Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00076 and MPMX19_00077 overlap by 59 nucleotides MPMX19_00077 and MPMX19_00078 are separated by 79 nucleotides
MPMX19_00076: MPMX19_00076 - 3-methylmercaptopropionyl-CoA dehydrogenase, at 80,915 to 82,735
_00076
MPMX19_00077: MPMX19_00077 - Ribosomal large subunit pseudouridine synthase E, at 82,677 to 83,336
_00077
MPMX19_00078: MPMX19_00078 - Glyoxylate/hydroxypyruvate reductase A, at 83,416 to 84,342
_00078
Position (kb) 82
83
84 Strain fitness (log2 ratio) -2
-1
0
1
2 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.791 kb on + strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.792 kb on - strand, within MPMX19_00076 at 81.863 kb on + strand, within MPMX19_00076 at 81.863 kb on + strand, within MPMX19_00076 at 81.863 kb on + strand, within MPMX19_00076 at 81.863 kb on + strand, within MPMX19_00076 at 81.864 kb on - strand, within MPMX19_00076 at 81.864 kb on - strand, within MPMX19_00076 at 81.864 kb on - strand, within MPMX19_00076 at 81.881 kb on + strand, within MPMX19_00076 at 81.881 kb on + strand, within MPMX19_00076 at 81.882 kb on - strand, within MPMX19_00076 at 81.882 kb on - strand, within MPMX19_00076 at 82.016 kb on + strand, within MPMX19_00076 at 82.016 kb on + strand, within MPMX19_00076 at 82.016 kb on + strand, within MPMX19_00076 at 82.016 kb on + strand, within MPMX19_00076 at 82.016 kb on + strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.017 kb on - strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.241 kb on + strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.242 kb on - strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.366 kb on + strand, within MPMX19_00076 at 82.367 kb on - strand, within MPMX19_00076 at 82.367 kb on - strand, within MPMX19_00076 at 82.367 kb on - strand, within MPMX19_00076 at 82.367 kb on - strand, within MPMX19_00076 at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.628 kb on + strand at 82.629 kb on - strand at 82.629 kb on - strand at 82.629 kb on - strand at 82.629 kb on - strand at 82.629 kb on - strand at 82.629 kb on - strand at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.122 kb on + strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.123 kb on - strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.230 kb on + strand, within MPMX19_00077 at 83.231 kb on - strand, within MPMX19_00077 at 83.231 kb on - strand, within MPMX19_00077 at 83.231 kb on - strand, within MPMX19_00077 at 83.305 kb on + strand at 83.305 kb on + strand at 83.305 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.396 kb on + strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.397 kb on - strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.400 kb on + strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.401 kb on - strand at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.707 kb on + strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.708 kb on - strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.728 kb on + strand, within MPMX19_00078 at 83.729 kb on - strand, within MPMX19_00078 at 83.752 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.828 kb on + strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.829 kb on - strand, within MPMX19_00078 at 83.882 kb on - strand, within MPMX19_00078
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 81,791 + MPMX19_00076 0.48 +0.2 81,791 + MPMX19_00076 0.48 +0.2 81,791 + MPMX19_00076 0.48 +0.2 81,791 + MPMX19_00076 0.48 +0.2 81,791 + MPMX19_00076 0.48 -0.9 81,791 + MPMX19_00076 0.48 +0.8 81,791 + MPMX19_00076 0.48 -0.7 81,791 + MPMX19_00076 0.48 -0.5 81,791 + MPMX19_00076 0.48 -1.9 81,791 + MPMX19_00076 0.48 -0.3 81,791 + MPMX19_00076 0.48 -0.7 81,791 + MPMX19_00076 0.48 -0.8 81,791 + MPMX19_00076 0.48 -0.4 81,791 + MPMX19_00076 0.48 -1.9 81,791 + MPMX19_00076 0.48 +0.7 81,791 + MPMX19_00076 0.48 -0.9 81,791 + MPMX19_00076 0.48 +1.0 81,791 + MPMX19_00076 0.48 -0.8 81,791 + MPMX19_00076 0.48 -0.3 81,791 + MPMX19_00076 0.48 -0.9 81,792 - MPMX19_00076 0.48 +1.3 81,792 - MPMX19_00076 0.48 -0.2 81,792 - MPMX19_00076 0.48 +0.5 81,792 - MPMX19_00076 0.48 +0.1 81,792 - MPMX19_00076 0.48 -1.8 81,792 - MPMX19_00076 0.48 -0.9 81,792 - MPMX19_00076 0.48 -0.5 81,792 - MPMX19_00076 0.48 +1.0 81,792 - MPMX19_00076 0.48 +0.2 81,792 - MPMX19_00076 0.48 +1.0 81,792 - MPMX19_00076 0.48 -1.2 81,792 - MPMX19_00076 0.48 +0.2 81,792 - MPMX19_00076 0.48 +0.3 81,792 - MPMX19_00076 0.48 -2.3 81,792 - MPMX19_00076 0.48 +0.5 81,792 - MPMX19_00076 0.48 +0.3 81,792 - MPMX19_00076 0.48 -1.0 81,863 + MPMX19_00076 0.52 -0.5 81,863 + MPMX19_00076 0.52 -0.1 81,863 + MPMX19_00076 0.52 +0.6 81,863 + MPMX19_00076 0.52 -1.9 81,864 - MPMX19_00076 0.52 -0.4 81,864 - MPMX19_00076 0.52 +0.7 81,864 - MPMX19_00076 0.52 -0.2 81,881 + MPMX19_00076 0.53 -1.2 81,881 + MPMX19_00076 0.53 -0.8 81,882 - MPMX19_00076 0.53 -0.2 81,882 - MPMX19_00076 0.53 -1.5 82,016 + MPMX19_00076 0.60 -0.8 82,016 + MPMX19_00076 0.60 -0.2 82,016 + MPMX19_00076 0.60 -1.2 82,016 + MPMX19_00076 0.60 +0.1 82,016 + MPMX19_00076 0.60 -0.2 82,017 - MPMX19_00076 0.61 -1.0 82,017 - MPMX19_00076 0.61 +0.9 82,017 - MPMX19_00076 0.61 -0.3 82,017 - MPMX19_00076 0.61 +1.2 82,017 - MPMX19_00076 0.61 -0.2 82,017 - MPMX19_00076 0.61 +0.2 82,017 - MPMX19_00076 0.61 -1.3 82,241 + MPMX19_00076 0.73 -0.2 82,241 + MPMX19_00076 0.73 -2.0 82,241 + MPMX19_00076 0.73 -0.3 82,241 + MPMX19_00076 0.73 -1.5 82,241 + MPMX19_00076 0.73 +0.6 82,241 + MPMX19_00076 0.73 -0.9 82,242 - MPMX19_00076 0.73 +0.2 82,242 - MPMX19_00076 0.73 -0.0 82,242 - MPMX19_00076 0.73 +0.2 82,242 - MPMX19_00076 0.73 -0.5 82,242 - MPMX19_00076 0.73 -0.0 82,242 - MPMX19_00076 0.73 -0.1 82,242 - MPMX19_00076 0.73 -0.5 82,242 - MPMX19_00076 0.73 -0.8 82,366 + MPMX19_00076 0.80 -0.5 82,366 + MPMX19_00076 0.80 -1.5 82,366 + MPMX19_00076 0.80 +0.1 82,366 + MPMX19_00076 0.80 -1.2 82,366 + MPMX19_00076 0.80 -1.0 82,366 + MPMX19_00076 0.80 -1.7 82,367 - MPMX19_00076 0.80 -0.5 82,367 - MPMX19_00076 0.80 +1.0 82,367 - MPMX19_00076 0.80 -0.8 82,367 - MPMX19_00076 0.80 -1.1 82,628 + +0.2 82,628 + -0.0 82,628 + -1.2 82,628 + -1.7 82,628 + -0.4 82,628 + -0.8 82,628 + +0.3 82,628 + +0.6 82,629 - -0.0 82,629 - -0.4 82,629 - +0.1 82,629 - +1.1 82,629 - -1.9 82,629 - -0.2 83,122 + MPMX19_00077 0.67 +0.0 83,122 + MPMX19_00077 0.67 -0.0 83,122 + MPMX19_00077 0.67 -0.2 83,122 + MPMX19_00077 0.67 -0.5 83,122 + MPMX19_00077 0.67 +1.3 83,122 + MPMX19_00077 0.67 -0.9 83,122 + MPMX19_00077 0.67 -1.0 83,122 + MPMX19_00077 0.67 -0.0 83,122 + MPMX19_00077 0.67 -2.0 83,123 - MPMX19_00077 0.68 +0.4 83,123 - MPMX19_00077 0.68 -0.2 83,123 - MPMX19_00077 0.68 -0.2 83,123 - MPMX19_00077 0.68 +0.8 83,123 - MPMX19_00077 0.68 -1.0 83,123 - MPMX19_00077 0.68 -0.3 83,123 - MPMX19_00077 0.68 -0.7 83,123 - MPMX19_00077 0.68 +0.1 83,123 - MPMX19_00077 0.68 +1.6 83,123 - MPMX19_00077 0.68 -0.6 83,123 - MPMX19_00077 0.68 +2.0 83,123 - MPMX19_00077 0.68 -0.4 83,123 - MPMX19_00077 0.68 +0.1 83,123 - MPMX19_00077 0.68 +0.5 83,123 - MPMX19_00077 0.68 -0.8 83,123 - MPMX19_00077 0.68 -1.3 83,123 - MPMX19_00077 0.68 -0.9 83,123 - MPMX19_00077 0.68 +1.3 83,123 - MPMX19_00077 0.68 -1.0 83,230 + MPMX19_00077 0.84 -1.6 83,230 + MPMX19_00077 0.84 +0.4 83,230 + MPMX19_00077 0.84 +0.3 83,230 + MPMX19_00077 0.84 +1.4 83,230 + MPMX19_00077 0.84 -0.2 83,230 + MPMX19_00077 0.84 -1.1 83,230 + MPMX19_00077 0.84 +0.5 83,231 - MPMX19_00077 0.84 +0.3 83,231 - MPMX19_00077 0.84 -0.3 83,231 - MPMX19_00077 0.84 +0.1 83,305 + +0.2 83,305 + -0.7 83,305 + +0.8 83,396 + -0.2 83,396 + -0.2 83,396 + -0.0 83,396 + +0.8 83,396 + +0.8 83,396 + -0.6 83,396 + +0.6 83,396 + +0.8 83,396 + -1.0 83,396 + -1.0 83,396 + +0.8 83,396 + +0.6 83,396 + -0.5 83,396 + -0.0 83,396 + -1.8 83,396 + -1.2 83,396 + -1.2 83,396 + +0.1 83,396 + +0.3 83,396 + -0.1 83,396 + -0.4 83,396 + -1.0 83,396 + -0.0 83,396 + -1.4 83,396 + -1.0 83,396 + -0.4 83,396 + +0.3 83,396 + -0.2 83,397 - -0.2 83,397 - +0.6 83,397 - -0.4 83,397 - -1.8 83,397 - -0.1 83,397 - -0.5 83,397 - -0.7 83,397 - -0.2 83,397 - +0.9 83,397 - -0.4 83,397 - +1.0 83,397 - -1.2 83,397 - -1.2 83,397 - -0.5 83,397 - +0.4 83,397 - -0.2 83,397 - +0.8 83,397 - +0.1 83,397 - -0.8 83,397 - -0.2 83,397 - -0.7 83,397 - -0.2 83,397 - +1.4 83,397 - +0.7 83,400 + -0.2 83,400 + -0.7 83,400 + -1.1 83,400 + -1.2 83,400 + +0.2 83,400 + -1.0 83,400 + +0.5 83,400 + -0.8 83,400 + -0.4 83,400 + +0.6 83,400 + -2.5 83,400 + +0.5 83,400 + -1.9 83,400 + -0.0 83,401 - +0.2 83,401 - +0.4 83,401 - +0.5 83,401 - -1.2 83,401 - -1.3 83,401 - +0.2 83,401 - +0.1 83,401 - +0.8 83,401 - -1.5 83,401 - -0.4 83,401 - -0.4 83,401 - +0.8 83,401 - +0.1 83,707 + MPMX19_00078 0.31 +0.8 83,707 + MPMX19_00078 0.31 -0.3 83,707 + MPMX19_00078 0.31 -0.0 83,707 + MPMX19_00078 0.31 -0.6 83,708 - MPMX19_00078 0.31 -1.0 83,708 - MPMX19_00078 0.31 -1.1 83,708 - MPMX19_00078 0.31 -1.7 83,708 - MPMX19_00078 0.31 -0.1 83,708 - MPMX19_00078 0.31 -0.4 83,708 - MPMX19_00078 0.31 +1.8 83,708 - MPMX19_00078 0.31 -0.6 83,728 + MPMX19_00078 0.34 -1.5 83,728 + MPMX19_00078 0.34 -0.8 83,728 + MPMX19_00078 0.34 -1.4 83,729 - MPMX19_00078 0.34 -0.5 83,752 + MPMX19_00078 0.36 -0.2 83,828 + MPMX19_00078 0.44 -1.9 83,828 + MPMX19_00078 0.44 -1.3 83,828 + MPMX19_00078 0.44 +0.2 83,828 + MPMX19_00078 0.44 -0.7 83,829 - MPMX19_00078 0.45 -0.4 83,829 - MPMX19_00078 0.45 -0.9 83,829 - MPMX19_00078 0.45 +0.9 83,829 - MPMX19_00078 0.45 +0.5 83,829 - MPMX19_00078 0.45 -0.3 83,882 - MPMX19_00078 0.50 -0.7
Or see this region's nucleotide sequence