Strain Fitness in Escherichia coli ECOR27 around NOLOHH_05700

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,060,270	+	sthA	NOLOHH_05695	0.38	+2.3
1,060,270	+	sthA	NOLOHH_05695	0.38	+0.9
1,060,271	-	sthA	NOLOHH_05695	0.38	+0.3
1,060,271	-	sthA	NOLOHH_05695	0.38	+0.3
1,060,271	-	sthA	NOLOHH_05695	0.38	-0.3
1,060,274	+	sthA	NOLOHH_05695	0.38	+0.3
1,060,274	+	sthA	NOLOHH_05695	0.38	+0.3
1,060,274	+	sthA	NOLOHH_05695	0.38	+0.3
1,060,274	+	sthA	NOLOHH_05695	0.38	+0.3
1,060,275	-	sthA	NOLOHH_05695	0.39	+0.6
1,060,275	-	sthA	NOLOHH_05695	0.39	-0.7
1,060,275	-	sthA	NOLOHH_05695	0.39	-1.3
1,060,275	-	sthA	NOLOHH_05695	0.39	+0.3
1,060,275	-	sthA	NOLOHH_05695	0.39	+0.6
1,060,275	-	sthA	NOLOHH_05695	0.39	+0.3
1,060,275	-	sthA	NOLOHH_05695	0.39	+0.3
1,060,279	-	sthA	NOLOHH_05695	0.39	+0.3
1,060,305	+	sthA	NOLOHH_05695	0.41	-0.0
1,060,305	+	sthA	NOLOHH_05695	0.41	-1.7
1,060,305	+	sthA	NOLOHH_05695	0.41	-0.7
1,060,533	+	sthA	NOLOHH_05695	0.57	+0.3
1,060,534	-	sthA	NOLOHH_05695	0.57	+1.3
1,060,629	+	sthA	NOLOHH_05695	0.64	+1.9
1,060,629	+	sthA	NOLOHH_05695	0.64	+1.3
1,060,629	+	sthA	NOLOHH_05695	0.64	+2.3
1,060,630	-	sthA	NOLOHH_05695	0.64	+1.6
1,060,630	-	sthA	NOLOHH_05695	0.64	+1.3
1,060,654	-	sthA	NOLOHH_05695	0.66	+0.9
1,060,736	-	sthA	NOLOHH_05695	0.71	+0.9
1,060,785	+	sthA	NOLOHH_05695	0.75	-2.3
1,060,786	-	sthA	NOLOHH_05695	0.75	-0.2
1,060,851	+	sthA	NOLOHH_05695	0.80	-0.7
1,060,851	+	sthA	NOLOHH_05695	0.80	+1.0
1,060,875	-	sthA	NOLOHH_05695	0.81	+0.3
1,060,995	-	sthA	NOLOHH_05695	0.90	+0.9
1,061,015	+				-0.3
1,061,049	+				-0.7
1,061,069	+				-0.7
1,061,069	+				-1.3
1,061,070	-				-0.3
1,061,120	-				-1.3
1,061,191	+				-0.9
1,061,234	+	oxyR	NOLOHH_05700	0.13	-1.3
1,061,235	-	oxyR	NOLOHH_05700	0.13	+0.5
1,061,255	+	oxyR	NOLOHH_05700	0.15	-1.1
1,061,256	-	oxyR	NOLOHH_05700	0.15	-0.3
1,061,320	-	oxyR	NOLOHH_05700	0.22	-0.8
1,061,387	+	oxyR	NOLOHH_05700	0.29	-0.5
1,061,387	+	oxyR	NOLOHH_05700	0.29	+0.1
1,061,387	+	oxyR	NOLOHH_05700	0.29	-0.1
1,061,388	-	oxyR	NOLOHH_05700	0.29	-0.1
1,061,388	-	oxyR	NOLOHH_05700	0.29	+1.3
1,061,527	+	oxyR	NOLOHH_05700	0.45	+0.3
1,061,528	-	oxyR	NOLOHH_05700	0.45	+0.3
1,061,528	-	oxyR	NOLOHH_05700	0.45	-0.2
1,061,528	-	oxyR	NOLOHH_05700	0.45	+0.7
1,061,528	-	oxyR	NOLOHH_05700	0.45	-0.0
1,061,528	-	oxyR	NOLOHH_05700	0.45	-0.1
1,061,528	-	oxyR	NOLOHH_05700	0.45	-0.2
1,061,532	-	oxyR	NOLOHH_05700	0.45	+0.4
1,061,532	-	oxyR	NOLOHH_05700	0.45	+0.1
1,061,532	-	oxyR	NOLOHH_05700	0.45	-0.2
1,061,669	-	oxyR	NOLOHH_05700	0.60	+0.8
1,061,669	-	oxyR	NOLOHH_05700	0.60	+0.9
1,061,669	-	oxyR	NOLOHH_05700	0.60	-0.0
1,061,709	-	oxyR	NOLOHH_05700	0.64	-1.3
1,061,712	-	oxyR	NOLOHH_05700	0.65	-0.2
1,061,712	-	oxyR	NOLOHH_05700	0.65	-0.1
1,061,712	-	oxyR	NOLOHH_05700	0.65	+1.0
1,061,712	-	oxyR	NOLOHH_05700	0.65	-0.1
1,061,712	-	oxyR	NOLOHH_05700	0.65	+0.3
1,061,824	-	oxyR	NOLOHH_05700	0.77	-1.8
1,061,842	-	oxyR	NOLOHH_05700	0.79	-0.7
1,061,842	-	oxyR	NOLOHH_05700	0.79	+0.3
1,061,925	-	oxyR	NOLOHH_05700	0.88	-0.4
1,062,013	+				+0.7
1,062,014	-				+0.4
1,062,014	-				+0.2
1,062,029	+				-0.5
1,062,030	-				-0.9
1,062,075	+				-0.5
1,062,152	+				+0.1
1,062,152	+				+0.9
1,062,197	+				-0.2
1,062,197	+				-0.2
1,062,198	-				-0.9
1,062,201	+				-0.4
1,062,202	-				-0.5
1,062,202	-				-1.5
1,062,247	+				-0.7
1,062,248	-				-0.2
1,062,253	-				-0.9
1,062,279	-				+0.8
1,062,279	-				+0.1
1,062,279	-				+1.0
1,062,282	-				-0.1
1,062,310	+				-0.2
1,062,311	-				+0.1
1,062,318	+				-1.3
1,062,318	+				+0.3
1,062,319	-				+0.1
1,062,319	-				-0.7
1,062,551	-		NOLOHH_05710	0.21	+0.1
1,062,551	-		NOLOHH_05710	0.21	-0.8
1,062,551	-		NOLOHH_05710	0.21	+0.1
1,062,691	+		NOLOHH_05710	0.31	+1.3
1,062,822	+		NOLOHH_05710	0.42	+0.9
1,062,822	+		NOLOHH_05710	0.42	-1.3
1,062,823	-		NOLOHH_05710	0.42	+0.6
1,062,823	-		NOLOHH_05710	0.42	+0.5
1,062,823	-		NOLOHH_05710	0.42	-1.6
1,062,823	-		NOLOHH_05710	0.42	+0.0
1,062,842	+		NOLOHH_05710	0.43	-0.0
1,062,872	-		NOLOHH_05710	0.46	+0.3
1,062,933	+		NOLOHH_05710	0.50	-0.4
1,062,933	+		NOLOHH_05710	0.50	+0.4
1,062,933	+		NOLOHH_05710	0.50	-0.0
1,062,934	-		NOLOHH_05710	0.50	+1.3
1,062,934	-		NOLOHH_05710	0.50	+0.9
1,062,934	-		NOLOHH_05710	0.50	+0.3
1,062,934	-		NOLOHH_05710	0.50	-0.4