Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12010

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,324,925	+	gcvA	NOLOHH_12000	0.38	-1.4
2,324,982	+	gcvA	NOLOHH_12000	0.44	-0.4
2,325,011	+	gcvA	NOLOHH_12000	0.47	-1.1
2,325,067	+	gcvA	NOLOHH_12000	0.53	-1.9
2,325,152	+	gcvA	NOLOHH_12000	0.63	+0.2
2,325,152	+	gcvA	NOLOHH_12000	0.63	-0.7
2,325,152	+	gcvA	NOLOHH_12000	0.63	+0.4
2,325,152	+	gcvA	NOLOHH_12000	0.63	-1.2
2,325,152	+	gcvA	NOLOHH_12000	0.63	-0.1
2,325,184	+	gcvA	NOLOHH_12000	0.66	-2.8
2,325,184	+	gcvA	NOLOHH_12000	0.66	-1.2
2,325,184	+	gcvA	NOLOHH_12000	0.66	-0.8
2,325,184	+	gcvA	NOLOHH_12000	0.66	-0.6
2,325,184	+	gcvA	NOLOHH_12000	0.66	-1.7
2,325,185	-	gcvA	NOLOHH_12000	0.66	-0.1
2,325,186	+	gcvA	NOLOHH_12000	0.66	+0.7
2,325,186	+	gcvA	NOLOHH_12000	0.66	-0.4
2,325,186	+	gcvA	NOLOHH_12000	0.66	+0.6
2,325,297	+	gcvA	NOLOHH_12000	0.78	-1.2
2,325,297	+	gcvA	NOLOHH_12000	0.78	-0.2
2,325,348	+	gcvA	NOLOHH_12000	0.84	-0.4
2,325,414	+				+0.7
2,325,493	+				+0.3
2,325,493	+				+1.4
2,325,493	+				+0.6
2,325,499	-				-0.3
2,325,528	+				-0.3
2,325,528	+				-0.6
2,325,528	+				+0.7
2,325,528	+				-0.3
2,325,596	+	ygdD	NOLOHH_12005	0.21	+0.3
2,325,601	-	ygdD	NOLOHH_12005	0.22	+0.6
2,325,677	+	ygdD	NOLOHH_12005	0.41	+1.1
2,325,677	+	ygdD	NOLOHH_12005	0.41	+0.8
2,325,721	+	ygdD	NOLOHH_12005	0.52	-0.7
2,325,863	+	ygdD	NOLOHH_12005	0.88	+1.3
2,325,863	+	ygdD	NOLOHH_12005	0.88	+0.7
2,325,863	+	ygdD	NOLOHH_12005	0.88	-0.0
2,325,896	+				-0.2
2,325,907	+				-1.9
2,325,908	-				-0.6
2,325,915	+				-0.4
2,325,915	+				+0.0
2,325,915	+				-0.4
2,325,915	+				-0.0
2,325,915	+				+0.4
2,325,915	+				+0.3
2,325,916	-				+1.7
2,325,916	-				+0.5
2,325,916	-				+0.4
2,325,916	-				-1.6
2,326,022	+	rlmM	NOLOHH_12010	0.11	+0.4
2,326,032	-	rlmM	NOLOHH_12010	0.12	+1.7
2,326,156	+	rlmM	NOLOHH_12010	0.23	-0.2
2,326,156	+	rlmM	NOLOHH_12010	0.23	+0.7
2,326,156	+	rlmM	NOLOHH_12010	0.23	-1.5
2,326,157	-	rlmM	NOLOHH_12010	0.23	+0.4
2,326,157	-	rlmM	NOLOHH_12010	0.23	-0.3
2,326,188	+	rlmM	NOLOHH_12010	0.26	-0.9
2,326,188	+	rlmM	NOLOHH_12010	0.26	-1.9
2,326,191	+	rlmM	NOLOHH_12010	0.26	+1.3
2,326,248	+	rlmM	NOLOHH_12010	0.31	-0.5
2,326,271	-	rlmM	NOLOHH_12010	0.34	+0.1
2,326,320	-	rlmM	NOLOHH_12010	0.38	+0.4
2,326,320	-	rlmM	NOLOHH_12010	0.38	+1.4
2,326,350	+	rlmM	NOLOHH_12010	0.41	-0.6
2,326,350	+	rlmM	NOLOHH_12010	0.41	-1.0
2,326,350	+	rlmM	NOLOHH_12010	0.41	+0.5
2,326,350	+	rlmM	NOLOHH_12010	0.41	+0.8
2,326,350	+	rlmM	NOLOHH_12010	0.41	+2.0
2,326,376	+	rlmM	NOLOHH_12010	0.43	-0.6
2,326,377	-	rlmM	NOLOHH_12010	0.43	-1.5
2,326,391	+	rlmM	NOLOHH_12010	0.44	-1.4
2,326,391	+	rlmM	NOLOHH_12010	0.44	+0.6
2,326,391	+	rlmM	NOLOHH_12010	0.44	-1.0
2,326,391	+	rlmM	NOLOHH_12010	0.44	+0.0
2,326,403	-	rlmM	NOLOHH_12010	0.46	-0.7
2,326,415	+	rlmM	NOLOHH_12010	0.47	-1.6
2,326,415	+	rlmM	NOLOHH_12010	0.47	-1.0
2,326,415	+	rlmM	NOLOHH_12010	0.47	-0.3
2,326,415	+	rlmM	NOLOHH_12010	0.47	+0.1
2,326,415	+	rlmM	NOLOHH_12010	0.47	+0.7
2,326,415	+	rlmM	NOLOHH_12010	0.47	+0.1
2,326,416	-	rlmM	NOLOHH_12010	0.47	-1.3
2,326,416	-	rlmM	NOLOHH_12010	0.47	-0.4
2,326,416	-	rlmM	NOLOHH_12010	0.47	-0.8
2,326,417	+	rlmM	NOLOHH_12010	0.47	+1.7
2,326,417	+	rlmM	NOLOHH_12010	0.47	-0.9
2,326,418	-	rlmM	NOLOHH_12010	0.47	+0.4
2,326,498	+	rlmM	NOLOHH_12010	0.54	+0.3
2,326,498	+	rlmM	NOLOHH_12010	0.54	+0.1
2,326,554	+	rlmM	NOLOHH_12010	0.59	-0.3
2,326,554	+	rlmM	NOLOHH_12010	0.59	+0.4
2,326,580	+	rlmM	NOLOHH_12010	0.62	+0.7
2,326,580	+	rlmM	NOLOHH_12010	0.62	+0.4
2,326,581	-	rlmM	NOLOHH_12010	0.62	-0.8
2,326,581	-	rlmM	NOLOHH_12010	0.62	-0.6
2,326,610	+	rlmM	NOLOHH_12010	0.64	+0.4
2,326,711	+	rlmM	NOLOHH_12010	0.73	-1.6
2,326,711	+	rlmM	NOLOHH_12010	0.73	+0.0
2,326,712	-	rlmM	NOLOHH_12010	0.74	-0.1
2,326,733	-	rlmM	NOLOHH_12010	0.75	+0.1
2,326,865	+	rlmM	NOLOHH_12010	0.87	-1.9
2,326,865	+	rlmM	NOLOHH_12010	0.87	+2.2
2,326,865	+	rlmM	NOLOHH_12010	0.87	+0.2
2,326,896	+				+0.1
2,326,896	+				-0.6
2,326,896	+				+0.3
2,327,090	+				+0.1
2,327,141	+	fucR	NOLOHH_12015	0.13	-0.2
2,327,153	+	fucR	NOLOHH_12015	0.15	-1.3
2,327,154	-	fucR	NOLOHH_12015	0.15	-0.2
2,327,154	-	fucR	NOLOHH_12015	0.15	-0.0
2,327,187	+	fucR	NOLOHH_12015	0.19	+0.4
2,327,188	-	fucR	NOLOHH_12015	0.19	+0.0
2,327,188	-	fucR	NOLOHH_12015	0.19	-0.6
2,327,203	+	fucR	NOLOHH_12015	0.21	-1.2
2,327,271	-	fucR	NOLOHH_12015	0.31	+0.8
2,327,294	+	fucR	NOLOHH_12015	0.34	-0.0
2,327,324	-	fucR	NOLOHH_12015	0.38	+0.2
2,327,324	-	fucR	NOLOHH_12015	0.38	+0.1
2,327,324	-	fucR	NOLOHH_12015	0.38	-0.7
2,327,332	+	fucR	NOLOHH_12015	0.39	-0.1
2,327,332	+	fucR	NOLOHH_12015	0.39	+0.4
2,327,333	-	fucR	NOLOHH_12015	0.39	+0.7
2,327,333	-	fucR	NOLOHH_12015	0.39	+0.6
2,327,459	-	fucR	NOLOHH_12015	0.56	+1.3
2,327,481	+	fucR	NOLOHH_12015	0.59	-1.4
2,327,481	+	fucR	NOLOHH_12015	0.59	-0.6
2,327,540	+	fucR	NOLOHH_12015	0.67	-0.6
2,327,548	+	fucR	NOLOHH_12015	0.69	+1.0
2,327,606	+	fucR	NOLOHH_12015	0.77	-0.6
2,327,608	+	fucR	NOLOHH_12015	0.77	-1.2
2,327,608	+	fucR	NOLOHH_12015	0.77	+0.6
2,327,608	+	fucR	NOLOHH_12015	0.77	+2.0
2,327,609	-	fucR	NOLOHH_12015	0.77	+2.2
2,327,609	-	fucR	NOLOHH_12015	0.77	-0.4
2,327,609	-	fucR	NOLOHH_12015	0.77	+0.4
2,327,612	+	fucR	NOLOHH_12015	0.77	+0.1
2,327,695	-	fucR	NOLOHH_12015	0.89	-0.0
2,327,729	+				-1.2
2,327,777	+				-1.8
2,327,777	+				+1.0
2,327,781	+				-2.8
2,327,782	-				-1.2
2,327,836	+				+0.8
2,327,873	-				+1.0
2,327,973	+	fucU	NOLOHH_12020	0.33	+0.9
2,327,974	-	fucU	NOLOHH_12020	0.33	-0.4
2,327,988	-	fucU	NOLOHH_12020	0.36	+1.4
2,327,988	-	fucU	NOLOHH_12020	0.36	+0.2