Strain Fitness in Escherichia coli ECOR27 around NOLOHH_23295

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
4,577,784	-	mngA	NOLOHH_23290	0.65	+1.0
4,577,911	+	mngA	NOLOHH_23290	0.72	-0.7
4,577,911	+	mngA	NOLOHH_23290	0.72	+0.6
4,577,911	+	mngA	NOLOHH_23290	0.72	-0.3
4,577,911	+	mngA	NOLOHH_23290	0.72	+0.3
4,577,912	-	mngA	NOLOHH_23290	0.72	-0.3
4,577,912	-	mngA	NOLOHH_23290	0.72	+1.0
4,578,047	+	mngA	NOLOHH_23290	0.79	-0.5
4,578,584	+				-1.3
4,578,613	+				-1.8
4,578,707	+	mngR	NOLOHH_23295	0.12	-0.5
4,578,721	+	mngR	NOLOHH_23295	0.14	+0.2
4,578,775	+	mngR	NOLOHH_23295	0.22	+0.3
4,578,819	+	mngR	NOLOHH_23295	0.28	-0.3
4,578,843	+	mngR	NOLOHH_23295	0.31	-3.1
4,578,899	+	mngR	NOLOHH_23295	0.39	-0.6
4,578,919	+	mngR	NOLOHH_23295	0.42	-0.3
4,578,961	+	mngR	NOLOHH_23295	0.47	+0.1
4,579,246	+	mngR	NOLOHH_23295	0.87	+1.6
4,579,246	+	mngR	NOLOHH_23295	0.87	+0.7
4,579,246	+	mngR	NOLOHH_23295	0.87	+0.2
4,579,271	+				-1.4
4,579,286	+				+0.7
4,579,301	+				+0.9
4,579,359	+				-1.4
4,579,360	-				-0.4
4,579,360	-				-0.0
4,579,426	-				+0.6
4,579,442	-				+1.3
4,579,446	-				+0.0
4,579,582	-	sucD	NOLOHH_23300	0.16	-0.8
4,579,582	-	sucD	NOLOHH_23300	0.16	-1.0
4,579,616	+	sucD	NOLOHH_23300	0.20	-2.3
4,579,839	-	sucD	NOLOHH_23300	0.45	-1.4
4,579,839	-	sucD	NOLOHH_23300	0.45	+0.3
4,579,839	-	sucD	NOLOHH_23300	0.45	+0.6
4,580,059	-	sucD	NOLOHH_23300	0.71	+0.9
4,580,096	-	sucD	NOLOHH_23300	0.75	+0.6
4,580,096	-	sucD	NOLOHH_23300	0.75	+1.1
4,580,096	-	sucD	NOLOHH_23300	0.75	-0.4
4,580,100	-	sucD	NOLOHH_23300	0.75	+0.6
4,580,100	-	sucD	NOLOHH_23300	0.75	-0.0
4,580,188	-	sucD	NOLOHH_23300	0.86	+0.7
4,580,188	-	sucD	NOLOHH_23300	0.86	-0.4
4,580,296	-				-1.0
4,580,315	-				+0.1
4,580,315	-				+0.6