Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00186 and MPMX19_00187 are separated by 834 nucleotides
MPMX19_00186: MPMX19_00186 - hypothetical protein, at 195,602 to 195,994
_00186
MPMX19_00187: MPMX19_00187 - Methionine aminopeptidase, at 196,829 to 197,575
_00187
Position (kb) 195
196 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 195.368 kb on + strand at 195.377 kb on + strand at 195.466 kb on - strand at 195.466 kb on - strand at 195.476 kb on - strand at 195.487 kb on + strand at 195.488 kb on - strand at 195.536 kb on + strand at 195.598 kb on + strand at 195.631 kb on - strand at 195.679 kb on + strand, within MPMX19_00186 at 195.680 kb on - strand, within MPMX19_00186 at 195.752 kb on + strand, within MPMX19_00186 at 195.762 kb on - strand, within MPMX19_00186 at 195.764 kb on - strand, within MPMX19_00186 at 195.969 kb on + strand at 196.013 kb on + strand at 196.039 kb on + strand at 196.112 kb on - strand at 196.112 kb on - strand at 196.112 kb on - strand at 196.120 kb on + strand at 196.120 kb on + strand at 196.120 kb on + strand at 196.121 kb on - strand at 196.200 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.328 kb on + strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.329 kb on - strand at 196.402 kb on + strand at 196.403 kb on - strand at 196.403 kb on - strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.478 kb on + strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.479 kb on - strand at 196.535 kb on + strand at 196.536 kb on - strand at 196.624 kb on - strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.825 kb on + strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.826 kb on - strand at 196.857 kb on + strand at 196.857 kb on + strand at 196.858 kb on - strand at 196.858 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 195,368 + -1.0 195,377 + -2.5 195,466 - -2.1 195,466 - -0.0 195,476 - +1.2 195,487 + -1.0 195,488 - -1.3 195,536 + -1.2 195,598 + -1.7 195,631 - -1.1 195,679 + MPMX19_00186 0.20 -3.1 195,680 - MPMX19_00186 0.20 -0.3 195,752 + MPMX19_00186 0.38 -0.4 195,762 - MPMX19_00186 0.41 +1.0 195,764 - MPMX19_00186 0.41 -1.0 195,969 + -1.8 196,013 + -1.8 196,039 + -1.0 196,112 - -0.5 196,112 - -0.7 196,112 - -1.2 196,120 + -0.7 196,120 + -1.4 196,120 + -1.8 196,121 - +0.2 196,200 + +1.5 196,328 + -0.2 196,328 + -1.0 196,328 + -1.1 196,328 + -0.5 196,328 + +0.9 196,328 + -1.3 196,328 + -1.6 196,328 + -0.9 196,328 + +0.1 196,328 + -1.9 196,329 - -0.1 196,329 - -0.5 196,329 - +0.8 196,329 - -0.8 196,329 - -0.4 196,329 - +0.5 196,329 - +0.6 196,329 - -2.2 196,329 - -0.4 196,329 - +1.5 196,329 - -1.9 196,402 + -1.0 196,403 - +0.9 196,403 - -0.1 196,478 + -2.7 196,478 + -1.5 196,478 + -0.1 196,478 + -2.1 196,478 + -0.4 196,478 + -0.5 196,478 + -0.2 196,478 + -0.0 196,479 - -1.0 196,479 - -0.8 196,479 - -2.5 196,479 - -0.3 196,479 - -0.8 196,479 - +0.2 196,479 - -0.7 196,535 + -1.3 196,536 - -0.9 196,624 - -0.5 196,825 + +1.4 196,825 + -1.2 196,825 + +0.4 196,825 + -2.7 196,825 + -0.0 196,825 + -1.6 196,825 + -2.1 196,825 + +0.6 196,826 - +0.8 196,826 - -1.8 196,826 - -1.8 196,826 - -1.4 196,857 + -0.7 196,857 + -0.5 196,858 - +1.3 196,858 - -0.4
Or see this region's nucleotide sequence