Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yfeH and yfeR are separated by 89 nucleotides yfeR and NOLOHH_13915 are separated by 38 nucleotides
NOLOHH_13905: yfeH - Putative symporter YfeH, at 2,702,615 to 2,703,613
yfeH
NOLOHH_13910: yfeR - Uncharacterized HTH-type transcriptional regulator YfeR, at 2,703,703 to 2,704,629
yfeR
NOLOHH_13915: NOLOHH_13915 - Nucleoside-specific channel-forming protein, Tsx, at 2,704,668 to 2,705,432
_13915
Position (kb)
2703
2704
2705 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2702.743 kb on + strand, within yfeH at 2702.825 kb on - strand, within yfeH at 2702.825 kb on - strand, within yfeH at 2702.876 kb on - strand, within yfeH at 2702.880 kb on - strand, within yfeH at 2702.957 kb on - strand, within yfeH at 2702.987 kb on - strand, within yfeH at 2702.987 kb on - strand, within yfeH at 2702.987 kb on - strand, within yfeH at 2702.988 kb on + strand, within yfeH at 2703.113 kb on - strand, within yfeH at 2703.113 kb on - strand, within yfeH at 2703.304 kb on - strand, within yfeH at 2703.318 kb on + strand, within yfeH at 2703.319 kb on - strand, within yfeH at 2703.402 kb on - strand, within yfeH at 2703.440 kb on - strand, within yfeH at 2703.473 kb on - strand, within yfeH at 2703.473 kb on - strand, within yfeH at 2703.725 kb on + strand at 2703.879 kb on + strand, within yfeR at 2703.879 kb on + strand, within yfeR at 2704.246 kb on + strand, within yfeR at 2704.246 kb on + strand, within yfeR at 2704.246 kb on + strand, within yfeR at 2704.246 kb on + strand, within yfeR at 2704.247 kb on - strand, within yfeR at 2704.250 kb on + strand, within yfeR at 2704.250 kb on + strand, within yfeR at 2704.265 kb on + strand, within yfeR at 2704.345 kb on - strand, within yfeR at 2704.357 kb on - strand, within yfeR at 2704.422 kb on + strand, within yfeR at 2704.568 kb on + strand at 2704.568 kb on + strand at 2704.568 kb on + strand at 2704.619 kb on - strand at 2704.625 kb on + strand at 2704.625 kb on + strand at 2704.626 kb on - strand at 2704.627 kb on + strand at 2704.627 kb on + strand at 2704.627 kb on + strand at 2704.628 kb on - strand at 2704.628 kb on - strand at 2704.691 kb on - strand at 2704.691 kb on - strand at 2704.760 kb on + strand, within NOLOHH_13915 at 2704.760 kb on + strand, within NOLOHH_13915 at 2704.834 kb on + strand, within NOLOHH_13915 at 2704.834 kb on + strand, within NOLOHH_13915 at 2704.835 kb on - strand, within NOLOHH_13915 at 2704.835 kb on - strand, within NOLOHH_13915 at 2704.835 kb on - strand, within NOLOHH_13915 at 2704.858 kb on + strand, within NOLOHH_13915 at 2704.934 kb on - strand, within NOLOHH_13915 at 2704.951 kb on + strand, within NOLOHH_13915 at 2704.968 kb on - strand, within NOLOHH_13915 at 2704.968 kb on - strand, within NOLOHH_13915 at 2704.977 kb on - strand, within NOLOHH_13915 at 2705.020 kb on + strand, within NOLOHH_13915 at 2705.043 kb on - strand, within NOLOHH_13915 at 2705.043 kb on - strand, within NOLOHH_13915 at 2705.130 kb on - strand, within NOLOHH_13915 at 2705.138 kb on + strand, within NOLOHH_13915 at 2705.395 kb on - strand at 2705.397 kb on - strand at 2705.437 kb on + strand at 2705.566 kb on + strand at 2705.617 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 2,702,743 + yfeH NOLOHH_13905 0.13 +0.4 2,702,825 - yfeH NOLOHH_13905 0.21 -1.5 2,702,825 - yfeH NOLOHH_13905 0.21 -1.6 2,702,876 - yfeH NOLOHH_13905 0.26 +0.1 2,702,880 - yfeH NOLOHH_13905 0.27 +1.1 2,702,957 - yfeH NOLOHH_13905 0.34 +1.4 2,702,987 - yfeH NOLOHH_13905 0.37 +0.3 2,702,987 - yfeH NOLOHH_13905 0.37 +2.4 2,702,987 - yfeH NOLOHH_13905 0.37 -1.2 2,702,988 + yfeH NOLOHH_13905 0.37 +0.4 2,703,113 - yfeH NOLOHH_13905 0.50 +0.1 2,703,113 - yfeH NOLOHH_13905 0.50 -0.1 2,703,304 - yfeH NOLOHH_13905 0.69 -1.0 2,703,318 + yfeH NOLOHH_13905 0.70 -0.0 2,703,319 - yfeH NOLOHH_13905 0.70 +0.1 2,703,402 - yfeH NOLOHH_13905 0.79 +0.2 2,703,440 - yfeH NOLOHH_13905 0.83 -0.0 2,703,473 - yfeH NOLOHH_13905 0.86 -1.9 2,703,473 - yfeH NOLOHH_13905 0.86 -1.6 2,703,725 + -0.5 2,703,879 + yfeR NOLOHH_13910 0.19 +2.0 2,703,879 + yfeR NOLOHH_13910 0.19 +0.7 2,704,246 + yfeR NOLOHH_13910 0.59 +0.4 2,704,246 + yfeR NOLOHH_13910 0.59 -0.6 2,704,246 + yfeR NOLOHH_13910 0.59 +0.8 2,704,246 + yfeR NOLOHH_13910 0.59 -0.3 2,704,247 - yfeR NOLOHH_13910 0.59 -0.0 2,704,250 + yfeR NOLOHH_13910 0.59 +1.4 2,704,250 + yfeR NOLOHH_13910 0.59 +0.4 2,704,265 + yfeR NOLOHH_13910 0.61 +0.1 2,704,345 - yfeR NOLOHH_13910 0.69 -0.2 2,704,357 - yfeR NOLOHH_13910 0.71 -1.4 2,704,422 + yfeR NOLOHH_13910 0.78 +1.4 2,704,568 + -0.0 2,704,568 + +0.4 2,704,568 + -1.2 2,704,619 - +0.7 2,704,625 + +0.4 2,704,625 + +1.1 2,704,626 - -0.6 2,704,627 + -1.2 2,704,627 + +2.0 2,704,627 + +0.2 2,704,628 - +0.4 2,704,628 - +1.0 2,704,691 - -0.2 2,704,691 - -0.1 2,704,760 + NOLOHH_13915 0.12 +1.4 2,704,760 + NOLOHH_13915 0.12 -1.6 2,704,834 + NOLOHH_13915 0.22 -0.9 2,704,834 + NOLOHH_13915 0.22 +0.1 2,704,835 - NOLOHH_13915 0.22 -0.6 2,704,835 - NOLOHH_13915 0.22 -1.2 2,704,835 - NOLOHH_13915 0.22 -1.3 2,704,858 + NOLOHH_13915 0.25 +0.7 2,704,934 - NOLOHH_13915 0.35 +1.1 2,704,951 + NOLOHH_13915 0.37 +1.4 2,704,968 - NOLOHH_13915 0.39 +1.1 2,704,968 - NOLOHH_13915 0.39 +0.7 2,704,977 - NOLOHH_13915 0.40 +0.4 2,705,020 + NOLOHH_13915 0.46 +0.1 2,705,043 - NOLOHH_13915 0.49 -2.1 2,705,043 - NOLOHH_13915 0.49 +0.4 2,705,130 - NOLOHH_13915 0.60 +0.1 2,705,138 + NOLOHH_13915 0.61 -0.2 2,705,395 - +0.4 2,705,397 - +0.2 2,705,437 + +1.0 2,705,566 + +1.0 2,705,617 + +1.1
Or see this region's nucleotide sequence