Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00129 and MPMX19_00130 are separated by 439 nucleotides
MPMX19_00129: MPMX19_00129 - hypothetical protein, at 140,366 to 140,632
_00129
MPMX19_00130: MPMX19_00130 - hypothetical protein, at 141,072 to 142,259
_00130
Position (kb) 140
141 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 139.650 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.879 kb on + strand at 140.177 kb on + strand at 140.177 kb on + strand at 140.177 kb on + strand at 140.419 kb on + strand, within MPMX19_00129 at 140.470 kb on + strand, within MPMX19_00129 at 140.470 kb on + strand, within MPMX19_00129 at 140.938 kb on + strand at 140.939 kb on - strand at 140.939 kb on - strand at 141.009 kb on - strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.102 kb on + strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.103 kb on - strand at 141.266 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.441 kb on + strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.442 kb on - strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.486 kb on + strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130 at 141.487 kb on - strand, within MPMX19_00130
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 139,650 - -1.7 139,675 - -1.9 139,675 - -3.3 139,675 - +0.2 139,879 + -0.9 140,177 + -1.2 140,177 + -0.9 140,177 + -2.4 140,419 + MPMX19_00129 0.20 -1.0 140,470 + MPMX19_00129 0.39 -1.5 140,470 + MPMX19_00129 0.39 +1.0 140,938 + -0.0 140,939 - -1.0 140,939 - -0.8 141,009 - +0.6 141,102 + -1.0 141,102 + -0.4 141,102 + +0.5 141,102 + -0.2 141,102 + -2.4 141,102 + -2.3 141,102 + -1.0 141,102 + +0.6 141,102 + -0.5 141,102 + -0.7 141,102 + -1.0 141,102 + +0.8 141,102 + -0.3 141,102 + +0.2 141,102 + -2.9 141,103 - -0.8 141,103 - -1.0 141,103 - +1.8 141,103 - +0.9 141,103 - -1.4 141,103 - +0.3 141,103 - -1.4 141,103 - -0.2 141,103 - -1.4 141,266 + MPMX19_00130 0.16 -1.6 141,441 + MPMX19_00130 0.31 -1.9 141,441 + MPMX19_00130 0.31 -0.7 141,441 + MPMX19_00130 0.31 -1.6 141,441 + MPMX19_00130 0.31 +0.4 141,441 + MPMX19_00130 0.31 +0.8 141,441 + MPMX19_00130 0.31 -0.8 141,442 - MPMX19_00130 0.31 -0.4 141,442 - MPMX19_00130 0.31 +1.5 141,442 - MPMX19_00130 0.31 -0.4 141,442 - MPMX19_00130 0.31 -1.0 141,442 - MPMX19_00130 0.31 -0.9 141,442 - MPMX19_00130 0.31 -1.5 141,442 - MPMX19_00130 0.31 -1.0 141,442 - MPMX19_00130 0.31 -1.2 141,486 + MPMX19_00130 0.35 +0.4 141,486 + MPMX19_00130 0.35 +0.8 141,486 + MPMX19_00130 0.35 -1.1 141,486 + MPMX19_00130 0.35 +0.6 141,486 + MPMX19_00130 0.35 -0.9 141,486 + MPMX19_00130 0.35 +0.8 141,486 + MPMX19_00130 0.35 -2.1 141,486 + MPMX19_00130 0.35 -1.2 141,486 + MPMX19_00130 0.35 -0.8 141,486 + MPMX19_00130 0.35 -2.0 141,487 - MPMX19_00130 0.35 +0.6 141,487 - MPMX19_00130 0.35 +0.4 141,487 - MPMX19_00130 0.35 +0.1 141,487 - MPMX19_00130 0.35 +0.8 141,487 - MPMX19_00130 0.35 +0.4 141,487 - MPMX19_00130 0.35 -2.0 141,487 - MPMX19_00130 0.35 -0.9 141,487 - MPMX19_00130 0.35 -1.0 141,487 - MPMX19_00130 0.35 -0.3 141,487 - MPMX19_00130 0.35 -0.8 141,487 - MPMX19_00130 0.35 -0.5 141,487 - MPMX19_00130 0.35 -0.7 141,487 - MPMX19_00130 0.35 +0.5 141,487 - MPMX19_00130 0.35 +0.0 141,487 - MPMX19_00130 0.35 -0.6
Or see this region's nucleotide sequence