Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hisC and hisD overlap by 4 nucleotides hisD and hisG are separated by 5 nucleotides
NOLOHH_15825: hisC - histidinol-phosphate transaminase, at 3,119,722 to 3,120,792
hisC
NOLOHH_15830: hisD - Histidinol dehydrogenase, at 3,120,789 to 3,122,093
hisD
NOLOHH_15835: hisG - ATP phosphoribosyltransferase, at 3,122,099 to 3,122,998
hisG
Position (kb)
3120
3121
3122
3123 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3119.818 kb on - strand at 3119.831 kb on - strand, within hisC at 3119.860 kb on - strand, within hisC at 3119.898 kb on - strand, within hisC at 3119.961 kb on - strand, within hisC at 3120.166 kb on + strand, within hisC at 3120.233 kb on + strand, within hisC at 3120.234 kb on - strand, within hisC at 3120.234 kb on - strand, within hisC at 3120.341 kb on + strand, within hisC at 3120.341 kb on + strand, within hisC at 3120.342 kb on - strand, within hisC at 3120.382 kb on + strand, within hisC at 3120.575 kb on - strand, within hisC at 3120.734 kb on + strand at 3120.735 kb on - strand at 3120.777 kb on + strand at 3120.778 kb on - strand at 3120.804 kb on - strand at 3120.926 kb on + strand, within hisD at 3120.926 kb on + strand, within hisD at 3120.980 kb on - strand, within hisD at 3120.980 kb on - strand, within hisD at 3120.990 kb on + strand, within hisD at 3121.353 kb on - strand, within hisD at 3121.548 kb on - strand, within hisD at 3121.666 kb on - strand, within hisD at 3121.669 kb on - strand, within hisD at 3121.669 kb on - strand, within hisD at 3121.669 kb on - strand, within hisD at 3121.704 kb on - strand, within hisD at 3121.705 kb on + strand, within hisD at 3121.705 kb on + strand, within hisD at 3121.706 kb on - strand, within hisD at 3121.706 kb on - strand, within hisD at 3121.706 kb on - strand, within hisD at 3121.706 kb on - strand, within hisD at 3121.767 kb on + strand, within hisD at 3121.768 kb on - strand, within hisD at 3121.768 kb on - strand, within hisD at 3121.768 kb on - strand, within hisD at 3121.843 kb on - strand, within hisD at 3122.211 kb on - strand, within hisG at 3122.211 kb on - strand, within hisG at 3122.316 kb on + strand, within hisG at 3122.317 kb on - strand, within hisG at 3122.317 kb on - strand, within hisG at 3122.350 kb on + strand, within hisG at 3122.633 kb on + strand, within hisG at 3122.949 kb on - strand at 3123.005 kb on - strand at 3123.015 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 3,119,818 - -0.4 3,119,831 - hisC NOLOHH_15825 0.10 -0.9 3,119,860 - hisC NOLOHH_15825 0.13 +0.0 3,119,898 - hisC NOLOHH_15825 0.16 +1.0 3,119,961 - hisC NOLOHH_15825 0.22 +0.0 3,120,166 + hisC NOLOHH_15825 0.41 +1.4 3,120,233 + hisC NOLOHH_15825 0.48 -0.4 3,120,234 - hisC NOLOHH_15825 0.48 +1.1 3,120,234 - hisC NOLOHH_15825 0.48 +0.1 3,120,341 + hisC NOLOHH_15825 0.58 +0.4 3,120,341 + hisC NOLOHH_15825 0.58 +1.7 3,120,342 - hisC NOLOHH_15825 0.58 +1.2 3,120,382 + hisC NOLOHH_15825 0.62 +0.4 3,120,575 - hisC NOLOHH_15825 0.80 -0.1 3,120,734 + -0.3 3,120,735 - +0.0 3,120,777 + -0.9 3,120,778 - -0.6 3,120,804 - +0.4 3,120,926 + hisD NOLOHH_15830 0.10 +2.0 3,120,926 + hisD NOLOHH_15830 0.10 -0.8 3,120,980 - hisD NOLOHH_15830 0.15 +0.4 3,120,980 - hisD NOLOHH_15830 0.15 +0.2 3,120,990 + hisD NOLOHH_15830 0.15 -1.4 3,121,353 - hisD NOLOHH_15830 0.43 +0.4 3,121,548 - hisD NOLOHH_15830 0.58 -1.2 3,121,666 - hisD NOLOHH_15830 0.67 -0.8 3,121,669 - hisD NOLOHH_15830 0.67 -0.2 3,121,669 - hisD NOLOHH_15830 0.67 -0.2 3,121,669 - hisD NOLOHH_15830 0.67 +0.4 3,121,704 - hisD NOLOHH_15830 0.70 +0.1 3,121,705 + hisD NOLOHH_15830 0.70 +1.4 3,121,705 + hisD NOLOHH_15830 0.70 -0.2 3,121,706 - hisD NOLOHH_15830 0.70 -0.6 3,121,706 - hisD NOLOHH_15830 0.70 -2.0 3,121,706 - hisD NOLOHH_15830 0.70 -0.6 3,121,706 - hisD NOLOHH_15830 0.70 -1.9 3,121,767 + hisD NOLOHH_15830 0.75 +0.4 3,121,768 - hisD NOLOHH_15830 0.75 -0.4 3,121,768 - hisD NOLOHH_15830 0.75 -0.6 3,121,768 - hisD NOLOHH_15830 0.75 -0.6 3,121,843 - hisD NOLOHH_15830 0.81 -0.6 3,122,211 - hisG NOLOHH_15835 0.12 +1.8 3,122,211 - hisG NOLOHH_15835 0.12 +0.2 3,122,316 + hisG NOLOHH_15835 0.24 -0.1 3,122,317 - hisG NOLOHH_15835 0.24 -2.6 3,122,317 - hisG NOLOHH_15835 0.24 +1.2 3,122,350 + hisG NOLOHH_15835 0.28 -0.3 3,122,633 + hisG NOLOHH_15835 0.59 -0.6 3,122,949 - +0.2 3,123,005 - +0.4 3,123,015 - +1.0
Or see this region's nucleotide sequence