotides MPMX19_00313 and MPMX19_00314 are separated by 22 nucleotides
MPMX19_00312: MPMX19_00312 - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 315,920 to 316,945
_00312
MPMX19_00313: MPMX19_00313 - hypothetical protein, at 316,993 to 317,562
_00313
MPMX19_00314: MPMX19_00314 - Succinyl-diaminopimelate desuccinylase, at 317,585 to 318,733
_00314
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2 at 316.944 kb on - strand at 316.944 kb on - strand at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.111 kb on + strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.112 kb on - strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.204 kb on + strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.205 kb on - strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.237 kb on + strand, within MPMX19_00313 at 317.238 kb on - strand, within MPMX19_00313 at 317.238 kb on - strand, within MPMX19_00313 at 317.238 kb on - strand, within MPMX19_00313 at 317.238 kb on - strand, within MPMX19_00313 at 317.258 kb on + strand, within MPMX19_00313 at 317.259 kb on - strand, within MPMX19_00313 at 317.287 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.330 kb on + strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.331 kb on - strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.414 kb on + strand, within MPMX19_00313 at 317.415 kb on - strand, within MPMX19_00313 at 317.415 kb on - strand, within MPMX19_00313 at 317.415 kb on - strand, within MPMX19_00313 at 317.415 kb on - strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.441 kb on + strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313 at 317.442 kb on - strand, within MPMX19_00313
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 316,944 - +0.2 316,944 - -0.2 317,111 + MPMX19_00313 0.21 +0.2 317,111 + MPMX19_00313 0.21 -0.1 317,111 + MPMX19_00313 0.21 +0.3 317,111 + MPMX19_00313 0.21 -1.2 317,111 + MPMX19_00313 0.21 -0.2 317,111 + MPMX19_00313 0.21 -2.2 317,111 + MPMX19_00313 0.21 +1.3 317,111 + MPMX19_00313 0.21 -0.0 317,112 - MPMX19_00313 0.21 +0.8 317,112 - MPMX19_00313 0.21 -0.7 317,112 - MPMX19_00313 0.21 -0.3 317,112 - MPMX19_00313 0.21 -0.1 317,112 - MPMX19_00313 0.21 +0.2 317,112 - MPMX19_00313 0.21 -0.8 317,112 - MPMX19_00313 0.21 -0.5 317,112 - MPMX19_00313 0.21 -1.2 317,112 - MPMX19_00313 0.21 -0.8 317,204 + MPMX19_00313 0.37 -1.8 317,204 + MPMX19_00313 0.37 +1.4 317,204 + MPMX19_00313 0.37 +0.4 317,204 + MPMX19_00313 0.37 -1.4 317,204 + MPMX19_00313 0.37 -2.0 317,204 + MPMX19_00313 0.37 -0.1 317,204 + MPMX19_00313 0.37 -0.2 317,204 + MPMX19_00313 0.37 +0.8 317,204 + MPMX19_00313 0.37 -0.2 317,204 + MPMX19_00313 0.37 -0.2 317,204 + MPMX19_00313 0.37 -1.1 317,204 + MPMX19_00313 0.37 -1.1 317,204 + MPMX19_00313 0.37 -1.3 317,204 + MPMX19_00313 0.37 +0.5 317,204 + MPMX19_00313 0.37 +0.1 317,204 + MPMX19_00313 0.37 +1.0 317,204 + MPMX19_00313 0.37 -0.6 317,204 + MPMX19_00313 0.37 +0.4 317,204 + MPMX19_00313 0.37 -0.7 317,204 + MPMX19_00313 0.37 +0.4 317,205 - MPMX19_00313 0.37 +0.4 317,205 - MPMX19_00313 0.37 -1.9 317,205 - MPMX19_00313 0.37 +0.2 317,205 - MPMX19_00313 0.37 -0.6 317,205 - MPMX19_00313 0.37 -0.8 317,205 - MPMX19_00313 0.37 +0.6 317,205 - MPMX19_00313 0.37 -0.2 317,205 - MPMX19_00313 0.37 -0.7 317,205 - MPMX19_00313 0.37 -0.1 317,205 - MPMX19_00313 0.37 +0.5 317,205 - MPMX19_00313 0.37 +2.1 317,205 - MPMX19_00313 0.37 -1.0 317,205 - MPMX19_00313 0.37 +0.4 317,205 - MPMX19_00313 0.37 -0.6 317,205 - MPMX19_00313 0.37 -0.1 317,205 - MPMX19_00313 0.37 -1.1 317,205 - MPMX19_00313 0.37 +0.2 317,205 - MPMX19_00313 0.37 +0.2 317,205 - MPMX19_00313 0.37 -0.8 317,237 + MPMX19_00313 0.43 +0.0 317,237 + MPMX19_00313 0.43 -0.1 317,237 + MPMX19_00313 0.43 -1.9 317,237 + MPMX19_00313 0.43 +0.4 317,237 + MPMX19_00313 0.43 +0.4 317,237 + MPMX19_00313 0.43 +0.6 317,237 + MPMX19_00313 0.43 -0.1 317,237 + MPMX19_00313 0.43 -2.4 317,237 + MPMX19_00313 0.43 -1.6 317,238 - MPMX19_00313 0.43 +0.8 317,238 - MPMX19_00313 0.43 -0.2 317,238 - MPMX19_00313 0.43 -0.7 317,238 - MPMX19_00313 0.43 -0.1 317,258 + MPMX19_00313 0.46 -1.2 317,259 - MPMX19_00313 0.47 -1.0 317,287 + MPMX19_00313 0.52 +0.8 317,330 + MPMX19_00313 0.59 -1.2 317,330 + MPMX19_00313 0.59 +1.8 317,330 + MPMX19_00313 0.59 +0.5 317,330 + MPMX19_00313 0.59 +1.1 317,330 + MPMX19_00313 0.59 +0.6 317,330 + MPMX19_00313 0.59 +1.2 317,331 - MPMX19_00313 0.59 +0.5 317,331 - MPMX19_00313 0.59 -0.9 317,331 - MPMX19_00313 0.59 -1.7 317,331 - MPMX19_00313 0.59 -0.2 317,331 - MPMX19_00313 0.59 +0.5 317,331 - MPMX19_00313 0.59 +0.1 317,331 - MPMX19_00313 0.59 -0.6 317,331 - MPMX19_00313 0.59 -0.3 317,414 + MPMX19_00313 0.74 -0.8 317,414 + MPMX19_00313 0.74 -0.1 317,414 + MPMX19_00313 0.74 -1.4 317,414 + MPMX19_00313 0.74 -0.8 317,414 + MPMX19_00313 0.74 +0.3 317,414 + MPMX19_00313 0.74 -0.2 317,414 + MPMX19_00313 0.74 -0.5 317,415 - MPMX19_00313 0.74 +0.8 317,415 - MPMX19_00313 0.74 -0.2 317,415 - MPMX19_00313 0.74 -0.7 317,415 - MPMX19_00313 0.74 -0.4 317,441 + MPMX19_00313 0.79 -0.2 317,441 + MPMX19_00313 0.79 +0.8 317,441 + MPMX19_00313 0.79 -0.5 317,441 + MPMX19_00313 0.79 -1.8 317,441 + MPMX19_00313 0.79 +1.8 317,441 + MPMX19_00313 0.79 -1.2 317,442 - MPMX19_00313 0.79 -0.9 317,442 - MPMX19_00313 0.79 -2.4 317,442 - MPMX19_00313 0.79 -0.9 317,442 - MPMX19_00313 0.79 +0.8 317,442 - MPMX19_00313 0.79 -0.2 317,442 - MPMX19_00313 0.79 -1.8
Or see this region's nucleotide sequence