Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00058 and MPMX19_00059 are separated by 49 nucleotides MPMX19_00059 and MPMX19_00060 are separated by 79 nucleotides MPMX19_00060 and MPMX19_00061 are separated by 10 nucleotides
MPMX19_00058: MPMX19_00058 - hypothetical protein, at 61,900 to 62,925
_00058
MPMX19_00059: MPMX19_00059 - hypothetical protein, at 62,975 to 63,505
_00059
MPMX19_00060: MPMX19_00060 - hypothetical protein, at 63,585 to 63,932
_00060
MPMX19_00061: MPMX19_00061 - L-lysine 2,3-aminomutase, at 63,943 to 64,980
_00061
Position (kb) 62
63
64 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 62.962 kb on + strand at 62.962 kb on + strand at 62.963 kb on - strand at 62.963 kb on - strand at 62.963 kb on - strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.990 kb on + strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 62.991 kb on - strand at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.266 kb on + strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.267 kb on - strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.287 kb on + strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.288 kb on - strand, within MPMX19_00059 at 63.506 kb on + strand at 63.514 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.562 kb on + strand at 63.563 kb on - strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.584 kb on + strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.585 kb on - strand at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.633 kb on + strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.634 kb on - strand, within MPMX19_00060 at 63.694 kb on + strand, within MPMX19_00060 at 63.694 kb on + strand, within MPMX19_00060 at 63.695 kb on - strand, within MPMX19_00060 at 63.954 kb on - strand at 64.067 kb on + strand, within MPMX19_00061 at 64.067 kb on + strand, within MPMX19_00061 at 64.067 kb on + strand, within MPMX19_00061 at 64.185 kb on - strand, within MPMX19_00061 at 64.185 kb on - strand, within MPMX19_00061 at 64.185 kb on - strand, within MPMX19_00061
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 62,962 + -1.0 62,962 + -1.0 62,963 - -0.1 62,963 - +0.6 62,963 - -0.1 62,990 + +0.8 62,990 + -1.7 62,990 + +0.0 62,990 + -1.5 62,990 + -0.0 62,990 + -2.0 62,990 + +0.3 62,990 + +1.1 62,990 + -0.1 62,990 + -0.9 62,990 + +2.1 62,990 + +0.8 62,990 + +0.6 62,990 + +0.2 62,990 + -0.5 62,990 + +0.2 62,990 + +0.0 62,991 - +0.4 62,991 - +0.3 62,991 - -1.0 62,991 - +0.4 62,991 - -0.9 62,991 - +0.1 62,991 - -0.1 62,991 - +1.3 62,991 - -0.7 62,991 - +0.2 62,991 - -1.5 63,266 + MPMX19_00059 0.55 -1.0 63,266 + MPMX19_00059 0.55 -1.0 63,266 + MPMX19_00059 0.55 -1.2 63,266 + MPMX19_00059 0.55 -1.9 63,266 + MPMX19_00059 0.55 -1.6 63,266 + MPMX19_00059 0.55 +1.1 63,266 + MPMX19_00059 0.55 -1.4 63,266 + MPMX19_00059 0.55 +0.6 63,266 + MPMX19_00059 0.55 -0.2 63,266 + MPMX19_00059 0.55 -0.7 63,266 + MPMX19_00059 0.55 -0.5 63,266 + MPMX19_00059 0.55 -1.9 63,266 + MPMX19_00059 0.55 +0.2 63,266 + MPMX19_00059 0.55 -0.3 63,266 + MPMX19_00059 0.55 -1.0 63,266 + MPMX19_00059 0.55 -1.2 63,266 + MPMX19_00059 0.55 +0.2 63,266 + MPMX19_00059 0.55 -0.4 63,266 + MPMX19_00059 0.55 -0.5 63,266 + MPMX19_00059 0.55 -1.1 63,266 + MPMX19_00059 0.55 -0.5 63,267 - MPMX19_00059 0.55 +0.5 63,267 - MPMX19_00059 0.55 +0.5 63,267 - MPMX19_00059 0.55 +0.4 63,267 - MPMX19_00059 0.55 -0.9 63,267 - MPMX19_00059 0.55 -0.6 63,267 - MPMX19_00059 0.55 +1.4 63,267 - MPMX19_00059 0.55 +1.4 63,267 - MPMX19_00059 0.55 -0.9 63,267 - MPMX19_00059 0.55 -0.8 63,267 - MPMX19_00059 0.55 +0.4 63,267 - MPMX19_00059 0.55 -0.7 63,267 - MPMX19_00059 0.55 -0.4 63,267 - MPMX19_00059 0.55 -0.5 63,267 - MPMX19_00059 0.55 -1.2 63,267 - MPMX19_00059 0.55 -0.5 63,267 - MPMX19_00059 0.55 -1.0 63,267 - MPMX19_00059 0.55 -0.2 63,267 - MPMX19_00059 0.55 -1.2 63,267 - MPMX19_00059 0.55 +1.0 63,287 + MPMX19_00059 0.59 -0.5 63,287 + MPMX19_00059 0.59 -1.4 63,287 + MPMX19_00059 0.59 +0.4 63,287 + MPMX19_00059 0.59 +0.2 63,288 - MPMX19_00059 0.59 -2.6 63,288 - MPMX19_00059 0.59 -1.8 63,288 - MPMX19_00059 0.59 +1.1 63,288 - MPMX19_00059 0.59 +0.8 63,288 - MPMX19_00059 0.59 +0.0 63,288 - MPMX19_00059 0.59 -0.4 63,288 - MPMX19_00059 0.59 +0.7 63,506 + -1.5 63,514 + -0.2 63,562 + -1.5 63,562 + -0.1 63,562 + -1.4 63,562 + -0.5 63,563 - +0.6 63,584 + -0.8 63,584 + -1.4 63,584 + -0.9 63,584 + +0.1 63,584 + -0.1 63,584 + +0.5 63,584 + -1.1 63,584 + -1.2 63,584 + +0.0 63,585 - -0.8 63,585 - +0.1 63,585 - +0.3 63,585 - -0.0 63,633 + MPMX19_00060 0.14 -1.0 63,633 + MPMX19_00060 0.14 -0.5 63,633 + MPMX19_00060 0.14 -0.1 63,633 + MPMX19_00060 0.14 -0.4 63,633 + MPMX19_00060 0.14 -0.4 63,633 + MPMX19_00060 0.14 -0.8 63,633 + MPMX19_00060 0.14 +0.0 63,633 + MPMX19_00060 0.14 -3.0 63,633 + MPMX19_00060 0.14 +0.3 63,634 - MPMX19_00060 0.14 -0.3 63,634 - MPMX19_00060 0.14 -0.7 63,634 - MPMX19_00060 0.14 +0.0 63,634 - MPMX19_00060 0.14 -0.4 63,634 - MPMX19_00060 0.14 -0.4 63,634 - MPMX19_00060 0.14 +1.1 63,634 - MPMX19_00060 0.14 -0.3 63,634 - MPMX19_00060 0.14 +1.1 63,634 - MPMX19_00060 0.14 +0.2 63,634 - MPMX19_00060 0.14 -0.5 63,694 + MPMX19_00060 0.31 +0.2 63,694 + MPMX19_00060 0.31 +0.9 63,695 - MPMX19_00060 0.32 +0.5 63,954 - -1.4 64,067 + MPMX19_00061 0.12 -0.0 64,067 + MPMX19_00061 0.12 -2.1 64,067 + MPMX19_00061 0.12 -0.8 64,185 - MPMX19_00061 0.23 -0.2 64,185 - MPMX19_00061 0.23 -1.5 64,185 - MPMX19_00061 0.23 -0.2
Or see this region's nucleotide sequence