Strain Fitness in Escherichia coli ECOR27 around NOLOHH_24425
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
31,451 | + | +2.3 | |||
31,562 | + | +0.3 | |||
31,562 | + | +1.7 | |||
31,563 | - | +1.0 | |||
31,563 | - | +2.3 | |||
31,568 | + | -1.3 | |||
31,573 | - | +0.7 | |||
31,641 | + | +0.1 | |||
31,641 | + | -0.6 | |||
31,847 | + | +1.2 | |||
31,879 | + | +0.2 | |||
31,879 | + | -0.1 | |||
31,879 | + | +0.6 | |||
31,883 | + | +0.1 | |||
31,912 | + | +0.2 | |||
31,950 | + | +0.4 | |||
32,469 | + | repA | NOLOHH_24425 | 0.46 | +1.7 |
32,516 | + | repA | NOLOHH_24425 | 0.51 | -0.9 |
32,527 | + | repA | NOLOHH_24425 | 0.52 | -0.9 |
32,997 | + | +0.4 | |||
32,997 | + | +2.0 | |||
33,034 | - | +0.4 | |||
33,040 | + | -0.2 | |||
33,041 | - | +1.7 | |||
33,041 | - | +0.3 | |||
33,043 | - | +0.3 | |||
33,081 | - | NOLOHH_24430 | 0.10 | -0.3 | |
33,083 | - | NOLOHH_24430 | 0.12 | -0.0 | |
33,083 | - | NOLOHH_24430 | 0.12 | +1.1 | |
33,135 | + | NOLOHH_24430 | 0.55 | +0.7 | |
33,135 | + | NOLOHH_24430 | 0.55 | +1.7 | |
33,136 | - | NOLOHH_24430 | 0.56 | -0.0 | |
33,139 | + | NOLOHH_24430 | 0.58 | -2.3 | |
33,139 | + | NOLOHH_24430 | 0.58 | -0.3 | |
33,139 | + | NOLOHH_24430 | 0.58 | +0.0 | |
33,140 | - | NOLOHH_24430 | 0.59 | -0.3 | |
33,140 | - | NOLOHH_24430 | 0.59 | +1.7 | |
33,182 | - | -0.2 | |||
33,207 | + | +0.7 | |||
33,211 | + | +1.1 | |||
33,226 | - | +0.7 | |||
33,226 | - | -1.6 | |||
33,230 | + | +0.4 | |||
33,231 | - | -0.4 | |||
33,255 | + | -0.9 | |||
33,255 | + | -0.6 | |||
33,255 | + | -0.2 | |||
33,256 | - | -0.2 | |||
33,256 | - | +0.6 | |||
33,256 | - | +0.1 | |||
33,258 | - | +0.5 | |||
33,258 | - | -0.1 | |||
33,259 | + | -2.5 | |||
33,259 | + | +0.7 | |||
33,259 | + | -0.3 | |||
33,260 | - | -0.9 | |||
33,362 | - | xerD | NOLOHH_24435 | 0.11 | +1.7 |
33,382 | + | xerD | NOLOHH_24435 | 0.14 | -1.6 |
33,383 | - | xerD | NOLOHH_24435 | 0.14 | +0.7 |
33,384 | + | xerD | NOLOHH_24435 | 0.14 | -1.3 |
33,385 | - | xerD | NOLOHH_24435 | 0.14 | +0.8 |
33,470 | - | xerD | NOLOHH_24435 | 0.26 | +2.3 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | +0.7 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | +0.7 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | -0.7 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | +0.1 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | -0.9 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | +1.1 |
33,471 | + | xerD | NOLOHH_24435 | 0.26 | +0.5 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | -0.9 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | +1.5 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | +1.1 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | +0.6 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | +0.1 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | +1.7 |
33,472 | - | xerD | NOLOHH_24435 | 0.26 | -0.3 |
33,645 | + | xerD | NOLOHH_24435 | 0.50 | -0.9 |
33,646 | - | xerD | NOLOHH_24435 | 0.50 | +1.1 |
33,646 | - | xerD | NOLOHH_24435 | 0.50 | -0.9 |
33,650 | + | xerD | NOLOHH_24435 | 0.50 | -0.1 |
33,650 | + | xerD | NOLOHH_24435 | 0.50 | -0.3 |
33,650 | + | xerD | NOLOHH_24435 | 0.50 | +0.3 |
33,650 | + | xerD | NOLOHH_24435 | 0.50 | -0.9 |
33,650 | + | xerD | NOLOHH_24435 | 0.50 | -2.3 |
33,651 | - | xerD | NOLOHH_24435 | 0.50 | -0.3 |
33,651 | - | xerD | NOLOHH_24435 | 0.50 | -1.0 |
33,651 | - | xerD | NOLOHH_24435 | 0.50 | +0.7 |
33,651 | - | xerD | NOLOHH_24435 | 0.50 | +1.7 |
33,651 | - | xerD | NOLOHH_24435 | 0.50 | +1.1 |
33,653 | - | xerD | NOLOHH_24435 | 0.51 | +0.7 |
33,653 | - | xerD | NOLOHH_24435 | 0.51 | +2.7 |
33,744 | - | xerD | NOLOHH_24435 | 0.63 | +0.7 |
33,793 | + | xerD | NOLOHH_24435 | 0.70 | -0.3 |
33,829 | + | xerD | NOLOHH_24435 | 0.74 | -0.5 |
33,851 | - | xerD | NOLOHH_24435 | 0.77 | +1.3 |
33,852 | + | xerD | NOLOHH_24435 | 0.77 | +0.3 |
33,853 | - | xerD | NOLOHH_24435 | 0.78 | -0.3 |
33,853 | - | xerD | NOLOHH_24435 | 0.78 | -0.0 |
33,888 | + | xerD | NOLOHH_24435 | 0.82 | -0.3 |
33,888 | + | xerD | NOLOHH_24435 | 0.82 | +0.2 |
33,888 | + | xerD | NOLOHH_24435 | 0.82 | +2.7 |
Or see this region's nucleotide sequence