Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt argD and OKGIIK_14095 are separated by 253 nucleotides OKGIIK_14095 and OKGIIK_14100 are separated by 20 nucleotides OKGIIK_14100 and OKGIIK_14105 are separated by 247 nucleotides
OKGIIK_14090: argD - aspartate aminotransferase family protein, at 3,064,117 to 3,065,517
argD
OKGIIK_14095: OKGIIK_14095 - Plasmid maintenance system killer protein, at 3,065,771 to 3,066,049
_14095
OKGIIK_14100: OKGIIK_14100 - HigA family addiction module antitoxin, at 3,066,070 to 3,066,366
_14100
OKGIIK_14105: OKGIIK_14105 - hypothetical protein, at 3,066,614 to 3,067,642
_14105
Position (kb)
3065
3066
3067 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3064.810 kb on + strand, within argD at 3064.810 kb on + strand, within argD at 3064.810 kb on + strand, within argD at 3064.811 kb on - strand, within argD at 3064.811 kb on - strand, within argD at 3064.811 kb on - strand, within argD at 3064.841 kb on - strand, within argD at 3064.841 kb on - strand, within argD at 3065.156 kb on - strand, within argD at 3065.168 kb on - strand, within argD at 3065.410 kb on + strand at 3065.410 kb on + strand at 3065.410 kb on + strand at 3065.411 kb on - strand at 3065.411 kb on - strand at 3065.411 kb on - strand at 3065.411 kb on - strand at 3065.531 kb on - strand at 3065.531 kb on - strand at 3065.744 kb on + strand at 3065.759 kb on + strand at 3065.759 kb on + strand at 3065.759 kb on + strand at 3065.764 kb on + strand at 3065.776 kb on - strand at 3065.776 kb on - strand at 3065.873 kb on + strand, within OKGIIK_14095 at 3065.873 kb on + strand, within OKGIIK_14095 at 3065.874 kb on - strand, within OKGIIK_14095 at 3065.874 kb on - strand, within OKGIIK_14095 at 3065.874 kb on - strand, within OKGIIK_14095 at 3065.874 kb on - strand, within OKGIIK_14095 at 3065.892 kb on + strand, within OKGIIK_14095 at 3066.041 kb on + strand at 3066.042 kb on - strand at 3066.042 kb on - strand at 3066.345 kb on + strand at 3066.345 kb on + strand at 3066.345 kb on + strand at 3066.392 kb on + strand at 3066.393 kb on - strand at 3066.393 kb on - strand at 3066.393 kb on - strand at 3066.393 kb on - strand at 3066.393 kb on - strand at 3066.419 kb on + strand at 3066.419 kb on + strand at 3066.419 kb on + strand at 3066.419 kb on + strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.420 kb on - strand at 3066.512 kb on + strand at 3066.512 kb on + strand at 3066.512 kb on + strand at 3066.512 kb on + strand at 3066.513 kb on - strand at 3066.513 kb on - strand at 3066.513 kb on - strand at 3066.513 kb on - strand at 3066.513 kb on - strand at 3066.513 kb on - strand at 3066.576 kb on + strand at 3066.576 kb on + strand at 3066.576 kb on + strand at 3066.576 kb on + strand at 3066.576 kb on + strand at 3066.576 kb on + strand at 3066.577 kb on - strand at 3066.577 kb on - strand at 3066.577 kb on - strand at 3066.577 kb on - strand at 3066.577 kb on - strand at 3066.577 kb on - strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.628 kb on + strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.629 kb on - strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.632 kb on + strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.633 kb on - strand at 3066.691 kb on + strand at 3066.691 kb on + strand at 3066.692 kb on - strand at 3066.692 kb on - strand at 3066.771 kb on + strand, within OKGIIK_14105 at 3066.772 kb on - strand, within OKGIIK_14105 at 3066.772 kb on - strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.850 kb on + strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.851 kb on - strand, within OKGIIK_14105 at 3066.871 kb on - strand, within OKGIIK_14105 at 3066.900 kb on + strand, within OKGIIK_14105 at 3066.992 kb on - strand, within OKGIIK_14105
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,064,810 + argD OKGIIK_14090 0.49 -2.5 3,064,810 + argD OKGIIK_14090 0.49 +0.8 3,064,810 + argD OKGIIK_14090 0.49 -0.9 3,064,811 - argD OKGIIK_14090 0.50 -2.6 3,064,811 - argD OKGIIK_14090 0.50 -1.9 3,064,811 - argD OKGIIK_14090 0.50 -0.1 3,064,841 - argD OKGIIK_14090 0.52 +0.1 3,064,841 - argD OKGIIK_14090 0.52 +0.7 3,065,156 - argD OKGIIK_14090 0.74 +0.0 3,065,168 - argD OKGIIK_14090 0.75 +0.1 3,065,410 + -2.0 3,065,410 + -1.3 3,065,410 + -0.2 3,065,411 - -1.2 3,065,411 - -0.5 3,065,411 - -1.3 3,065,411 - -1.3 3,065,531 - +1.1 3,065,531 - -0.1 3,065,744 + -1.3 3,065,759 + -1.1 3,065,759 + -2.3 3,065,759 + -0.9 3,065,764 + -0.5 3,065,776 - -1.3 3,065,776 - +0.8 3,065,873 + OKGIIK_14095 0.37 +0.6 3,065,873 + OKGIIK_14095 0.37 -1.3 3,065,874 - OKGIIK_14095 0.37 +0.3 3,065,874 - OKGIIK_14095 0.37 +0.1 3,065,874 - OKGIIK_14095 0.37 -0.3 3,065,874 - OKGIIK_14095 0.37 -0.6 3,065,892 + OKGIIK_14095 0.43 -0.4 3,066,041 + +1.3 3,066,042 - +0.4 3,066,042 - +0.7 3,066,345 + +0.3 3,066,345 + +0.5 3,066,345 + +0.3 3,066,392 + -0.9 3,066,393 - +0.7 3,066,393 - +0.4 3,066,393 - +0.9 3,066,393 - -1.3 3,066,393 - -1.3 3,066,419 + -1.2 3,066,419 + -0.6 3,066,419 + +0.8 3,066,419 + -0.7 3,066,420 - +0.1 3,066,420 - -2.6 3,066,420 - +0.6 3,066,420 - +1.3 3,066,420 - +0.5 3,066,420 - -0.7 3,066,420 - +0.1 3,066,512 + +0.6 3,066,512 + -0.5 3,066,512 + +0.3 3,066,512 + -0.3 3,066,513 - -1.3 3,066,513 - +2.1 3,066,513 - +0.1 3,066,513 - +0.1 3,066,513 - +0.5 3,066,513 - +0.6 3,066,576 + -0.6 3,066,576 + +0.8 3,066,576 + -2.7 3,066,576 + +0.4 3,066,576 + -0.3 3,066,576 + -0.3 3,066,577 - -2.0 3,066,577 - -3.0 3,066,577 - -0.8 3,066,577 - +0.5 3,066,577 - -1.8 3,066,577 - -1.4 3,066,628 + -0.0 3,066,628 + -0.9 3,066,628 + +0.3 3,066,628 + -0.3 3,066,628 + -0.1 3,066,628 + +1.1 3,066,628 + -1.9 3,066,628 + -1.3 3,066,628 + -1.4 3,066,628 + +0.5 3,066,629 - +0.7 3,066,629 - +0.9 3,066,629 - -0.1 3,066,629 - -1.2 3,066,629 - +0.8 3,066,629 - -0.4 3,066,629 - -0.2 3,066,629 - +1.1 3,066,629 - -0.9 3,066,629 - -2.1 3,066,629 - -0.0 3,066,629 - +0.1 3,066,629 - -1.0 3,066,629 - +0.6 3,066,632 + +0.2 3,066,632 + -0.3 3,066,632 + -1.4 3,066,632 + +0.6 3,066,632 + +0.4 3,066,632 + -2.3 3,066,632 + +1.1 3,066,632 + -1.9 3,066,632 + +0.6 3,066,632 + +0.1 3,066,632 + +0.2 3,066,632 + -0.4 3,066,632 + +0.3 3,066,632 + -2.8 3,066,632 + +0.3 3,066,632 + -0.1 3,066,632 + -0.3 3,066,632 + +1.7 3,066,632 + -1.3 3,066,632 + +0.4 3,066,632 + -0.7 3,066,632 + -0.2 3,066,632 + -0.9 3,066,632 + -1.1 3,066,632 + -1.7 3,066,632 + +0.6 3,066,633 - +0.2 3,066,633 - -0.4 3,066,633 - -0.9 3,066,633 - +0.3 3,066,633 - -0.2 3,066,633 - +0.6 3,066,633 - +0.3 3,066,633 - -0.1 3,066,633 - +0.2 3,066,633 - +0.1 3,066,633 - -1.1 3,066,633 - +0.9 3,066,633 - +0.3 3,066,633 - -2.5 3,066,633 - -0.9 3,066,633 - -0.0 3,066,691 + -0.7 3,066,691 + -0.1 3,066,692 - -0.3 3,066,692 - -1.3 3,066,771 + OKGIIK_14105 0.15 -0.1 3,066,772 - OKGIIK_14105 0.15 -1.6 3,066,772 - OKGIIK_14105 0.15 +0.1 3,066,850 + OKGIIK_14105 0.23 -1.3 3,066,850 + OKGIIK_14105 0.23 -0.8 3,066,850 + OKGIIK_14105 0.23 -1.5 3,066,850 + OKGIIK_14105 0.23 -0.6 3,066,850 + OKGIIK_14105 0.23 -0.5 3,066,850 + OKGIIK_14105 0.23 +0.9 3,066,851 - OKGIIK_14105 0.23 +0.5 3,066,851 - OKGIIK_14105 0.23 +0.6 3,066,851 - OKGIIK_14105 0.23 -0.5 3,066,851 - OKGIIK_14105 0.23 +1.1 3,066,851 - OKGIIK_14105 0.23 +0.9 3,066,851 - OKGIIK_14105 0.23 +1.3 3,066,871 - OKGIIK_14105 0.25 +0.3 3,066,900 + OKGIIK_14105 0.28 +1.1 3,066,992 - OKGIIK_14105 0.37 -0.0
Or see this region's nucleotide sequence