Strain Fitness in Escherichia coli ECOR27 around NOLOHH_00825
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
50,003 | + | -0.6 | |||
50,003 | + | -0.7 | |||
50,026 | - | +1.7 | |||
50,209 | - | purE | NOLOHH_00825 | 0.39 | -1.3 |
50,323 | + | purE | NOLOHH_00825 | 0.61 | +1.2 |
50,333 | + | purE | NOLOHH_00825 | 0.63 | +0.0 |
50,334 | - | purE | NOLOHH_00825 | 0.63 | -0.8 |
50,334 | - | purE | NOLOHH_00825 | 0.63 | -0.4 |
50,442 | - | purE | NOLOHH_00825 | 0.85 | -0.6 |
50,552 | - | +0.6 | |||
50,558 | + | +0.9 | |||
50,559 | - | +1.2 | |||
50,812 | + | purK | NOLOHH_00830 | 0.28 | +0.1 |
50,812 | + | purK | NOLOHH_00830 | 0.28 | -0.3 |
50,812 | + | purK | NOLOHH_00830 | 0.28 | -0.3 |
50,813 | - | purK | NOLOHH_00830 | 0.28 | -0.4 |
50,854 | + | purK | NOLOHH_00830 | 0.32 | +1.0 |
50,873 | + | purK | NOLOHH_00830 | 0.33 | +0.9 |
50,966 | + | purK | NOLOHH_00830 | 0.42 | -0.2 |
50,966 | + | purK | NOLOHH_00830 | 0.42 | -1.8 |
50,966 | + | purK | NOLOHH_00830 | 0.42 | +0.4 |
50,966 | + | purK | NOLOHH_00830 | 0.42 | +0.4 |
50,967 | - | purK | NOLOHH_00830 | 0.42 | -1.1 |
50,967 | - | purK | NOLOHH_00830 | 0.42 | -2.0 |
50,985 | - | purK | NOLOHH_00830 | 0.44 | +0.4 |
51,060 | - | purK | NOLOHH_00830 | 0.51 | +1.4 |
51,077 | + | purK | NOLOHH_00830 | 0.52 | +1.6 |
51,171 | + | purK | NOLOHH_00830 | 0.61 | -0.7 |
51,172 | - | purK | NOLOHH_00830 | 0.61 | -1.0 |
51,348 | - | purK | NOLOHH_00830 | 0.78 | +0.4 |
51,348 | - | purK | NOLOHH_00830 | 0.78 | -0.6 |
Or see this region's nucleotide sequence