Strain Fitness in Escherichia coli ECOR27 around NOLOHH_22015
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
4,333,621 | + | -0.6 | |||
4,333,621 | + | -1.6 | |||
4,333,621 | + | +0.4 | |||
4,333,622 | - | +1.0 | |||
4,333,622 | - | -0.6 | |||
4,333,622 | - | +0.2 | |||
4,333,622 | - | +1.7 | |||
4,333,622 | - | +2.4 | |||
4,336,437 | - | +0.8 | |||
4,336,584 | + | -0.4 | |||
4,336,631 | + | ycaI | NOLOHH_22020 | 0.11 | +0.4 |
4,336,654 | + | ycaI | NOLOHH_22020 | 0.12 | +0.0 |
4,336,819 | + | ycaI | NOLOHH_22020 | 0.19 | -0.3 |
4,336,819 | + | ycaI | NOLOHH_22020 | 0.19 | -0.9 |
4,336,907 | + | ycaI | NOLOHH_22020 | 0.23 | +0.2 |
4,337,149 | - | ycaI | NOLOHH_22020 | 0.34 | +0.4 |
4,337,207 | + | ycaI | NOLOHH_22020 | 0.36 | +0.4 |
4,337,208 | - | ycaI | NOLOHH_22020 | 0.36 | -1.1 |
Or see this region's nucleotide sequence