Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hemC and hemD overlap by 4 nucleotides hemD and hemX are separated by 21 nucleotides
NOLOHH_06595: hemC - hydroxymethylbilane synthase, at 1,245,352 to 1,246,314
hemC
NOLOHH_06600: hemD - uroporphyrinogen-III synthase, at 1,246,311 to 1,247,051
hemD
NOLOHH_06605: hemX - uroporphyrinogen-III C-methyltransferase, at 1,247,073 to 1,248,308
hemX
Position (kb)
1246
1247
1248 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1245.337 kb on + strand at 1246.291 kb on + strand at 1246.291 kb on + strand at 1247.035 kb on + strand at 1247.044 kb on + strand at 1247.044 kb on + strand at 1247.044 kb on + strand at 1247.045 kb on - strand at 1247.045 kb on - strand at 1247.045 kb on - strand at 1247.049 kb on + strand at 1247.050 kb on - strand at 1247.050 kb on - strand at 1247.050 kb on - strand at 1247.058 kb on + strand at 1247.059 kb on - strand at 1247.165 kb on + strand at 1247.166 kb on - strand at 1247.175 kb on - strand at 1247.235 kb on + strand, within hemX at 1247.235 kb on + strand, within hemX at 1247.235 kb on + strand, within hemX at 1247.235 kb on + strand, within hemX at 1247.351 kb on + strand, within hemX at 1247.352 kb on - strand, within hemX at 1247.354 kb on + strand, within hemX at 1247.355 kb on - strand, within hemX at 1247.355 kb on - strand, within hemX at 1247.375 kb on + strand, within hemX at 1247.375 kb on + strand, within hemX at 1247.462 kb on + strand, within hemX at 1247.625 kb on - strand, within hemX at 1247.802 kb on - strand, within hemX at 1247.831 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.904 kb on + strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.905 kb on - strand, within hemX at 1247.918 kb on + strand, within hemX at 1247.953 kb on + strand, within hemX at 1247.954 kb on - strand, within hemX at 1247.976 kb on + strand, within hemX at 1247.976 kb on + strand, within hemX at 1247.977 kb on - strand, within hemX at 1247.977 kb on - strand, within hemX at 1248.018 kb on + strand, within hemX at 1248.018 kb on + strand, within hemX at 1248.019 kb on - strand, within hemX at 1248.019 kb on - strand, within hemX at 1248.021 kb on + strand, within hemX at 1248.021 kb on + strand, within hemX at 1248.022 kb on - strand, within hemX at 1248.022 kb on - strand, within hemX
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,245,337 + +0.2 1,246,291 + +0.5 1,246,291 + -1.1 1,247,035 + -0.6 1,247,044 + +0.7 1,247,044 + +0.7 1,247,044 + -0.5 1,247,045 - +0.2 1,247,045 - +0.6 1,247,045 - +0.2 1,247,049 + -0.9 1,247,050 - -1.0 1,247,050 - -1.7 1,247,050 - +0.2 1,247,058 + -1.4 1,247,059 - -0.2 1,247,165 + +1.6 1,247,166 - -0.0 1,247,175 - +0.7 1,247,235 + hemX NOLOHH_06605 0.13 -0.0 1,247,235 + hemX NOLOHH_06605 0.13 +0.1 1,247,235 + hemX NOLOHH_06605 0.13 -0.2 1,247,235 + hemX NOLOHH_06605 0.13 +0.4 1,247,351 + hemX NOLOHH_06605 0.22 +0.2 1,247,352 - hemX NOLOHH_06605 0.23 -2.9 1,247,354 + hemX NOLOHH_06605 0.23 +1.5 1,247,355 - hemX NOLOHH_06605 0.23 -0.8 1,247,355 - hemX NOLOHH_06605 0.23 +0.2 1,247,375 + hemX NOLOHH_06605 0.24 -0.8 1,247,375 + hemX NOLOHH_06605 0.24 -0.3 1,247,462 + hemX NOLOHH_06605 0.31 +0.9 1,247,625 - hemX NOLOHH_06605 0.45 +0.5 1,247,802 - hemX NOLOHH_06605 0.59 +1.2 1,247,831 + hemX NOLOHH_06605 0.61 -1.2 1,247,904 + hemX NOLOHH_06605 0.67 +1.0 1,247,904 + hemX NOLOHH_06605 0.67 -1.2 1,247,904 + hemX NOLOHH_06605 0.67 -0.3 1,247,904 + hemX NOLOHH_06605 0.67 -0.6 1,247,904 + hemX NOLOHH_06605 0.67 -0.5 1,247,904 + hemX NOLOHH_06605 0.67 +0.6 1,247,905 - hemX NOLOHH_06605 0.67 +0.1 1,247,905 - hemX NOLOHH_06605 0.67 -0.3 1,247,905 - hemX NOLOHH_06605 0.67 -1.1 1,247,905 - hemX NOLOHH_06605 0.67 +0.9 1,247,905 - hemX NOLOHH_06605 0.67 +0.5 1,247,905 - hemX NOLOHH_06605 0.67 -0.8 1,247,905 - hemX NOLOHH_06605 0.67 -0.5 1,247,905 - hemX NOLOHH_06605 0.67 -0.2 1,247,905 - hemX NOLOHH_06605 0.67 +0.2 1,247,918 + hemX NOLOHH_06605 0.68 -0.7 1,247,953 + hemX NOLOHH_06605 0.71 -0.5 1,247,954 - hemX NOLOHH_06605 0.71 -0.1 1,247,976 + hemX NOLOHH_06605 0.73 +0.7 1,247,976 + hemX NOLOHH_06605 0.73 -0.9 1,247,977 - hemX NOLOHH_06605 0.73 +0.5 1,247,977 - hemX NOLOHH_06605 0.73 +0.8 1,248,018 + hemX NOLOHH_06605 0.76 +0.3 1,248,018 + hemX NOLOHH_06605 0.76 +0.1 1,248,019 - hemX NOLOHH_06605 0.77 +0.2 1,248,019 - hemX NOLOHH_06605 0.77 -0.5 1,248,021 + hemX NOLOHH_06605 0.77 +0.1 1,248,021 + hemX NOLOHH_06605 0.77 -0.3 1,248,022 - hemX NOLOHH_06605 0.77 +1.5 1,248,022 - hemX NOLOHH_06605 0.77 +0.5
Or see this region's nucleotide sequence