Strain Fitness in Escherichia coli ECOR27 around NOLOHH_11120

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,151,325	-	hemW	NOLOHH_11105	0.90	-1.2
2,151,411	+				+1.4
2,151,440	+				+0.5
2,151,441	-				+1.2
2,151,441	-				+0.1
2,151,445	-				-1.9
2,151,541	-	rdgB	NOLOHH_11110	0.18	-1.2
2,151,656	-	rdgB	NOLOHH_11110	0.38	-0.6
2,151,656	-	rdgB	NOLOHH_11110	0.38	+0.1
2,151,656	-	rdgB	NOLOHH_11110	0.38	-0.1
2,151,656	-	rdgB	NOLOHH_11110	0.38	+0.4
2,151,657	+	rdgB	NOLOHH_11110	0.38	-0.3
2,151,657	+	rdgB	NOLOHH_11110	0.38	+0.8
2,151,657	+	rdgB	NOLOHH_11110	0.38	+2.4
2,151,657	+	rdgB	NOLOHH_11110	0.38	-0.9
2,151,658	-	rdgB	NOLOHH_11110	0.38	+0.4
2,151,775	+	rdgB	NOLOHH_11110	0.58	+1.1
2,151,805	-	rdgB	NOLOHH_11110	0.63	-1.3
2,152,026	-				+1.6
2,152,030	+				-0.0
2,152,031	-				-0.2
2,152,034	+				+1.4
2,152,035	-				+0.4
2,152,035	-				-0.2
2,152,035	-				-0.6
2,152,035	-				+0.6
2,152,035	-				-1.6
2,152,038	+				+1.4
2,152,039	-				-0.0
2,152,039	-				-0.3
2,152,043	-				+0.4
2,152,087	-	yggU	NOLOHH_11115	0.19	+1.4
2,152,123	+	yggU	NOLOHH_11115	0.31	+1.9
2,152,222	-	yggU	NOLOHH_11115	0.65	+0.3
2,152,238	-	yggU	NOLOHH_11115	0.70	+0.4
2,152,275	+	yggU	NOLOHH_11115	0.83	+0.4
2,152,276	-	yggU	NOLOHH_11115	0.84	-1.4
2,152,277	+	yggU	NOLOHH_11115	0.84	-1.4
2,152,277	+	yggU	NOLOHH_11115	0.84	-0.0
2,152,278	-	yggU	NOLOHH_11115	0.84	-1.0
2,152,278	-	yggU	NOLOHH_11115	0.84	+0.6
2,152,278	-	yggU	NOLOHH_11115	0.84	+0.2
2,152,278	-	yggU	NOLOHH_11115	0.84	+1.6
2,152,285	+	yggU	NOLOHH_11115	0.87	+0.4
2,152,286	-	yggU	NOLOHH_11115	0.87	-0.5
2,152,306	-				-0.7
2,152,369	-				-0.0
2,152,372	-				+1.4
2,152,400	-	yggT	NOLOHH_11120	0.14	+0.6
2,152,918	-				-1.2
2,152,918	-				+0.4
2,153,055	-	yggS	NOLOHH_11125	0.21	+0.7
2,153,087	+	yggS	NOLOHH_11125	0.26	-1.9
2,153,087	+	yggS	NOLOHH_11125	0.26	-1.4
2,153,088	-	yggS	NOLOHH_11125	0.26	-1.4
2,153,088	-	yggS	NOLOHH_11125	0.26	+0.0
2,153,088	-	yggS	NOLOHH_11125	0.26	-0.1
2,153,092	-	yggS	NOLOHH_11125	0.27	-2.6
2,153,092	-	yggS	NOLOHH_11125	0.27	+1.4
2,153,092	-	yggS	NOLOHH_11125	0.27	-1.4
2,153,092	-	yggS	NOLOHH_11125	0.27	-0.6
2,153,201	-	yggS	NOLOHH_11125	0.42	-0.2
2,153,215	+	yggS	NOLOHH_11125	0.44	-0.8
2,153,215	+	yggS	NOLOHH_11125	0.44	-0.3
2,153,305	+	yggS	NOLOHH_11125	0.57	+0.7
2,153,344	+	yggS	NOLOHH_11125	0.62	+1.1
2,153,344	+	yggS	NOLOHH_11125	0.62	+0.8
2,153,379	-	yggS	NOLOHH_11125	0.67	-0.8
2,153,416	+	yggS	NOLOHH_11125	0.73	-0.9
2,153,421	-	yggS	NOLOHH_11125	0.73	+3.0
2,153,437	-	yggS	NOLOHH_11125	0.76	-0.3
2,153,521	+	yggS	NOLOHH_11125	0.88	-1.4
2,153,600	-				+0.1
2,153,600	-				+0.9
2,153,622	+				-0.3
2,153,622	+				-0.9
2,153,622	+				+0.4
2,153,622	+				+0.5
2,153,623	-				+0.1
2,153,623	-				+1.4
2,153,652	+				+1.1
2,153,658	-				+0.9
2,153,658	-				-0.4
2,153,678	+				-0.2
2,153,678	+				+1.0
2,153,679	-				-1.2
2,153,766	-	yggR	NOLOHH_11130	0.14	-0.1
2,153,802	-	yggR	NOLOHH_11130	0.18	-0.3