Strain Fitness in Escherichia coli ECOR27 around NOLOHH_10015

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,927,531	-	yraQ	NOLOHH_10010	0.15	-0.8
1,927,577	-	yraQ	NOLOHH_10010	0.20	+0.4
1,927,577	-	yraQ	NOLOHH_10010	0.20	-0.3
1,927,588	+	yraQ	NOLOHH_10010	0.21	+0.1
1,927,589	-	yraQ	NOLOHH_10010	0.21	-0.5
1,927,746	+	yraQ	NOLOHH_10010	0.36	+2.2
1,927,746	+	yraQ	NOLOHH_10010	0.36	+0.3
1,927,747	-	yraQ	NOLOHH_10010	0.36	-0.6
1,927,997	+	yraQ	NOLOHH_10010	0.60	-0.4
1,927,997	+	yraQ	NOLOHH_10010	0.60	-0.4
1,928,075	-	yraQ	NOLOHH_10010	0.68	-1.2
1,928,225	+	yraQ	NOLOHH_10010	0.82	+0.1
1,928,226	-	yraQ	NOLOHH_10010	0.82	+0.2
1,928,226	-	yraQ	NOLOHH_10010	0.82	+0.3
1,928,313	+				+1.9
1,928,313	+				+2.5
1,928,314	-				-0.5
1,928,314	-				+1.6
1,928,314	-				+0.9
1,928,345	+				-0.0
1,928,346	-				+0.6
1,928,459	+				+1.4
1,928,459	+				-0.2
1,928,460	-				+0.2
1,928,514	+				-0.3
1,928,514	+				-0.5
1,928,527	+				-1.2
1,928,527	+				-0.6
1,928,527	+				+0.4
1,928,532	-				+0.6
1,928,535	-				+0.4
1,928,541	-				-0.5
1,928,562	+				+0.4
1,928,563	-				-0.9
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.1
1,928,779	+	dolP	NOLOHH_10015	0.44	+0.8
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.4
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.3
1,928,779	+	dolP	NOLOHH_10015	0.44	-0.5
1,928,779	+	dolP	NOLOHH_10015	0.44	-1.6
1,928,780	-	dolP	NOLOHH_10015	0.44	+0.7
1,928,780	-	dolP	NOLOHH_10015	0.44	-0.6
1,928,780	-	dolP	NOLOHH_10015	0.44	-0.1
1,928,780	-	dolP	NOLOHH_10015	0.44	+1.4
1,928,800	-	dolP	NOLOHH_10015	0.48	-0.8
1,928,879	-	dolP	NOLOHH_10015	0.61	+0.4
1,928,891	+	dolP	NOLOHH_10015	0.63	-1.5
1,928,891	+	dolP	NOLOHH_10015	0.63	+1.2
1,928,892	-	dolP	NOLOHH_10015	0.64	+0.7
1,928,910	-	dolP	NOLOHH_10015	0.67	+0.3
1,928,958	-	dolP	NOLOHH_10015	0.75	+0.1
1,929,072	-				-0.1
1,929,072	-				-1.2
1,929,104	-				+1.1
1,929,104	-				-0.8
1,929,104	-				-1.6
1,929,113	-				-0.3
1,929,177	-	diaA	NOLOHH_10020	0.11	+1.2
1,929,177	-	diaA	NOLOHH_10020	0.11	-0.4
1,929,177	-	diaA	NOLOHH_10020	0.11	-1.1
1,929,201	-	diaA	NOLOHH_10020	0.15	-0.2
1,929,294	-	diaA	NOLOHH_10020	0.31	-0.4
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.2
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.6
1,929,366	+	diaA	NOLOHH_10020	0.43	+1.4
1,929,366	+	diaA	NOLOHH_10020	0.43	+0.4
1,929,366	+	diaA	NOLOHH_10020	0.43	-0.1
1,929,366	+	diaA	NOLOHH_10020	0.43	-0.6
1,929,366	+	diaA	NOLOHH_10020	0.43	+0.0
1,929,366	+	diaA	NOLOHH_10020	0.43	-1.6
1,929,367	-	diaA	NOLOHH_10020	0.43	-1.6
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.9
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.9
1,929,367	-	diaA	NOLOHH_10020	0.43	+2.7
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.8
1,929,367	-	diaA	NOLOHH_10020	0.43	-1.8
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.6
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.1
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.1
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.1
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.5
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.0
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.2
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.6
1,929,367	-	diaA	NOLOHH_10020	0.43	+1.7
1,929,367	-	diaA	NOLOHH_10020	0.43	-0.4
1,929,367	-	diaA	NOLOHH_10020	0.43	+0.5
1,929,406	+	diaA	NOLOHH_10020	0.50	+0.9
1,929,406	+	diaA	NOLOHH_10020	0.50	+0.2
1,929,406	+	diaA	NOLOHH_10020	0.50	+1.2
1,929,407	-	diaA	NOLOHH_10020	0.50	+0.2
1,929,420	+	diaA	NOLOHH_10020	0.52	-1.1
1,929,421	-	diaA	NOLOHH_10020	0.52	+1.4
1,929,421	-	diaA	NOLOHH_10020	0.52	-0.4
1,929,421	-	diaA	NOLOHH_10020	0.52	-1.3
1,929,421	-	diaA	NOLOHH_10020	0.52	-1.6
1,929,421	-	diaA	NOLOHH_10020	0.52	+0.4
1,929,455	+	diaA	NOLOHH_10020	0.58	+1.9
1,929,462	-	diaA	NOLOHH_10020	0.59	+1.7
1,929,465	+	diaA	NOLOHH_10020	0.60	-1.6
1,929,466	-	diaA	NOLOHH_10020	0.60	+0.4
1,929,466	-	diaA	NOLOHH_10020	0.60	-0.1
1,929,480	+	diaA	NOLOHH_10020	0.62	-0.0
1,929,481	-	diaA	NOLOHH_10020	0.63	-0.4
1,929,481	-	diaA	NOLOHH_10020	0.63	+0.9
1,929,705	-				+2.4
1,929,711	+				+0.7
1,929,712	-				-0.0
1,929,718	+				-0.5
1,929,719	-				-0.5
1,929,719	-				+0.1
1,929,722	+				+0.4
1,929,722	+				+0.9
1,929,723	-				-1.1
1,929,747	+				-0.3
1,929,853	+	yraN	NOLOHH_10025	0.33	-0.4
1,929,899	+	yraN	NOLOHH_10025	0.45	-0.6
1,929,959	-	yraN	NOLOHH_10025	0.60	-0.6
1,930,042	+	yraN	NOLOHH_10025	0.81	+0.5
1,930,042	+	yraN	NOLOHH_10025	0.81	+1.1
1,930,043	-	yraN	NOLOHH_10025	0.81	+0.2
1,930,090	-				+0.6