Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_16845 and rhaT are separated by 72 nucleotides rhaT and OKGIIK_16855 are separated by 60 nucleotides OKGIIK_16855 and OKGIIK_16860 are separated by 217 nucleotides
OKGIIK_16845: OKGIIK_16845 - Protein-disulfide reductase, at 3,693,046 to 3,695,235
_16845
OKGIIK_16850: rhaT - EamA family transporter, at 3,695,308 to 3,696,204
rhaT
OKGIIK_16855: OKGIIK_16855 - Cation tolerance protein, at 3,696,265 to 3,696,618
_16855
OKGIIK_16860: OKGIIK_16860 - Co-chaperonin GroES, at 3,696,836 to 3,697,129
_16860
Position (kb)
3695
3696
3697 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3694.581 kb on - strand, within OKGIIK_16845 at 3694.947 kb on - strand, within OKGIIK_16845 at 3695.270 kb on + strand at 3695.271 kb on - strand at 3695.271 kb on - strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.309 kb on + strand at 3695.310 kb on - strand at 3695.310 kb on - strand at 3695.474 kb on + strand, within rhaT at 3695.474 kb on + strand, within rhaT at 3695.475 kb on - strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.534 kb on + strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.535 kb on - strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.708 kb on + strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.709 kb on - strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.726 kb on + strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3695.727 kb on - strand, within rhaT at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.314 kb on + strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.315 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.366 kb on - strand, within OKGIIK_16855 at 3696.473 kb on + strand, within OKGIIK_16855 at 3696.474 kb on - strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.578 kb on + strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.579 kb on - strand, within OKGIIK_16855 at 3696.629 kb on + strand at 3696.629 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.689 kb on + strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.690 kb on - strand at 3696.740 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,694,581 - OKGIIK_16845 0.70 +0.7 3,694,947 - OKGIIK_16845 0.87 -1.9 3,695,270 + +0.0 3,695,271 - -0.5 3,695,271 - +0.1 3,695,309 + -0.9 3,695,309 + -0.1 3,695,309 + +0.1 3,695,309 + -3.4 3,695,309 + -0.5 3,695,309 + -0.4 3,695,309 + -0.2 3,695,309 + -0.7 3,695,309 + +0.0 3,695,309 + -0.0 3,695,309 + +0.1 3,695,309 + +0.1 3,695,310 - -2.2 3,695,310 - -0.9 3,695,474 + rhaT OKGIIK_16850 0.19 -2.6 3,695,474 + rhaT OKGIIK_16850 0.19 -0.2 3,695,475 - rhaT OKGIIK_16850 0.19 +0.1 3,695,534 + rhaT OKGIIK_16850 0.25 +0.7 3,695,534 + rhaT OKGIIK_16850 0.25 -1.4 3,695,534 + rhaT OKGIIK_16850 0.25 +0.8 3,695,534 + rhaT OKGIIK_16850 0.25 +0.7 3,695,534 + rhaT OKGIIK_16850 0.25 -0.0 3,695,534 + rhaT OKGIIK_16850 0.25 -0.6 3,695,534 + rhaT OKGIIK_16850 0.25 +0.4 3,695,535 - rhaT OKGIIK_16850 0.25 +0.0 3,695,535 - rhaT OKGIIK_16850 0.25 +0.4 3,695,535 - rhaT OKGIIK_16850 0.25 +0.3 3,695,535 - rhaT OKGIIK_16850 0.25 +0.4 3,695,535 - rhaT OKGIIK_16850 0.25 +1.1 3,695,535 - rhaT OKGIIK_16850 0.25 -0.9 3,695,535 - rhaT OKGIIK_16850 0.25 +0.6 3,695,535 - rhaT OKGIIK_16850 0.25 -2.9 3,695,535 - rhaT OKGIIK_16850 0.25 -0.8 3,695,535 - rhaT OKGIIK_16850 0.25 +0.8 3,695,535 - rhaT OKGIIK_16850 0.25 -2.2 3,695,535 - rhaT OKGIIK_16850 0.25 -0.2 3,695,708 + rhaT OKGIIK_16850 0.45 -2.2 3,695,708 + rhaT OKGIIK_16850 0.45 +1.6 3,695,708 + rhaT OKGIIK_16850 0.45 -0.6 3,695,708 + rhaT OKGIIK_16850 0.45 -0.2 3,695,708 + rhaT OKGIIK_16850 0.45 -0.1 3,695,708 + rhaT OKGIIK_16850 0.45 -3.1 3,695,708 + rhaT OKGIIK_16850 0.45 -1.5 3,695,708 + rhaT OKGIIK_16850 0.45 +0.2 3,695,709 - rhaT OKGIIK_16850 0.45 -1.0 3,695,709 - rhaT OKGIIK_16850 0.45 -0.5 3,695,709 - rhaT OKGIIK_16850 0.45 +0.5 3,695,709 - rhaT OKGIIK_16850 0.45 +1.4 3,695,709 - rhaT OKGIIK_16850 0.45 +0.5 3,695,709 - rhaT OKGIIK_16850 0.45 -0.3 3,695,726 + rhaT OKGIIK_16850 0.47 -0.2 3,695,726 + rhaT OKGIIK_16850 0.47 +0.4 3,695,726 + rhaT OKGIIK_16850 0.47 +0.1 3,695,726 + rhaT OKGIIK_16850 0.47 -0.9 3,695,727 - rhaT OKGIIK_16850 0.47 +0.6 3,695,727 - rhaT OKGIIK_16850 0.47 +1.0 3,695,727 - rhaT OKGIIK_16850 0.47 -1.7 3,695,727 - rhaT OKGIIK_16850 0.47 +0.7 3,695,727 - rhaT OKGIIK_16850 0.47 -0.2 3,696,314 + OKGIIK_16855 0.14 +0.6 3,696,314 + OKGIIK_16855 0.14 -1.1 3,696,315 - OKGIIK_16855 0.14 -0.5 3,696,315 - OKGIIK_16855 0.14 -1.2 3,696,366 - OKGIIK_16855 0.29 -0.3 3,696,366 - OKGIIK_16855 0.29 -1.7 3,696,366 - OKGIIK_16855 0.29 -0.7 3,696,366 - OKGIIK_16855 0.29 -1.5 3,696,473 + OKGIIK_16855 0.59 -0.8 3,696,474 - OKGIIK_16855 0.59 -1.6 3,696,578 + OKGIIK_16855 0.88 +0.7 3,696,578 + OKGIIK_16855 0.88 -1.1 3,696,578 + OKGIIK_16855 0.88 -1.4 3,696,578 + OKGIIK_16855 0.88 -1.6 3,696,578 + OKGIIK_16855 0.88 -0.1 3,696,578 + OKGIIK_16855 0.88 +0.7 3,696,578 + OKGIIK_16855 0.88 -0.2 3,696,579 - OKGIIK_16855 0.89 +0.1 3,696,579 - OKGIIK_16855 0.89 -2.1 3,696,579 - OKGIIK_16855 0.89 -0.2 3,696,579 - OKGIIK_16855 0.89 +0.1 3,696,579 - OKGIIK_16855 0.89 +0.3 3,696,579 - OKGIIK_16855 0.89 +0.9 3,696,579 - OKGIIK_16855 0.89 -0.0 3,696,629 + +1.8 3,696,629 + +0.3 3,696,689 + -0.4 3,696,689 + +0.4 3,696,689 + -0.2 3,696,689 + -0.9 3,696,689 + -0.1 3,696,689 + -0.5 3,696,689 + -0.0 3,696,689 + +0.0 3,696,689 + -0.5 3,696,689 + -0.1 3,696,689 + -0.9 3,696,689 + +0.1 3,696,689 + +0.6 3,696,689 + +0.1 3,696,690 - -1.8 3,696,690 - -0.6 3,696,690 - +0.6 3,696,690 - +1.0 3,696,690 - +1.4 3,696,690 - -0.5 3,696,690 - -0.4 3,696,690 - +0.5 3,696,690 - -2.1 3,696,690 - -0.5 3,696,690 - +0.2 3,696,690 - -0.1 3,696,690 - +0.3 3,696,690 - -0.3 3,696,740 + +0.9
Or see this region's nucleotide sequence