Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00075

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
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78,978	+			+0.0
78,978	+			+0.5
78,978	+			-0.6
78,978	+			+0.5
78,978	+			-1.7
78,978	+			-0.7
78,978	+			-0.6
78,978	+			-1.4
78,978	+			-0.9
78,978	+			-0.0
78,978	+			+0.6
78,979	-			-0.8
78,979	-			+0.2
78,979	-			+0.2
78,979	-			+0.5
78,979	-			-0.3
78,979	-			-0.9
78,979	-			+1.0
78,979	-			-1.7
78,979	-			-1.1
78,979	-			+0.8
79,008	+			-0.3
79,008	+			-0.8
79,008	+			-0.2
79,008	+			-0.2
79,008	+			+1.3
79,008	+			+0.6
79,008	+			-0.8
79,008	+			-0.5
79,008	+			+0.1
79,008	+			-1.0
79,009	-			-1.0
79,009	-			-0.7
79,009	-			+0.2
79,184	+			-1.3
79,184	+			+0.4
79,184	+			+0.4
79,184	+			-0.0
79,184	+			-0.2
79,184	+			-1.2
79,184	+			-1.5
79,184	+			-0.2
79,184	+			-2.0
79,184	+			+1.8
79,185	-			+0.9
79,185	-			-0.9
79,185	-			-0.3
79,185	-			-0.6
79,185	-			-0.5
79,185	-			-2.1
79,185	-			-0.8
79,185	-			-0.6
79,185	-			+0.8
79,185	-			-1.5
79,185	-			+1.0
79,185	-			+0.4
79,701	-	MPMX19_00074	0.74	+1.8
79,701	-	MPMX19_00074	0.74	-0.8
79,701	-	MPMX19_00074	0.74	+1.5
79,701	-	MPMX19_00074	0.74	+0.2
79,701	-	MPMX19_00074	0.74	-0.2
79,701	-	MPMX19_00074	0.74	+0.6
79,701	-	MPMX19_00074	0.74	-0.6
80,143	+	MPMX19_00075	0.21	+0.4
80,143	+	MPMX19_00075	0.21	+0.6
80,201	-	MPMX19_00075	0.27	-2.0
80,223	+	MPMX19_00075	0.29	+0.3
80,223	+	MPMX19_00075	0.29	-0.1
80,224	-	MPMX19_00075	0.29	+0.8
80,224	-	MPMX19_00075	0.29	+0.5
80,224	-	MPMX19_00075	0.29	-0.7
80,224	-	MPMX19_00075	0.29	+0.8
80,332	+	MPMX19_00075	0.41	-1.2
80,332	+	MPMX19_00075	0.41	+1.4
80,332	+	MPMX19_00075	0.41	-1.4
80,332	+	MPMX19_00075	0.41	-1.3
80,333	-	MPMX19_00075	0.41	-0.5
80,333	-	MPMX19_00075	0.41	-1.7
80,333	-	MPMX19_00075	0.41	+0.4
80,333	-	MPMX19_00075	0.41	-1.1
80,385	+	MPMX19_00075	0.47	-2.0
80,385	+	MPMX19_00075	0.47	-1.4
80,385	+	MPMX19_00075	0.47	+0.6
80,385	+	MPMX19_00075	0.47	-0.2
80,385	+	MPMX19_00075	0.47	+0.8
80,385	+	MPMX19_00075	0.47	+0.1
80,386	-	MPMX19_00075	0.47	+0.9
80,386	-	MPMX19_00075	0.47	+0.1
80,386	-	MPMX19_00075	0.47	+0.5
80,386	-	MPMX19_00075	0.47	-1.8
80,386	-	MPMX19_00075	0.47	+1.2
80,386	-	MPMX19_00075	0.47	-0.4
80,386	-	MPMX19_00075	0.47	-0.2
80,665	+	MPMX19_00075	0.77	-0.2
80,665	+	MPMX19_00075	0.77	+1.1
80,665	+	MPMX19_00075	0.77	+0.1
80,666	-	MPMX19_00075	0.77	+1.3
80,666	-	MPMX19_00075	0.77	+0.6
80,666	-	MPMX19_00075	0.77	+0.8
80,666	-	MPMX19_00075	0.77	+0.1
80,666	-	MPMX19_00075	0.77	-0.2
80,666	-	MPMX19_00075	0.77	+0.5
80,666	-	MPMX19_00075	0.77	-0.1
80,707	+	MPMX19_00075	0.82	+0.8
80,707	+	MPMX19_00075	0.82	-1.8
80,707	+	MPMX19_00075	0.82	-0.3
80,707	+	MPMX19_00075	0.82	-0.1
80,707	+	MPMX19_00075	0.82	+0.5
80,707	+	MPMX19_00075	0.82	-0.4
80,707	+	MPMX19_00075	0.82	-0.8
80,707	+	MPMX19_00075	0.82	-2.3
80,707	+	MPMX19_00075	0.82	+0.1
80,707	+	MPMX19_00075	0.82	+0.4
80,707	+	MPMX19_00075	0.82	-0.8
80,707	+	MPMX19_00075	0.82	+0.6
80,707	+	MPMX19_00075	0.82	+1.3
80,707	+	MPMX19_00075	0.82	-1.3
80,707	+	MPMX19_00075	0.82	-0.3
80,707	+	MPMX19_00075	0.82	+1.8
80,707	+	MPMX19_00075	0.82	+0.2
80,707	+	MPMX19_00075	0.82	+0.4
80,707	+	MPMX19_00075	0.82	+1.1
80,707	+	MPMX19_00075	0.82	-0.1
80,707	+	MPMX19_00075	0.82	+0.3
80,708	-	MPMX19_00075	0.82	-1.3
80,708	-	MPMX19_00075	0.82	-0.5
80,708	-	MPMX19_00075	0.82	-2.3
80,708	-	MPMX19_00075	0.82	-0.8
80,708	-	MPMX19_00075	0.82	+1.3
80,708	-	MPMX19_00075	0.82	-0.6
80,708	-	MPMX19_00075	0.82	-0.7
80,708	-	MPMX19_00075	0.82	-1.4
80,708	-	MPMX19_00075	0.82	+0.5
80,708	-	MPMX19_00075	0.82	-0.7
80,708	-	MPMX19_00075	0.82	+0.5
80,708	-	MPMX19_00075	0.82	+0.1
80,708	-	MPMX19_00075	0.82	-0.6
80,708	-	MPMX19_00075	0.82	+0.5
80,708	-	MPMX19_00075	0.82	-1.2
80,708	-	MPMX19_00075	0.82	-0.7
80,821	+			+0.5
80,821	+			+0.3
80,822	-			-0.7
80,822	-			+0.6
80,822	-			-0.4
80,936	+			+1.5
80,936	+			+0.8
80,936	+			-0.3
80,936	+			-0.4
80,936	+			+0.7
80,936	+			-0.9
80,937	-			+0.9
80,937	-			-0.6
80,937	-			+1.6
80,937	-			+0.0
81,347	+	MPMX19_00076	0.24	+0.2
81,347	+	MPMX19_00076	0.24	-0.7
81,348	-	MPMX19_00076	0.24	+0.2
81,348	-	MPMX19_00076	0.24	-0.6
81,348	-	MPMX19_00076	0.24	+0.6
81,374	+	MPMX19_00076	0.25	-0.0
81,374	+	MPMX19_00076	0.25	-2.5
81,374	+	MPMX19_00076	0.25	+0.7
81,374	+	MPMX19_00076	0.25	+0.3
81,374	+	MPMX19_00076	0.25	+0.6
81,374	+	MPMX19_00076	0.25	-2.7
81,374	+	MPMX19_00076	0.25	-0.5
81,374	+	MPMX19_00076	0.25	-1.1
81,374	+	MPMX19_00076	0.25	-0.1
81,374	+	MPMX19_00076	0.25	-2.1
81,374	+	MPMX19_00076	0.25	-1.9
81,374	+	MPMX19_00076	0.25	-0.7
81,374	+	MPMX19_00076	0.25	+0.1
81,374	+	MPMX19_00076	0.25	-0.0
81,374	+	MPMX19_00076	0.25	-0.8
81,374	+	MPMX19_00076	0.25	+0.1
81,374	+	MPMX19_00076	0.25	-1.0
81,374	+	MPMX19_00076	0.25	-1.0
81,375	-	MPMX19_00076	0.25	-0.7
81,375	-	MPMX19_00076	0.25	-0.1
81,375	-	MPMX19_00076	0.25	-0.6
81,375	-	MPMX19_00076	0.25	-0.2
81,375	-	MPMX19_00076	0.25	-1.3
81,375	-	MPMX19_00076	0.25	+0.4
81,375	-	MPMX19_00076	0.25	+0.8
81,375	-	MPMX19_00076	0.25	-0.4
81,375	-	MPMX19_00076	0.25	+0.3
81,375	-	MPMX19_00076	0.25	+2.4
81,375	-	MPMX19_00076	0.25	-1.5
81,375	-	MPMX19_00076	0.25	+0.2
81,488	+	MPMX19_00076	0.31	+0.8
81,488	+	MPMX19_00076	0.31	-0.7
81,488	+	MPMX19_00076	0.31	-1.2
81,488	+	MPMX19_00076	0.31	-2.8
81,488	+	MPMX19_00076	0.31	+1.5
81,488	+	MPMX19_00076	0.31	-0.6
81,488	+	MPMX19_00076	0.31	-1.0
81,488	+	MPMX19_00076	0.31	-0.8
81,488	+	MPMX19_00076	0.31	-0.1
81,488	+	MPMX19_00076	0.31	-0.8
81,488	+	MPMX19_00076	0.31	+0.5
81,488	+	MPMX19_00076	0.31	+0.6
81,488	+	MPMX19_00076	0.31	+0.8
81,488	+	MPMX19_00076	0.31	+0.0
81,488	+	MPMX19_00076	0.31	+0.3
81,488	+	MPMX19_00076	0.31	-0.4
81,488	+	MPMX19_00076	0.31	-0.0
81,489	-	MPMX19_00076	0.32	-0.9
81,489	-	MPMX19_00076	0.32	-0.4
81,489	-	MPMX19_00076	0.32	-0.5
81,489	-	MPMX19_00076	0.32	-0.8
81,489	-	MPMX19_00076	0.32	-0.5
81,489	-	MPMX19_00076	0.32	+0.6
81,489	-	MPMX19_00076	0.32	+0.7
81,489	-	MPMX19_00076	0.32	+0.1
81,489	-	MPMX19_00076	0.32	-0.8
81,489	-	MPMX19_00076	0.32	-1.7
81,489	-	MPMX19_00076	0.32	-0.1
81,489	-	MPMX19_00076	0.32	-0.3
81,489	-	MPMX19_00076	0.32	-0.5
81,489	-	MPMX19_00076	0.32	+0.8
81,489	-	MPMX19_00076	0.32	-0.1
81,489	-	MPMX19_00076	0.32	+0.6
81,489	-	MPMX19_00076	0.32	-1.8
81,489	-	MPMX19_00076	0.32	+0.1
81,489	-	MPMX19_00076	0.32	+0.5
81,489	-	MPMX19_00076	0.32	+0.1
81,489	-	MPMX19_00076	0.32	-1.8
81,489	-	MPMX19_00076	0.32	+0.8
81,489	-	MPMX19_00076	0.32	+0.1
81,489	-	MPMX19_00076	0.32	+0.5
81,489	-	MPMX19_00076	0.32	-0.6
81,521	+	MPMX19_00076	0.33	+0.8
81,521	+	MPMX19_00076	0.33	+0.4
81,521	+	MPMX19_00076	0.33	-0.5
81,521	+	MPMX19_00076	0.33	+0.0
81,522	-	MPMX19_00076	0.33	+1.1
81,522	-	MPMX19_00076	0.33	-0.5
81,522	-	MPMX19_00076	0.33	-1.0
81,522	-	MPMX19_00076	0.33	-0.8
81,522	-	MPMX19_00076	0.33	+0.9
81,791	+	MPMX19_00076	0.48	+0.2
81,791	+	MPMX19_00076	0.48	+0.2
81,791	+	MPMX19_00076	0.48	+0.2
81,791	+	MPMX19_00076	0.48	+0.2
81,791	+	MPMX19_00076	0.48	-0.9
81,791	+	MPMX19_00076	0.48	+0.8
81,791	+	MPMX19_00076	0.48	-0.7
81,791	+	MPMX19_00076	0.48	-0.5
81,791	+	MPMX19_00076	0.48	-1.9
81,791	+	MPMX19_00076	0.48	-0.3
81,791	+	MPMX19_00076	0.48	-0.7
81,791	+	MPMX19_00076	0.48	-0.8
81,791	+	MPMX19_00076	0.48	-0.4
81,791	+	MPMX19_00076	0.48	-1.9
81,791	+	MPMX19_00076	0.48	+0.7
81,791	+	MPMX19_00076	0.48	-0.9
81,791	+	MPMX19_00076	0.48	+1.0
81,791	+	MPMX19_00076	0.48	-0.8
81,791	+	MPMX19_00076	0.48	-0.3
81,791	+	MPMX19_00076	0.48	-0.9
81,792	-	MPMX19_00076	0.48	+1.3
81,792	-	MPMX19_00076	0.48	-0.2
81,792	-	MPMX19_00076	0.48	+0.5
81,792	-	MPMX19_00076	0.48	+0.1
81,792	-	MPMX19_00076	0.48	-1.8
81,792	-	MPMX19_00076	0.48	-0.9
81,792	-	MPMX19_00076	0.48	-0.5
81,792	-	MPMX19_00076	0.48	+1.0
81,792	-	MPMX19_00076	0.48	+0.2
81,792	-	MPMX19_00076	0.48	+1.0
81,792	-	MPMX19_00076	0.48	-1.2
81,792	-	MPMX19_00076	0.48	+0.2
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	-2.3
81,792	-	MPMX19_00076	0.48	+0.5
81,792	-	MPMX19_00076	0.48	+0.3
81,792	-	MPMX19_00076	0.48	-1.0
81,863	+	MPMX19_00076	0.52	-0.5
81,863	+	MPMX19_00076	0.52	-0.1
81,863	+	MPMX19_00076	0.52	+0.6
81,863	+	MPMX19_00076	0.52	-1.9
81,864	-	MPMX19_00076	0.52	-0.4
81,864	-	MPMX19_00076	0.52	+0.7
81,864	-	MPMX19_00076	0.52	-0.2

Or see this region's nucleotide sequence