Strain Fitness in Escherichia coli ECOR27 around NOLOHH_09470

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,820,332	+	yhdJ	NOLOHH_09460	0.35	+0.3
1,820,333	-	yhdJ	NOLOHH_09460	0.35	+0.7
1,820,398	+	yhdJ	NOLOHH_09460	0.42	-0.8
1,820,399	-	yhdJ	NOLOHH_09460	0.43	-0.4
1,820,399	-	yhdJ	NOLOHH_09460	0.43	-0.1
1,820,399	-	yhdJ	NOLOHH_09460	0.43	+0.3
1,820,468	+	yhdJ	NOLOHH_09460	0.50	+1.7
1,820,468	+	yhdJ	NOLOHH_09460	0.50	-0.7
1,820,527	+	yhdJ	NOLOHH_09460	0.57	+0.5
1,820,527	+	yhdJ	NOLOHH_09460	0.57	+0.1
1,820,527	+	yhdJ	NOLOHH_09460	0.57	-0.7
1,820,527	+	yhdJ	NOLOHH_09460	0.57	-1.5
1,820,528	-	yhdJ	NOLOHH_09460	0.57	+2.1
1,820,528	-	yhdJ	NOLOHH_09460	0.57	+0.0
1,820,539	+	yhdJ	NOLOHH_09460	0.58	+0.5
1,820,556	+	yhdJ	NOLOHH_09460	0.60	+0.1
1,820,600	+	yhdJ	NOLOHH_09460	0.65	+0.0
1,820,601	-	yhdJ	NOLOHH_09460	0.65	-1.1
1,820,654	+	yhdJ	NOLOHH_09460	0.71	-0.0
1,820,654	+	yhdJ	NOLOHH_09460	0.71	+0.5
1,820,655	-	yhdJ	NOLOHH_09460	0.72	+0.3
1,820,655	-	yhdJ	NOLOHH_09460	0.72	-0.3
1,820,659	+	yhdJ	NOLOHH_09460	0.72	-0.3
1,820,659	+	yhdJ	NOLOHH_09460	0.72	-0.0
1,820,659	+	yhdJ	NOLOHH_09460	0.72	-1.3
1,820,659	+	yhdJ	NOLOHH_09460	0.72	-0.4
1,820,659	+	yhdJ	NOLOHH_09460	0.72	-0.6
1,820,660	-	yhdJ	NOLOHH_09460	0.72	+0.3
1,820,660	-	yhdJ	NOLOHH_09460	0.72	+0.1
1,820,660	-	yhdJ	NOLOHH_09460	0.72	+1.5
1,820,778	-	yhdJ	NOLOHH_09460	0.85	-0.4
1,820,779	+	yhdJ	NOLOHH_09460	0.86	+0.0
1,820,779	+	yhdJ	NOLOHH_09460	0.86	+0.3
1,820,779	+	yhdJ	NOLOHH_09460	0.86	+0.4
1,820,779	+	yhdJ	NOLOHH_09460	0.86	-0.7
1,820,780	-	yhdJ	NOLOHH_09460	0.86	+0.6
1,820,821	-				-0.7
1,820,828	+				+0.3
1,820,864	+				+0.6
1,820,873	+				-1.0
1,821,084	-	fis	NOLOHH_09465	0.31	+0.3
1,821,116	-	fis	NOLOHH_09465	0.42	-0.7
1,821,260	-				-1.3
1,821,289	-				-0.7
1,821,306	-				-0.7
1,821,334	-				-1.7
1,821,334	-				-2.5
1,821,424	-	dusB	NOLOHH_09470	0.11	-2.0
1,821,424	-	dusB	NOLOHH_09470	0.11	-2.4
1,821,440	-	dusB	NOLOHH_09470	0.13	-2.5
1,821,440	-	dusB	NOLOHH_09470	0.13	-2.8
1,821,472	-	dusB	NOLOHH_09470	0.16	-1.7
1,821,472	-	dusB	NOLOHH_09470	0.16	-3.5
1,821,561	+	dusB	NOLOHH_09470	0.26	-1.3
1,821,634	+	dusB	NOLOHH_09470	0.33	-0.7
1,821,635	-	dusB	NOLOHH_09470	0.33	-0.8
1,821,635	-	dusB	NOLOHH_09470	0.33	-2.1
1,821,635	-	dusB	NOLOHH_09470	0.33	-0.7
1,821,635	-	dusB	NOLOHH_09470	0.33	-0.7
1,821,636	+	dusB	NOLOHH_09470	0.33	-2.7
1,821,636	+	dusB	NOLOHH_09470	0.33	-1.3
1,821,637	-	dusB	NOLOHH_09470	0.33	-2.0
1,821,712	+	dusB	NOLOHH_09470	0.41	+0.3
1,821,713	-	dusB	NOLOHH_09470	0.41	-1.1
1,821,725	-	dusB	NOLOHH_09470	0.43	-0.3
1,821,725	-	dusB	NOLOHH_09470	0.43	-1.4
1,821,733	-	dusB	NOLOHH_09470	0.43	-1.5
1,821,916	+	dusB	NOLOHH_09470	0.62	-1.7
1,821,989	-	dusB	NOLOHH_09470	0.70	-1.7
1,822,000	+	dusB	NOLOHH_09470	0.71	-0.7
1,822,025	-	dusB	NOLOHH_09470	0.74	-1.8
1,822,025	-	dusB	NOLOHH_09470	0.74	-3.0
1,822,027	+	dusB	NOLOHH_09470	0.74	-0.7
1,822,028	-	dusB	NOLOHH_09470	0.74	-1.8
1,822,028	-	dusB	NOLOHH_09470	0.74	-0.7
1,822,028	-	dusB	NOLOHH_09470	0.74	-1.0
1,822,028	-	dusB	NOLOHH_09470	0.74	+0.3
1,822,028	-	dusB	NOLOHH_09470	0.74	-0.7
1,822,112	+	dusB	NOLOHH_09470	0.83	-1.3
1,822,264	-				-1.0
1,822,285	-				+0.3
1,822,298	-				-1.6
1,822,318	+				-0.7
1,822,318	+				-1.3
1,822,319	-				-3.3
1,822,320	+				-1.7
1,822,320	+				-0.7
1,822,321	-				-1.7
1,822,321	-				-1.7
1,822,323	+				+0.3
1,822,480	-				-1.2
1,822,480	-				-0.2
1,822,547	+				+0.4
1,822,616	+				-0.1
1,822,681	+				-0.5
1,822,681	+				-1.9
1,822,682	-				+0.9
1,822,682	-				+0.1
1,822,852	+	prmA	NOLOHH_09475	0.28	+0.1
1,822,853	-	prmA	NOLOHH_09475	0.28	+0.3
1,822,853	-	prmA	NOLOHH_09475	0.28	+0.2
1,822,853	-	prmA	NOLOHH_09475	0.28	-0.4
1,822,880	+	prmA	NOLOHH_09475	0.31	+0.6
1,822,931	+	prmA	NOLOHH_09475	0.37	-2.0
1,822,932	-	prmA	NOLOHH_09475	0.37	-0.5
1,823,019	+	prmA	NOLOHH_09475	0.47	-0.5
1,823,020	-	prmA	NOLOHH_09475	0.47	-0.2
1,823,075	+	prmA	NOLOHH_09475	0.53	-0.1
1,823,097	+	prmA	NOLOHH_09475	0.55	+1.1
1,823,097	+	prmA	NOLOHH_09475	0.55	+1.9
1,823,097	+	prmA	NOLOHH_09475	0.55	-0.3
1,823,098	-	prmA	NOLOHH_09475	0.56	+1.2
1,823,220	+	prmA	NOLOHH_09475	0.69	-1.7
1,823,220	+	prmA	NOLOHH_09475	0.69	+1.0
1,823,221	-	prmA	NOLOHH_09475	0.70	-0.6
1,823,221	-	prmA	NOLOHH_09475	0.70	-0.7