Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_15130 and OKGIIK_15135 are separated by 84 nucleotides OKGIIK_15135 and yhcF are separated by 123 nucleotides yhcF and ccmA are separated by 1 nucleotides
OKGIIK_15130: OKGIIK_15130 - Patatin, at 3,289,373 to 3,290,281
_15130
OKGIIK_15135: OKGIIK_15135 - Peptidase S9, at 3,290,366 to 3,292,423
_15135
OKGIIK_15140: yhcF - GntR family transcriptional regulator, at 3,292,547 to 3,292,930
yhcF
OKGIIK_15145: ccmA - ABC transporter ATP-binding protein, at 3,292,932 to 3,293,825
ccmA
Position (kb) 3290
3291
3292
3293 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3289.619 kb on + strand, within OKGIIK_15130 at 3289.619 kb on + strand, within OKGIIK_15130 at 3289.619 kb on + strand, within OKGIIK_15130 at 3289.619 kb on + strand, within OKGIIK_15130 at 3289.619 kb on + strand, within OKGIIK_15130 at 3289.620 kb on - strand, within OKGIIK_15130 at 3289.620 kb on - strand, within OKGIIK_15130 at 3289.620 kb on - strand, within OKGIIK_15130 at 3289.620 kb on - strand, within OKGIIK_15130 at 3289.620 kb on - strand, within OKGIIK_15130 at 3289.739 kb on + strand, within OKGIIK_15130 at 3289.739 kb on + strand, within OKGIIK_15130 at 3289.739 kb on + strand, within OKGIIK_15130 at 3289.739 kb on + strand, within OKGIIK_15130 at 3289.739 kb on + strand, within OKGIIK_15130 at 3289.740 kb on - strand, within OKGIIK_15130 at 3289.740 kb on - strand, within OKGIIK_15130 at 3289.740 kb on - strand, within OKGIIK_15130 at 3289.740 kb on - strand, within OKGIIK_15130 at 3289.922 kb on + strand, within OKGIIK_15130 at 3289.922 kb on + strand, within OKGIIK_15130 at 3289.922 kb on + strand, within OKGIIK_15130 at 3289.922 kb on + strand, within OKGIIK_15130 at 3289.922 kb on + strand, within OKGIIK_15130 at 3289.923 kb on - strand, within OKGIIK_15130 at 3289.923 kb on - strand, within OKGIIK_15130 at 3289.923 kb on - strand, within OKGIIK_15130 at 3290.332 kb on + strand at 3290.333 kb on - strand at 3290.333 kb on - strand at 3290.381 kb on + strand at 3290.381 kb on + strand at 3290.381 kb on + strand at 3290.381 kb on + strand at 3290.382 kb on - strand at 3290.396 kb on + strand at 3290.744 kb on + strand, within OKGIIK_15135 at 3290.744 kb on + strand, within OKGIIK_15135 at 3290.744 kb on + strand, within OKGIIK_15135 at 3290.744 kb on + strand, within OKGIIK_15135 at 3290.745 kb on - strand, within OKGIIK_15135 at 3290.745 kb on - strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.801 kb on + strand, within OKGIIK_15135 at 3290.802 kb on - strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.852 kb on + strand, within OKGIIK_15135 at 3290.853 kb on - strand, within OKGIIK_15135 at 3290.853 kb on - strand, within OKGIIK_15135 at 3290.853 kb on - strand, within OKGIIK_15135 at 3290.853 kb on - strand, within OKGIIK_15135 at 3290.853 kb on - strand, within OKGIIK_15135 at 3291.002 kb on + strand, within OKGIIK_15135 at 3291.002 kb on + strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.003 kb on - strand, within OKGIIK_15135 at 3291.009 kb on - strand, within OKGIIK_15135 at 3291.047 kb on + strand, within OKGIIK_15135 at 3291.048 kb on - strand, within OKGIIK_15135 at 3291.048 kb on - strand, within OKGIIK_15135 at 3291.098 kb on + strand, within OKGIIK_15135 at 3291.098 kb on + strand, within OKGIIK_15135 at 3291.098 kb on + strand, within OKGIIK_15135 at 3291.099 kb on - strand, within OKGIIK_15135 at 3291.099 kb on - strand, within OKGIIK_15135 at 3291.099 kb on - strand, within OKGIIK_15135 at 3291.099 kb on - strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.275 kb on + strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.276 kb on - strand, within OKGIIK_15135 at 3291.413 kb on + strand, within OKGIIK_15135 at 3291.413 kb on + strand, within OKGIIK_15135 at 3291.414 kb on - strand, within OKGIIK_15135 at 3291.414 kb on - strand, within OKGIIK_15135 at 3291.549 kb on - strand, within OKGIIK_15135 at 3291.549 kb on - strand, within OKGIIK_15135 at 3291.714 kb on - strand, within OKGIIK_15135 at 3291.714 kb on - strand, within OKGIIK_15135 at 3291.714 kb on - strand, within OKGIIK_15135 at 3291.830 kb on + strand, within OKGIIK_15135 at 3291.831 kb on - strand, within OKGIIK_15135 at 3291.960 kb on - strand, within OKGIIK_15135 at 3292.004 kb on + strand, within OKGIIK_15135 at 3292.004 kb on + strand, within OKGIIK_15135 at 3292.004 kb on + strand, within OKGIIK_15135 at 3292.005 kb on - strand, within OKGIIK_15135 at 3292.005 kb on - strand, within OKGIIK_15135 at 3292.005 kb on - strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.094 kb on + strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.095 kb on - strand, within OKGIIK_15135 at 3292.097 kb on + strand, within OKGIIK_15135 at 3292.152 kb on - strand, within OKGIIK_15135 at 3292.152 kb on - strand, within OKGIIK_15135 at 3292.169 kb on + strand, within OKGIIK_15135 at 3292.170 kb on - strand, within OKGIIK_15135 at 3292.170 kb on - strand, within OKGIIK_15135 at 3292.170 kb on - strand, within OKGIIK_15135 at 3292.323 kb on - strand at 3292.403 kb on + strand at 3292.403 kb on + strand at 3292.404 kb on - strand at 3292.417 kb on + strand at 3292.417 kb on + strand at 3292.417 kb on + strand at 3292.417 kb on + strand at 3292.418 kb on - strand at 3292.418 kb on - strand at 3292.418 kb on - strand at 3292.421 kb on + strand at 3292.421 kb on + strand at 3292.422 kb on - strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.569 kb on + strand at 3292.570 kb on - strand at 3292.570 kb on - strand at 3292.570 kb on - strand at 3292.570 kb on - strand at 3292.570 kb on - strand at 3292.591 kb on + strand, within yhcF at 3292.591 kb on + strand, within yhcF at 3292.591 kb on + strand, within yhcF at 3292.591 kb on + strand, within yhcF at 3292.591 kb on + strand, within yhcF at 3292.592 kb on - strand, within yhcF at 3292.592 kb on - strand, within yhcF at 3292.592 kb on - strand, within yhcF at 3292.592 kb on - strand, within yhcF at 3292.592 kb on - strand, within yhcF at 3292.595 kb on + strand, within yhcF at 3292.596 kb on - strand, within yhcF at 3292.644 kb on + strand, within yhcF at 3292.644 kb on + strand, within yhcF at 3292.644 kb on + strand, within yhcF at 3292.645 kb on - strand, within yhcF at 3292.645 kb on - strand, within yhcF at 3292.671 kb on + strand, within yhcF at 3292.725 kb on - strand, within yhcF at 3292.725 kb on - strand, within yhcF at 3293.001 kb on + strand at 3293.002 kb on - strand at 3293.002 kb on - strand at 3293.202 kb on + strand, within ccmA at 3293.202 kb on + strand, within ccmA at 3293.202 kb on + strand, within ccmA at 3293.202 kb on + strand, within ccmA at 3293.203 kb on - strand, within ccmA at 3293.203 kb on - strand, within ccmA at 3293.203 kb on - strand, within ccmA at 3293.203 kb on - strand, within ccmA at 3293.275 kb on - strand, within ccmA
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,289,619 + OKGIIK_15130 0.27 -0.2 3,289,619 + OKGIIK_15130 0.27 -0.3 3,289,619 + OKGIIK_15130 0.27 +1.0 3,289,619 + OKGIIK_15130 0.27 -2.0 3,289,619 + OKGIIK_15130 0.27 -0.3 3,289,620 - OKGIIK_15130 0.27 -0.5 3,289,620 - OKGIIK_15130 0.27 -2.0 3,289,620 - OKGIIK_15130 0.27 -1.0 3,289,620 - OKGIIK_15130 0.27 +0.5 3,289,620 - OKGIIK_15130 0.27 -0.8 3,289,739 + OKGIIK_15130 0.40 +0.1 3,289,739 + OKGIIK_15130 0.40 +0.5 3,289,739 + OKGIIK_15130 0.40 +1.0 3,289,739 + OKGIIK_15130 0.40 +0.6 3,289,739 + OKGIIK_15130 0.40 -0.8 3,289,740 - OKGIIK_15130 0.40 -0.8 3,289,740 - OKGIIK_15130 0.40 +1.9 3,289,740 - OKGIIK_15130 0.40 -1.8 3,289,740 - OKGIIK_15130 0.40 +0.5 3,289,922 + OKGIIK_15130 0.60 +0.2 3,289,922 + OKGIIK_15130 0.60 +0.0 3,289,922 + OKGIIK_15130 0.60 -2.9 3,289,922 + OKGIIK_15130 0.60 -1.0 3,289,922 + OKGIIK_15130 0.60 +1.5 3,289,923 - OKGIIK_15130 0.61 -0.3 3,289,923 - OKGIIK_15130 0.61 +0.3 3,289,923 - OKGIIK_15130 0.61 +0.2 3,290,332 + -2.4 3,290,333 - -0.5 3,290,333 - -0.6 3,290,381 + -1.0 3,290,381 + -0.1 3,290,381 + -2.1 3,290,381 + -0.2 3,290,382 - -0.4 3,290,396 + -1.0 3,290,744 + OKGIIK_15135 0.18 +0.8 3,290,744 + OKGIIK_15135 0.18 -0.3 3,290,744 + OKGIIK_15135 0.18 -0.1 3,290,744 + OKGIIK_15135 0.18 +1.3 3,290,745 - OKGIIK_15135 0.18 -0.2 3,290,745 - OKGIIK_15135 0.18 -0.3 3,290,801 + OKGIIK_15135 0.21 -0.1 3,290,801 + OKGIIK_15135 0.21 +0.2 3,290,801 + OKGIIK_15135 0.21 -0.2 3,290,801 + OKGIIK_15135 0.21 +1.8 3,290,801 + OKGIIK_15135 0.21 -1.4 3,290,801 + OKGIIK_15135 0.21 +0.4 3,290,801 + OKGIIK_15135 0.21 -0.3 3,290,802 - OKGIIK_15135 0.21 +0.7 3,290,852 + OKGIIK_15135 0.24 +0.4 3,290,852 + OKGIIK_15135 0.24 -2.5 3,290,852 + OKGIIK_15135 0.24 -1.1 3,290,852 + OKGIIK_15135 0.24 -1.0 3,290,852 + OKGIIK_15135 0.24 -1.1 3,290,852 + OKGIIK_15135 0.24 +0.1 3,290,852 + OKGIIK_15135 0.24 -0.6 3,290,852 + OKGIIK_15135 0.24 -0.3 3,290,853 - OKGIIK_15135 0.24 -2.0 3,290,853 - OKGIIK_15135 0.24 -1.8 3,290,853 - OKGIIK_15135 0.24 +0.3 3,290,853 - OKGIIK_15135 0.24 -1.6 3,290,853 - OKGIIK_15135 0.24 -1.8 3,291,002 + OKGIIK_15135 0.31 +1.2 3,291,002 + OKGIIK_15135 0.31 +0.5 3,291,003 - OKGIIK_15135 0.31 +1.3 3,291,003 - OKGIIK_15135 0.31 -2.0 3,291,003 - OKGIIK_15135 0.31 -0.2 3,291,003 - OKGIIK_15135 0.31 -0.5 3,291,003 - OKGIIK_15135 0.31 +0.8 3,291,003 - OKGIIK_15135 0.31 +1.0 3,291,003 - OKGIIK_15135 0.31 +0.3 3,291,003 - OKGIIK_15135 0.31 +0.6 3,291,003 - OKGIIK_15135 0.31 +0.5 3,291,003 - OKGIIK_15135 0.31 -1.2 3,291,009 - OKGIIK_15135 0.31 -2.5 3,291,047 + OKGIIK_15135 0.33 -1.3 3,291,048 - OKGIIK_15135 0.33 -1.0 3,291,048 - OKGIIK_15135 0.33 +1.0 3,291,098 + OKGIIK_15135 0.36 -1.5 3,291,098 + OKGIIK_15135 0.36 -0.3 3,291,098 + OKGIIK_15135 0.36 +1.0 3,291,099 - OKGIIK_15135 0.36 +0.4 3,291,099 - OKGIIK_15135 0.36 +0.2 3,291,099 - OKGIIK_15135 0.36 +0.5 3,291,099 - OKGIIK_15135 0.36 -1.4 3,291,275 + OKGIIK_15135 0.44 -0.7 3,291,275 + OKGIIK_15135 0.44 +2.0 3,291,275 + OKGIIK_15135 0.44 -1.5 3,291,275 + OKGIIK_15135 0.44 +0.5 3,291,275 + OKGIIK_15135 0.44 +0.0 3,291,275 + OKGIIK_15135 0.44 -1.0 3,291,275 + OKGIIK_15135 0.44 +1.4 3,291,275 + OKGIIK_15135 0.44 -1.0 3,291,275 + OKGIIK_15135 0.44 +0.9 3,291,275 + OKGIIK_15135 0.44 +0.9 3,291,275 + OKGIIK_15135 0.44 +0.4 3,291,275 + OKGIIK_15135 0.44 -0.7 3,291,275 + OKGIIK_15135 0.44 -0.4 3,291,275 + OKGIIK_15135 0.44 -1.5 3,291,275 + OKGIIK_15135 0.44 -1.3 3,291,276 - OKGIIK_15135 0.44 +0.5 3,291,276 - OKGIIK_15135 0.44 -2.4 3,291,276 - OKGIIK_15135 0.44 -0.2 3,291,276 - OKGIIK_15135 0.44 +0.2 3,291,276 - OKGIIK_15135 0.44 +1.4 3,291,276 - OKGIIK_15135 0.44 -1.1 3,291,413 + OKGIIK_15135 0.51 -1.4 3,291,413 + OKGIIK_15135 0.51 +2.6 3,291,414 - OKGIIK_15135 0.51 -1.0 3,291,414 - OKGIIK_15135 0.51 -1.2 3,291,549 - OKGIIK_15135 0.57 +0.4 3,291,549 - OKGIIK_15135 0.57 -0.1 3,291,714 - OKGIIK_15135 0.66 +0.4 3,291,714 - OKGIIK_15135 0.66 +1.0 3,291,714 - OKGIIK_15135 0.66 -0.6 3,291,830 + OKGIIK_15135 0.71 -0.1 3,291,831 - OKGIIK_15135 0.71 -0.9 3,291,960 - OKGIIK_15135 0.77 +0.6 3,292,004 + OKGIIK_15135 0.80 -0.6 3,292,004 + OKGIIK_15135 0.80 -0.0 3,292,004 + OKGIIK_15135 0.80 +0.6 3,292,005 - OKGIIK_15135 0.80 -0.4 3,292,005 - OKGIIK_15135 0.80 -0.5 3,292,005 - OKGIIK_15135 0.80 +0.0 3,292,094 + OKGIIK_15135 0.84 -1.0 3,292,094 + OKGIIK_15135 0.84 +0.5 3,292,094 + OKGIIK_15135 0.84 -0.6 3,292,094 + OKGIIK_15135 0.84 +0.6 3,292,094 + OKGIIK_15135 0.84 -1.1 3,292,094 + OKGIIK_15135 0.84 +0.6 3,292,094 + OKGIIK_15135 0.84 -0.3 3,292,094 + OKGIIK_15135 0.84 -1.2 3,292,095 - OKGIIK_15135 0.84 -0.1 3,292,095 - OKGIIK_15135 0.84 -0.3 3,292,095 - OKGIIK_15135 0.84 +0.6 3,292,095 - OKGIIK_15135 0.84 -0.8 3,292,095 - OKGIIK_15135 0.84 +1.2 3,292,095 - OKGIIK_15135 0.84 -1.6 3,292,095 - OKGIIK_15135 0.84 +0.8 3,292,095 - OKGIIK_15135 0.84 +0.4 3,292,095 - OKGIIK_15135 0.84 -0.1 3,292,095 - OKGIIK_15135 0.84 -0.5 3,292,097 + OKGIIK_15135 0.84 -0.4 3,292,152 - OKGIIK_15135 0.87 -1.5 3,292,152 - OKGIIK_15135 0.87 -0.3 3,292,169 + OKGIIK_15135 0.88 -1.3 3,292,170 - OKGIIK_15135 0.88 -0.4 3,292,170 - OKGIIK_15135 0.88 +0.7 3,292,170 - OKGIIK_15135 0.88 +0.0 3,292,323 - +0.2 3,292,403 + +0.0 3,292,403 + -1.4 3,292,404 - +1.5 3,292,417 + -0.4 3,292,417 + -0.1 3,292,417 + +0.3 3,292,417 + +0.0 3,292,418 - -0.7 3,292,418 - +1.0 3,292,418 - -1.1 3,292,421 + -1.5 3,292,421 + -0.4 3,292,422 - +0.7 3,292,569 + +1.5 3,292,569 + -1.1 3,292,569 + +0.7 3,292,569 + -0.1 3,292,569 + +0.0 3,292,569 + +2.0 3,292,569 + +0.0 3,292,569 + +0.0 3,292,569 + -0.7 3,292,569 + -1.2 3,292,569 + -0.6 3,292,570 - +0.0 3,292,570 - +0.4 3,292,570 - -0.6 3,292,570 - -1.0 3,292,570 - -0.1 3,292,591 + yhcF OKGIIK_15140 0.11 +2.1 3,292,591 + yhcF OKGIIK_15140 0.11 -0.4 3,292,591 + yhcF OKGIIK_15140 0.11 -2.5 3,292,591 + yhcF OKGIIK_15140 0.11 -0.2 3,292,591 + yhcF OKGIIK_15140 0.11 +0.5 3,292,592 - yhcF OKGIIK_15140 0.12 -0.5 3,292,592 - yhcF OKGIIK_15140 0.12 +1.0 3,292,592 - yhcF OKGIIK_15140 0.12 -0.1 3,292,592 - yhcF OKGIIK_15140 0.12 -0.8 3,292,592 - yhcF OKGIIK_15140 0.12 -0.1 3,292,595 + yhcF OKGIIK_15140 0.12 -0.4 3,292,596 - yhcF OKGIIK_15140 0.13 -1.1 3,292,644 + yhcF OKGIIK_15140 0.25 -1.0 3,292,644 + yhcF OKGIIK_15140 0.25 -1.8 3,292,644 + yhcF OKGIIK_15140 0.25 +1.2 3,292,645 - yhcF OKGIIK_15140 0.26 -0.2 3,292,645 - yhcF OKGIIK_15140 0.26 -0.1 3,292,671 + yhcF OKGIIK_15140 0.32 +0.3 3,292,725 - yhcF OKGIIK_15140 0.46 +0.7 3,292,725 - yhcF OKGIIK_15140 0.46 -1.1 3,293,001 + -0.1 3,293,002 - -0.8 3,293,002 - +0.1 3,293,202 + ccmA OKGIIK_15145 0.30 +0.0 3,293,202 + ccmA OKGIIK_15145 0.30 -1.3 3,293,202 + ccmA OKGIIK_15145 0.30 -0.1 3,293,202 + ccmA OKGIIK_15145 0.30 -0.3 3,293,203 - ccmA OKGIIK_15145 0.30 +0.3 3,293,203 - ccmA OKGIIK_15145 0.30 +0.3 3,293,203 - ccmA OKGIIK_15145 0.30 +0.2 3,293,203 - ccmA OKGIIK_15145 0.30 +0.2 3,293,275 - ccmA OKGIIK_15145 0.38 +1.1
Or see this region's nucleotide sequence