Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00030 and MPMX19_00031 are separated by 115 nucleotides MPMX19_00031 and MPMX19_00032 are separated by 96 nucleotides
MPMX19_00030: MPMX19_00030 - D-inositol-3-phosphate glycosyltransferase, at 35,151 to 36,401
_00030
MPMX19_00031: MPMX19_00031 - hypothetical protein, at 36,517 to 37,311
_00031
MPMX19_00032: MPMX19_00032 - tRNA-Ser, at 37,408 to 37,498
_00032
Position (kb)
36
37
38 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.556 kb on - strand at 36.556 kb on - strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 37.592 kb on - strand at 37.592 kb on - strand at 37.592 kb on - strand at 37.614 kb on + strand at 37.615 kb on - strand at 37.630 kb on - strand at 37.663 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 36,517 - +0.6 36,517 - +0.1 36,517 - -0.2 36,517 - +1.8 36,517 - +0.8 36,517 - +0.0 36,517 - +0.4 36,517 - -0.2 36,517 - -1.5 36,517 - -0.6 36,556 - +0.3 36,556 - -1.5 36,581 + -0.5 36,581 + -0.5 36,581 + -1.6 36,581 + +1.1 36,582 - +0.1 36,582 - -0.8 36,582 - -1.0 36,582 - +0.8 36,582 - -0.7 36,582 - -0.4 36,582 - +1.2 36,582 - +1.1 36,582 - -1.5 36,582 - +0.1 36,582 - -0.0 36,582 - +0.6 36,582 - -1.2 36,582 - -2.8 36,587 - -0.9 36,587 - -2.0 36,587 - -0.9 36,587 - -0.5 36,587 - -0.8 36,587 - -0.2 36,587 - -0.5 36,733 + MPMX19_00031 0.27 -2.0 36,733 + MPMX19_00031 0.27 -0.5 36,733 + MPMX19_00031 0.27 -0.2 36,733 + MPMX19_00031 0.27 -0.8 36,733 + MPMX19_00031 0.27 -1.3 37,592 - -0.5 37,592 - +0.3 37,592 - +1.1 37,614 + -0.4 37,615 - +1.2 37,630 - -0.2 37,663 + -0.8 37,690 + +0.5 37,690 + -2.2 37,690 + -0.6 37,690 + +0.4 37,690 + -0.2 37,690 + -0.7 37,690 + +0.6 37,690 + -0.1 37,690 + -0.4 37,691 - -2.8 37,691 - +0.5 37,691 - -1.0 37,691 - +0.6 37,691 - +0.8 37,691 - -0.8 37,691 - -0.5 37,691 - +0.1 37,705 - -0.5 37,705 - +2.2 37,705 - +1.4 37,705 - -1.0
Or see this region's nucleotide sequence