Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00117 and MPMX19_00118 are separated by 371 nucleotides MPMX19_00118 and MPMX19_00119 are separated by 129 nucleotides
MPMX19_00117: MPMX19_00117 - Protein translocase subunit SecA, at 127,534 to 130,269
_00117
MPMX19_00118: MPMX19_00118 - putative parvulin-type peptidyl-prolyl cis-trans isomerase, at 130,641 to 131,699
_00118
MPMX19_00119: MPMX19_00119 - Arginine biosynthesis bifunctional protein ArgJ, at 131,829 to 133,067
_00119
Position (kb) 130
131
132 Strain fitness (log2 ratio) -2
-1
0
1
2 at 130.285 kb on - strand at 130.285 kb on - strand at 130.285 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.324 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.330 kb on - strand at 130.524 kb on - strand at 130.524 kb on - strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.546 kb on + strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.547 kb on - strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.598 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.608 kb on + strand at 130.609 kb on - strand at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 130.992 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.046 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.124 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118 at 131.178 kb on + strand, within MPMX19_00118 at 131.361 kb on + strand, within MPMX19_00118 at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.697 kb on + strand at 131.698 kb on - strand at 131.698 kb on - strand at 131.698 kb on - strand at 131.698 kb on - strand at 131.698 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 130,285 - -0.9 130,285 - -1.7 130,285 - -2.0 130,324 - -0.4 130,324 - -0.6 130,324 - +0.3 130,324 - -1.7 130,324 - +0.9 130,324 - -2.3 130,324 - +0.3 130,324 - +0.9 130,324 - +0.1 130,324 - +0.4 130,324 - -0.0 130,324 - +1.0 130,324 - +0.1 130,324 - +0.9 130,324 - -0.1 130,324 - -1.0 130,324 - -0.8 130,324 - -0.2 130,330 - -0.8 130,330 - -0.8 130,330 - -0.6 130,330 - -0.5 130,524 - -0.0 130,524 - -0.3 130,546 + -1.2 130,546 + -1.0 130,546 + +0.4 130,546 + -0.0 130,546 + -1.8 130,546 + -0.9 130,546 + +0.6 130,546 + -0.5 130,546 + +0.0 130,546 + -0.4 130,546 + +1.8 130,546 + -1.0 130,546 + -0.2 130,547 - +0.9 130,547 - -0.3 130,547 - +0.6 130,547 - -0.8 130,547 - +0.6 130,547 - -1.2 130,547 - +0.7 130,547 - +1.5 130,547 - -0.0 130,547 - +0.9 130,598 + -0.4 130,598 + -1.4 130,598 + -0.2 130,598 + -1.0 130,598 + -0.5 130,608 + -0.5 130,608 + -1.0 130,608 + +1.5 130,608 + -0.4 130,608 + -1.4 130,608 + -1.0 130,608 + +0.4 130,608 + -0.4 130,608 + +0.4 130,608 + -1.0 130,608 + -1.0 130,608 + +0.8 130,608 + -2.2 130,609 - -0.0 130,992 + MPMX19_00118 0.33 -1.0 130,992 + MPMX19_00118 0.33 -0.0 130,992 + MPMX19_00118 0.33 -2.7 130,992 + MPMX19_00118 0.33 -2.3 130,992 + MPMX19_00118 0.33 -1.9 130,992 + MPMX19_00118 0.33 -0.5 130,992 + MPMX19_00118 0.33 -0.9 130,992 + MPMX19_00118 0.33 +0.4 131,046 + MPMX19_00118 0.38 -1.0 131,046 + MPMX19_00118 0.38 -0.9 131,046 + MPMX19_00118 0.38 +1.2 131,046 + MPMX19_00118 0.38 -1.8 131,124 + MPMX19_00118 0.46 -1.5 131,124 + MPMX19_00118 0.46 -1.2 131,124 + MPMX19_00118 0.46 -0.2 131,124 + MPMX19_00118 0.46 -0.5 131,124 + MPMX19_00118 0.46 -0.4 131,124 + MPMX19_00118 0.46 -1.0 131,124 + MPMX19_00118 0.46 -0.8 131,178 + MPMX19_00118 0.51 -0.7 131,178 + MPMX19_00118 0.51 -0.7 131,178 + MPMX19_00118 0.51 -0.1 131,361 + MPMX19_00118 0.68 +0.6 131,697 + -0.3 131,697 + +1.1 131,697 + -1.8 131,697 + +0.2 131,697 + +0.4 131,697 + -0.9 131,697 + -2.0 131,697 + +0.4 131,697 + -1.7 131,697 + +1.2 131,697 + +1.8 131,697 + -0.1 131,697 + +0.4 131,697 + -1.7 131,697 + -0.3 131,697 + -0.5 131,697 + +0.8 131,697 + -1.9 131,697 + -1.9 131,697 + -0.7 131,697 + -0.2 131,697 + -1.1 131,697 + -0.2 131,697 + -0.4 131,698 - +1.4 131,698 - +0.8 131,698 - +2.4 131,698 - +1.1 131,698 - -0.5
Or see this region's nucleotide sequence